Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g51503 Chara braunii HOM05D005172 ORTHO05D006324 3.4e-115 418.3 205 100.0
Lju926A5G28 Lonicera japonica HOM05D005172 ORTHO05D006324 7.2e-17 91.7 121 36.4
Cc02_g35150 Coffea canephora HOM05D005172 ORTHO05D006324 2.8e-16 89.7 106 38.7
GSVIVG01031247001 Vitis vinifera HOM05D005172 ORTHO05D006324 6.1e-16 88.6 142 30.3
DCAR_001909 Daucus carota HOM05D005172 ORTHO05D006324 2.3e-15 86.7 126 36.5
SalBow7G2322 Salvia bowleyana HOM05D006337 ORTHO05D008050 2.3e-15 86.7 106 36.8
PSO761G0644 Papaver somniferum HOM05D005172 ORTHO05D006324 3.0e-15 86.3 178 28.1
Sabra14G0088100 Salix brachista HOM05D005172 ORTHO05D006324 3.0e-15 86.3 117 35.0
Aqoxy2G02725 Aquilegia oxysepala HOM05D005172 ORTHO05D006324 5.2e-15 85.5 130 33.1
Atru.chr5.994 Acer truncatum HOM05D005172 ORTHO05D006324 6.8e-15 85.1 121 32.2
CDE08G0763 Ceratophyllum demersum HOM05D005172 ORTHO05D006324 6.8e-15 85.1 116 35.3
CAN.G1076.20 Capsicum annuum HOM05D005172 ORTHO05D006324 8.8e-15 84.7 108 37.0
Aa31LG10G16300 Aethionema arabicum HOM05D005172 ORTHO05D006324 1.2e-14 84.3 188 27.7
Migut.B00958 Erythranthe guttata HOM05D005172 ORTHO05D006324 1.2e-14 84.3 106 36.8
Hma1.2p1_0008F-1.1_g005570 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 1.2e-14 84.3 106 35.8
Peaxi162Scf01061g00133 Petunia axillaris HOM05D005172 ORTHO05D006324 1.2e-14 84.3 148 33.8
PGR044G0670 Punica granatum HOM05D005172 ORTHO05D006324 1.2e-14 84.3 136 31.6
Solyc01g100590.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 1.2e-14 84.3 126 32.5
MSTRG.20376 Avicennia marina HOM05D005172 ORTHO05D006324 1.5e-14 84.0 117 34.2
A07p25960 Brassica napus HOM05D005172 ORTHO05D006324 1.5e-14 84.0 142 33.1
BraA07t30243Z Brassica rapa HOM05D005172 ORTHO05D006324 1.5e-14 84.0 142 33.1
Eucgr.K03551 Eucalyptus grandis HOM05D005172 ORTHO05D006324 1.5e-14 84.0 121 32.2
Manes.01G229300 Manihot esculenta HOM05D005172 ORTHO05D006324 1.5e-14 84.0 160 28.8
Sopen01g044090 Solanum pennellii HOM05D005172 ORTHO05D006324 1.5e-14 84.0 126 32.5
Zm00001eb014830 Zea mays HOM05D005172 ORTHO05D006324 1.5e-14 84.0 136 33.8
Gohir.A07G129100 Gossypium hirsutum HOM05D005172 ORTHO05D006324 2.0e-14 83.6 144 32.6
SalBow3G3203 Salvia bowleyana HOM05D005172 ORTHO05D006324 2.0e-14 83.6 126 34.1
PGSC0003DMG400002764 Solanum tuberosum HOM05D005172 ORTHO05D006324 2.0e-14 83.6 136 30.9
AT3G62370 Arabidopsis thaliana HOM05D005172 ORTHO05D006324 2.6e-14 83.2 137 30.7
CSS0017820 Camellia sinensis var. sinensis HOM05D005172 ORTHO05D006324 2.6e-14 83.2 131 34.4
FvH4_2g00030 Fragaria vesca HOM05D005172 ORTHO05D006324 2.6e-14 83.2 146 31.5
SMO119G0084 Selaginella moellendorffii HOM05D005172 ORTHO05D006324 2.6e-14 83.2 97 38.1
