Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g51378 Chara braunii HOM05D007267 ORTHO05D009053 1.2e-144 516.5 262 100.0
AagrBONN_evm.TU.Sc2ySwM_117.833 Anthoceros agrestis HOM05D007267 ORTHO05D009053 1.9e-22 110.5 80 60.0
Pp3c3_19300 Physcomitrium patens HOM05D007267 ORTHO05D009053 2.4e-20 103.6 69 65.2
arahy.Tifrunner.gnm1.ann1.NLVX9W Arachis hypogaea HOM05D007267 ORTHO05D009053 1.2e-19 101.3 107 44.9
arahy.Tifrunner.gnm1.ann1.YII7CZ Arachis hypogaea HOM05D007267 ORTHO05D009053 1.2e-19 101.3 107 44.9
Mapoly0146s0012 Marchantia polymorpha HOM05D007267 ORTHO05D009053 5.8e-19 99.0 66 63.6
Manes.11G104200 Manihot esculenta HOM05D007267 ORTHO05D009053 2.2e-18 97.1 75 54.7
SMO367G0148 Selaginella moellendorffii HOM05D007267 ORTHO05D009053 3.8e-18 96.3 64 64.1
SEGI_22571 Sequoiadendron giganteum HOM05D007267 ORTHO05D009053 6.4e-18 95.5 69 59.4
Lalb_Chr17g0347461 Lupinus albus HOM05D007267 ORTHO05D009053 2.4e-17 93.6 71 52.1
Potri.009G155300 Populus trichocarpa HOM05D007267 ORTHO05D009053 2.4e-17 93.6 71 56.3
EL10Ac7g16252 Beta vulgaris HOM05D007267 ORTHO05D009053 4.2e-17 92.8 70 52.9
MD03G1161500 Malus domestica HOM05D007267 ORTHO05D009053 5.4e-17 92.4 78 50.0
Thecc.09G267200 Theobroma cacao HOM05D007267 ORTHO05D009053 7.1e-17 92.0 69 53.6
Cc05_g03630 Coffea canephora HOM05D007267 ORTHO05D009053 1.2e-16 91.3 79 51.9
Sabra09G0121800 Salix brachista HOM05D004779 ORTHO05D005737 1.2e-16 91.3 70 54.3
Atru.chr3.3040 Acer truncatum HOM05D007267 ORTHO05D009053 1.6e-16 90.9 76 50.0
FvH4_3g26950 Fragaria vesca HOM05D007267 ORTHO05D009053 1.6e-16 90.9 69 53.6
FAN21G3895 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.6e-16 90.9 75 50.7
GSVIVG01037512001 Vitis vinifera HOM05D007267 ORTHO05D009053 1.6e-16 90.9 67 56.7
ATR0697G260 Amborella trichopoda HOM05D007267 ORTHO05D009053 2.1e-16 90.5 70 51.4
CiPaw.13G125300 Carya illinoinensis HOM05D007267 ORTHO05D009053 2.1e-16 90.5 70 52.9
RcHm_v2.0_Chr5g0049391 Rosa chinensis HOM05D007267 ORTHO05D009053 2.1e-16 90.5 75 50.7
C02p10530 Brassica napus HOM05D007267 ORTHO05D009053 2.7e-16 90.1 70 50.0
BraA02t05605Z Brassica rapa HOM05D007267 ORTHO05D009053 2.7e-16 90.1 70 50.0
VMungo0540G2312 Vigna mungo HOM05D007267 ORTHO05D009053 2.7e-16 90.1 80 51.2
AL6G32500 Arabidopsis lyrata HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
AT5G20935 Arabidopsis thaliana HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
BcaB05g22800 Brassica carinata HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
BcaC03g13815 Brassica carinata HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
BcaNung05756 Brassica carinata HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
A03p10350 Brassica napus HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
C03p11890 Brassica napus HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
BolC2t07084H Brassica oleracea HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
BolC3t13659H Brassica oleracea HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