BolC6t37994H Brassica oleracea HOM05D005172 ORTHO05D006324 3.4e-14 82.8 122 33.6
Duzib133G1494 Durio zibethinus HOM05D005172 ORTHO05D006324 3.4e-14 82.8 121 34.7
FAN20G2313 Fragaria x ananassa HOM05D005172 ORTHO05D006324 3.4e-14 82.8 146 31.5
Gohir.D07G133500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 3.4e-14 82.8 144 32.6
Manes.05G014300 Manihot esculenta HOM05D005172 ORTHO05D006324 3.4e-14 82.8 116 36.2
Potri.014G118600 Populus trichocarpa HOM05D005172 ORTHO05D006324 3.4e-14 82.8 106 35.8
Prupe.8G000200 Prunus persica HOM05D005172 ORTHO05D006324 3.4e-14 82.8 121 33.9
BcaC08g45198 Brassica carinata HOM05D005172 ORTHO05D006324 4.4e-14 82.4 122 33.6
C06p28240 Brassica napus HOM05D005172 ORTHO05D006324 4.4e-14 82.4 122 33.6
Thhalv10006054m.g Eutrema salsugineum HOM05D005172 ORTHO05D006324 4.4e-14 82.4 140 29.3
FAN24G2042 Fragaria x ananassa HOM05D005172 ORTHO05D006324 4.4e-14 82.4 146 31.5
Gorai.001G144800 Gossypium raimondii HOM05D005172 ORTHO05D006324 4.4e-14 82.4 144 32.6
Oeu018081.1 Olea europaea HOM05D005172 ORTHO05D006324 4.4e-14 82.4 106 34.9
Gohir.D12G127500 Gossypium hirsutum HOM05D005172 ORTHO05D006324 5.7e-14 82.0 109 35.8
Gorai.008G138400 Gossypium raimondii HOM05D005172 ORTHO05D006324 5.7e-14 82.0 109 35.8
TWI36G0897 Tripterygium wilfordii HOM05D005172 ORTHO05D006324 5.7e-14 82.0 144 34.0
AL5G45130 Arabidopsis lyrata HOM05D005172 ORTHO05D006324 7.5e-14 81.6 137 29.2
Dinv24461 Davidia involucrata HOM05D005172 ORTHO05D006324 7.5e-14 81.6 121 32.2
FAN20G2797 Fragaria x ananassa HOM05D005172 ORTHO05D006324 9.8e-14 81.3 157 29.9
MD07G1000100 Malus domestica HOM05D005172 ORTHO05D006324 9.8e-14 81.3 121 33.1
Sc17g0000390 Simmondsia chinensis HOM05D005172 ORTHO05D006324 9.8e-14 81.3 109 36.7
TAR633G1620 Trochodendron aralioides HOM05D005172 ORTHO05D006324 9.8e-14 81.3 121 29.8
BcaB02g07340 Brassica carinata HOM05D005172 ORTHO05D006324 1.3e-13 80.9 121 32.2
Ciclev10020948m.g Citrus clementina HOM05D005172 ORTHO05D006324 1.3e-13 80.9 106 35.8
MELO3C015915.2 Cucumis melo HOM05D005172 ORTHO05D006324 1.3e-13 80.9 121 33.1
FAN24G1196 Fragaria x ananassa HOM05D005172 ORTHO05D006324 1.3e-13 80.9 157 29.9
ATR0693G418 Amborella trichopoda HOM05D005172 ORTHO05D006324 1.7e-13 80.5 121 30.6
CsaV3_7G030060 Cucumis sativus L. HOM05D005172 ORTHO05D006324 1.7e-13 80.5 121 33.1
Nn4g25569 Nelumbo nucifera HOM05D005172 ORTHO05D006324 1.7e-13 80.5 144 27.8
Os03g0309000 Oryza sativa ssp. japonica HOM05D005172 ORTHO05D006324 1.7e-13 80.5 103 36.9
RcHm_v2.0_Chr6g0249301 Rosa chinensis HOM05D005172 ORTHO05D006324 1.7e-13 80.5 121 32.2
Carub.0005s2909 Capsella rubella HOM05D005172 ORTHO05D006324 2.2e-13 80.1 137 29.2
CARHR172700 Cardamine hirsuta HOM05D005172 ORTHO05D006324 2.2e-13 80.1 121 32.2
Sp5g01030 Schrenkiella parvula HOM05D005172 ORTHO05D006324 2.2e-13 80.1 126 32.5
THA.LOC104827661 Tarenaya hassleriana HOM05D005172 ORTHO05D006324 2.2e-13 80.1 136 29.4
Thecc.01G315700 Theobroma cacao HOM05D005172 ORTHO05D006324 2.2e-13 80.1 132 33.3
SGA_v2.0_scaffold334G49079 Striga asiatica HOM05D005172 ORTHO05D006324 2.8e-13 79.7 123 34.1
AagrBONN_evm.TU.Sc2ySwM_228.5181 Anthoceros agrestis HOM05D005172 ORTHO05D006324 3.7e-13 79.3 121 33.9
Nitab4.5_0011508g0010 Nicotiana tabacum HOM05D005172 ORTHO05D006324 3.7e-13 79.3 121 33.1
FAN19G1206 Fragaria x ananassa HOM05D005172 ORTHO05D006324 6.3e-13 78.6 118 33.1
MBI18_g32028_MAGBIO Magnolia biondii HOM05D005172 ORTHO05D006324 8.3e-13 78.2 124 29.0
Nitab4.5_0001338g0130 Nicotiana tabacum HOM05D005172 ORTHO05D006324 8.3e-13 78.2 106 34.9
TAR362G0256 Trochodendron aralioides HOM05D005172 ORTHO05D006324 8.3e-13 78.2 154 27.3
Cfa005774 Carpinus fangiana HOM05D005172 ORTHO05D006324 1.1e-12 77.8 116 32.8
Dinv30897 Davidia involucrata HOM05D005172 ORTHO05D006324 1.1e-12 77.8 121 29.8
Manes.05G014725 Manihot esculenta HOM05D005172 ORTHO05D006324 1.1e-12 77.8 92 39.1
Mapoly0070s0043 Marchantia polymorpha HOM05D005172 ORTHO05D006324 1.1e-12 77.8 140 30.0
SEGI_37594 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 1.1e-12 77.8 122 33.6
SEGI_40738 Sequoiadendron giganteum HOM05D005172 ORTHO05D006324 1.1e-12 77.8 122 33.6
Phvul.007G213050 Phaseolus vulgaris HOM05D005172 ORTHO05D006324 1.4e-12 77.4 126 31.7
Haze_05066 Corylus avellana HOM05D005172 ORTHO05D006324 1.8e-12 77.0 116 32.8
HPP92_002597 Vanilla planifolia HOM05D005172 ORTHO05D006324 1.8e-12 77.0 142 30.3
CANSAT25G1511 Cannabis sativa HOM05D005172 ORTHO05D006324 2.4e-12 76.6 122 32.8
Ah.02g112400 Amaranthus hybridus HOM05D005172 ORTHO05D006324 3.1e-12 76.3 114 36.0
ClCG09G005000 Citrullus lanatus HOM05D005172 ORTHO05D006324 3.1e-12 76.3 121 30.6
Lj5g0001265 Lotus japonicus HOM05D005172 ORTHO05D006324 3.1e-12 76.3 123 30.9
Oeu000005.1 Olea europaea HOM05D005172 ORTHO05D006324 3.1e-12 76.3 106 33.0
Sed0009537 Sechium edule HOM05D005172 ORTHO05D006324 3.1e-12 76.3 121 31.4
COL.COLO4_23212 Corchorus olitorius HOM05D005172 ORTHO05D006324 4.1e-12 75.9 121 31.4
Eucgr.H01000 Eucalyptus grandis HOM05D005172 ORTHO05D006324 4.1e-12 75.9 136 30.9
Ah.01g003950 Amaranthus hybridus HOM05D005172 ORTHO05D006324 5.4e-12 75.5 114 34.2
Manes.05G005607 Manihot esculenta HOM05D005172 ORTHO05D006324 5.4e-12 75.5 92 38.0
Manes.05G011070 Manihot esculenta HOM05D005172 ORTHO05D006324 5.4e-12 75.5 92 38.0
Manes.08G002402 Manihot esculenta HOM05D005172 ORTHO05D006324 5.4e-12 75.5 92 38.0