CANSAT54G0135 Cannabis sativa HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 54.3
Carub.0006s1925 Capsella rubella HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
Migut.N02428 Erythranthe guttata HOM05D007267 ORTHO05D009053 3.5e-16 89.7 69 53.6
Thhalv10015046m.g Eutrema salsugineum HOM05D007267 ORTHO05D009053 3.5e-16 89.7 70 48.6
FAN16G2508 Fragaria x ananassa HOM05D007267 ORTHO05D009053 3.5e-16 89.7 72 52.8
Actinidia22464 Actinidia chinensis HOM05D007267 ORTHO05D009053 4.6e-16 89.4 69 53.6
MSTRG.12404 Avicennia marina HOM05D007267 ORTHO05D009053 4.6e-16 89.4 70 54.3
CAN.G226.32 Capsicum annuum HOM05D007267 ORTHO05D009053 4.6e-16 89.4 70 51.4
COL.COLO4_25353 Corchorus olitorius HOM05D007267 ORTHO05D009053 4.6e-16 89.4 69 52.2
Duzib170G0076 Durio zibethinus HOM05D007267 ORTHO05D009053 4.6e-16 89.4 78 47.4
Eucgr.J00600 Eucalyptus grandis HOM05D007267 ORTHO05D009053 4.6e-16 89.4 86 45.3
HanXRQChr09g0268081 Helianthus annuus HOM05D007267 ORTHO05D009053 4.6e-16 89.4 101 40.6
Solyc01g009245.1 Solanum lycopersicum HOM05D007267 ORTHO05D009053 4.6e-16 89.4 73 50.7
Sopen01g004730 Solanum pennellii HOM05D007267 ORTHO05D009053 4.6e-16 89.4 73 50.7
PGSC0003DMG400013132 Solanum tuberosum HOM05D007267 ORTHO05D009053 4.6e-16 89.4 75 49.3
TWI31G1096 Tripterygium wilfordii HOM05D007267 ORTHO05D009053 4.6e-16 89.4 70 52.9
Aa31LG1G13830 Aethionema arabicum HOM05D007267 ORTHO05D009053 6.0e-16 89.0 70 50.0
BraA03t10347Z Brassica rapa HOM05D007267 ORTHO05D009053 6.0e-16 89.0 70 48.6
Glyma.07G213600 Glycine max HOM05D007267 ORTHO05D009053 6.0e-16 89.0 70 51.4
Hma1.2p1_0218F.1_g092330 Hydrangea macrophylla HOM05D007267 ORTHO05D009053 6.0e-16 89.0 73 50.7
CARHR191910 Cardamine hirsuta HOM05D007267 ORTHO05D009053 7.8e-16 88.6 70 47.1
Glyma.02G102300 Glycine max HOM05D007267 ORTHO05D009053 7.8e-16 88.6 79 48.1
Psat5g107600 Pisum sativum HOM05D007267 ORTHO05D009053 7.8e-16 88.6 70 51.4
Prupe.6G149700 Prunus persica HOM05D007267 ORTHO05D009053 7.8e-16 88.6 70 51.4
QL03p058144 Quercus lobata HOM05D007267 ORTHO05D009053 7.8e-16 88.6 78 48.7
unitig_8.g2981 Utricularia gibba HOM05D007267 ORTHO05D009053 7.8e-16 88.6 70 51.4
Ciclev10029598m.g Citrus clementina HOM05D007267 ORTHO05D009053 1.0e-15 88.2 70 51.4
Ca_16267_v3 Cicer arietinum L. HOM05D003229 ORTHO05D009053 1.3e-15 87.8 70 51.4
ClCG02G024060 Citrullus lanatus HOM05D007267 ORTHO05D009053 1.3e-15 87.8 70 51.4
Haze_02482 Corylus avellana HOM05D007267 ORTHO05D009053 1.3e-15 87.8 70 50.0
Dinv32141 Davidia involucrata HOM05D007267 ORTHO05D009053 1.3e-15 87.8 69 52.2
FAN25G2009 Fragaria x ananassa HOM05D007267 ORTHO05D009053 1.3e-15 87.8 75 49.3
Gohir.D11G012400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.3e-15 87.8 69 49.3
Gorai.007G016000 Gossypium raimondii HOM05D007267 ORTHO05D009053 1.3e-15 87.8 69 49.3
Ah.15g099120 Amaranthus hybridus HOM05D007267 ORTHO05D009053 1.7e-15 87.4 70 50.0
CSS0044664 Camellia sinensis var. sinensis HOM05D004779 ORTHO05D005737 1.7e-15 87.4 69 49.3