CiPaw.07G118900 Carya illinoinensis HOM05D005172 ORTHO05D006324 7.0e-12 75.1 121 28.9
DCAR_018281 Daucus carota HOM05D005172 ORTHO05D006324 7.0e-12 75.1 107 35.5
Lalb_Chr21g0309651 Lupinus albus HOM05D005172 ORTHO05D006324 7.0e-12 75.1 106 32.1
MSTRG.21697 Avicennia marina HOM05D005172 ORTHO05D006324 9.2e-12 74.7 122 32.0
Ciclev10024074m.g Citrus clementina HOM05D005172 ORTHO05D006324 9.2e-12 74.7 94 36.2
Hund09645 Selenicereus undatus HOM05D005172 ORTHO05D006324 9.2e-12 74.7 111 31.5
VMungo0720G2990 Vigna mungo HOM05D005172 ORTHO05D006324 9.2e-12 74.7 126 31.0
Psat6g162640 Pisum sativum HOM05D005172 ORTHO05D006324 1.6e-11 73.9 107 30.8
arahy.Tifrunner.gnm1.ann1.2XA8QH Arachis hypogaea HOM05D005172 ORTHO05D006324 2.0e-11 73.6 119 31.1
Duzib211G0527 Durio zibethinus HOM05D005172 ORTHO05D006324 2.0e-11 73.6 94 36.2
Lalb_Chr06g0166961 Lupinus albus HOM05D005172 ORTHO05D006324 3.5e-11 72.8 135 31.1
HPP92_012811 Vanilla planifolia HOM05D005172 ORTHO05D006324 3.5e-11 72.8 145 33.1
arahy.Tifrunner.gnm1.ann1.SY690W Arachis hypogaea HOM05D005172 ORTHO05D006324 4.5e-11 72.4 119 31.1
EL10As5g23554 Beta vulgaris HOM05D005172 ORTHO05D006324 4.5e-11 72.4 145 27.6
Glyma.10G011700 Glycine max HOM05D005172 ORTHO05D006324 4.5e-11 72.4 117 29.9
Gohir.A12G123800 Gossypium hirsutum HOM05D005172 ORTHO05D006324 5.9e-11 72.0 109 32.1
Glyma.02G011100 Glycine max HOM05D005172 ORTHO05D006324 7.8e-11 71.6 126 29.4
Pp3c9_8970 Physcomitrium patens HOM05D005172 ORTHO05D006324 7.8e-11 71.6 143 32.2
QL12p019456 Quercus lobata HOM05D005172 ORTHO05D006324 1.3e-10 70.9 106 30.2
Solyc01g079310.3 Solanum lycopersicum HOM05D005172 ORTHO05D006324 1.7e-10 70.5 143 25.9
Ca_10273_v3 Cicer arietinum L. HOM05D005172 ORTHO05D006324 2.9e-10 69.7 107 30.8
Medtr1g086810 Medicago truncatula HOM05D005172 ORTHO05D006324 2.9e-10 69.7 124 28.2
Pp3c15_10420 Physcomitrium patens HOM05D005172 ORTHO05D006324 2.9e-10 69.7 128 32.8
Sopen01g031090 Solanum pennellii HOM05D005172 ORTHO05D006324 2.9e-10 69.7 143 25.2
AUR62022232 Chenopodium quinoa HOM05D005172 ORTHO05D006324 3.8e-10 69.3 111 30.6
PGSC0003DMG400009049 Solanum tuberosum HOM05D005172 ORTHO05D006324 5.0e-10 68.9 143 25.2
CAN.G293.20 Capsicum annuum HOM05D005172 ORTHO05D006324 1.1e-09 67.8 139 26.6
AUR62031944 Chenopodium quinoa HOM05D005172 ORTHO05D006324 3.3e-09 66.2 114 30.7
vmacro01567 Vaccinium macrocarpon HOM05D005172 ORTHO05D006324 6.8e-07 58.5 102 30.4
Actinidia16862 Actinidia chinensis HOM05D005172 ORTHO05D006324 1.5e-06 57.4 62 38.7
Hma1.2p1_3280F.1_g334820 Hydrangea macrophylla HOM05D005172 ORTHO05D006324 2.6e-06 56.6 55 40.0


User provided reference genes

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