MELO3C014688.2 Cucumis melo HOM05D007267 ORTHO05D009053 1.7e-15 87.4 70 51.4
CsaV3_4G023270 Cucumis sativus L. HOM05D007267 ORTHO05D009053 1.7e-15 87.4 70 51.4
Lj6g0001809 Lotus japonicus HOM05D007267 ORTHO05D009053 1.7e-15 87.4 70 50.0
Medtr3g079820 Medicago truncatula HOM05D007267 ORTHO05D009053 1.7e-15 87.4 70 50.0
PGR119G2323 Punica granatum HOM05D007267 ORTHO05D009053 1.7e-15 87.4 70 51.4
TPR.G15594 Trifolium pratense HOM05D007267 ORTHO05D009053 1.7e-15 87.4 70 50.0
Cpa.g.sc103.55 Carica papaya HOM05D007267 ORTHO05D009053 2.3e-15 87.0 69 52.2
Lsat_1_v5_gn_4_124761 Lactuca sativa HOM05D007267 ORTHO05D009053 2.3e-15 87.0 69 52.2
Cfa019700 Carpinus fangiana HOM05D007267 ORTHO05D009053 3.0e-15 86.7 70 50.0
Cfa019701 Carpinus fangiana HOM05D007267 ORTHO05D009053 3.0e-15 86.7 70 50.0
Phvul.006G014400 Phaseolus vulgaris HOM05D007267 ORTHO05D009053 3.0e-15 86.7 80 47.5
Nn2g14465 Nelumbo nucifera HOM05D007267 ORTHO05D009053 3.9e-15 86.3 70 47.1
vmacro14300 Vaccinium macrocarpon HOM05D007267 ORTHO05D009053 3.9e-15 86.3 70 50.0
Peaxi162Scf00345g00617 Petunia axillaris HOM05D007267 ORTHO05D009053 5.1e-15 85.9 75 49.3
Aqoxy2G00618 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 6.6e-15 85.5 69 50.7
PSO339G2642 Papaver somniferum HOM05D007267 ORTHO05D009053 6.6e-15 85.5 75 46.7
PSO384G0574 Papaver somniferum HOM05D007267 ORTHO05D009053 6.6e-15 85.5 75 46.7
Nitab4.5_0001504g0080 Nicotiana tabacum HOM05D007267 ORTHO05D009053 1.1e-14 84.7 70 50.0
THA.LOC104799596 Tarenaya hassleriana HOM05D007267 ORTHO05D009053 1.1e-14 84.7 70 47.1
TAR623G0997 Trochodendron aralioides HOM05D007267 ORTHO05D009053 1.5e-14 84.3 75 50.7
Duzib168G2107 Durio zibethinus HOM05D004779 ORTHO05D005737 1.3e-13 81.3 69 47.8
arahy.Tifrunner.gnm1.ann1.SB69IV Arachis hypogaea HOM05D007267 ORTHO05D009053 2.1e-13 80.5 146 32.9
CDE07G1374 Ceratophyllum demersum HOM05D004582 ORTHO05D005507 3.6e-13 79.7 89 42.7
SalBow3G2700 Salvia bowleyana HOM05D007267 ORTHO05D009053 3.6e-13 79.7 75 45.3
FAN11G1992 Fragaria x ananassa HOM05D007267 ORTHO05D009053 6.2e-13 79.0 69 50.7
Sed0001981 Sechium edule HOM05D007267 ORTHO05D009053 6.2e-13 79.0 62 51.6
Duzib168G1484 Durio zibethinus HOM05D007267 ORTHO05D009053 1.4e-12 77.8 69 44.9
Gohir.A11G015400 Gossypium hirsutum HOM05D007267 ORTHO05D009053 1.4e-12 77.8 61 47.5
Zm00001eb015220 Zea mays HOM05D007267 ORTHO05D009053 5.3e-12 75.9 70 42.9
Rhsim01G0198000 Rhododendron simsii HOM05D007267 ORTHO05D009053 1.2e-11 74.7 108 36.1
Sed0001742 Sechium edule HOM05D007267 ORTHO05D009053 1.2e-11 74.7 73 47.9
ECA232G2859 Erigeron canadensis HOM05D000436 ORTHO05D008174 2.0e-11 73.9 65 47.7
Aqoxy51s004 Aquilegia oxysepala HOM05D007267 ORTHO05D009053 7.6e-11 72.0 54 55.6
Medtr3g079783 Medicago truncatula HOM05D000005 ORTHO05D000294 1.0e-07 61.6 85 36.5
arahy.Tifrunner.gnm1.ann1.69KWVE Arachis hypogaea HOM05D007267 ORTHO05D009053 9.6e-06 55.1 77 37.7


User provided reference genes

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