Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g51257 Chara braunii HOM05D006958 ORTHO05D008814 1.5e-211 739.6 473 100.0
Pp3c12_1620 Physcomitrium patens HOM05D006958 ORTHO05D008814 1.3e-40 171.8 331 36.3
Eucgr.F02250 Eucalyptus grandis HOM05D006958 ORTHO05D008814 1.2e-35 155.2 329 33.7
CSS0020437 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 6.1e-35 152.9 309 34.3
MSTRG.24376 Avicennia marina HOM05D006958 ORTHO05D008814 3.0e-34 150.6 353 32.3
Gorai.009G220300 Gossypium raimondii HOM05D006958 ORTHO05D008814 5.2e-34 149.8 333 34.8
Actinidia10201 Actinidia chinensis HOM05D006958 ORTHO05D008814 8.8e-34 149.1 317 33.1
Dinv39219 Davidia involucrata HOM05D006958 ORTHO05D008814 1.2e-33 148.7 308 34.4
Gohir.D05G213600 Gossypium hirsutum HOM05D006958 ORTHO05D008814 2.6e-33 147.5 333 34.2
arahy.Tifrunner.gnm1.ann1.JFD9T8 Arachis hypogaea HOM05D006958 ORTHO05D008814 9.7e-33 145.6 187 41.7
Actinidia22696 Actinidia chinensis HOM05D006958 ORTHO05D008814 1.3e-32 145.2 336 32.7
CSS0026693 Camellia sinensis var. sinensis HOM05D006958 ORTHO05D008814 1.3e-32 145.2 309 33.7
HanXRQChr08g0229631 Helianthus annuus HOM05D006958 ORTHO05D008814 1.7e-32 144.8 333 35.1
MBI16_g23890_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D008814 2.8e-32 144.1 324 32.4
Manes.18G046700 Manihot esculenta HOM05D006958 ORTHO05D008814 4.8e-32 143.3 182 40.7
CDE04G0359 Ceratophyllum demersum HOM05D006958 ORTHO05D008814 6.3e-32 142.9 190 41.1
Migut.N02783 Erythranthe guttata HOM05D006958 ORTHO05D008814 8.3e-32 142.5 329 30.7
COL.COLO4_28503 Corchorus olitorius HOM05D006958 ORTHO05D008814 1.8e-31 141.4 329 33.4
Lsat_1_v5_gn_6_110920 Lactuca sativa HOM05D006958 ORTHO05D008814 1.8e-31 141.4 346 32.9
Ciclev10001733m.g Citrus clementina HOM05D006958 ORTHO05D008814 3.1e-31 140.6 311 31.8
Duzib093G1923 Durio zibethinus HOM05D006958 ORTHO05D008814 3.1e-31 140.6 328 33.8
Lalb_Chr14g0368181 Lupinus albus HOM05D006958 ORTHO05D008814 3.1e-31 140.6 174 44.8
Thecc.08G088500 Theobroma cacao HOM05D006958 ORTHO05D008814 4.1e-31 140.2 327 31.8
Rhsim06G0062400 Rhododendron simsii HOM05D006958 ORTHO05D008814 5.3e-31 139.8 323 32.5
THA.LOC104816754 Tarenaya hassleriana HOM05D006958 ORTHO05D008814 9.1e-31 139.0 337 33.5
TWI12G1073 Tripterygium wilfordii HOM05D006958 ORTHO05D008814 9.1e-31 139.0 311 33.1
Potri.002G118300 Populus trichocarpa HOM05D006958 ORTHO05D008814 1.6e-30 138.3 320 31.6
Sc02g0007890 Simmondsia chinensis HOM05D006958 ORTHO05D008814 1.6e-30 138.3 330 33.0
Atru.chr13.835 Acer truncatum HOM05D006958 ORTHO05D008814 2.0e-30 137.9 198 39.4
AT1G59600 Arabidopsis thaliana HOM05D006958 ORTHO05D008814 2.0e-30 137.9 321 31.8
PGR031G1511 Punica granatum HOM05D006958 ORTHO05D008814 2.0e-30 137.9 335 32.8
Ca_13215_v3 Cicer arietinum L. HOM05D006958 ORTHO05D008814 2.7e-30 137.5 187 40.6
TAR376G0445 Trochodendron aralioides HOM05D006958 ORTHO05D008814 2.7e-30 137.5 345 31.9
ATR0739G011 Amborella trichopoda HOM05D006958 ORTHO05D008814 3.5e-30 137.1 335 31.6
CARHR283790 Cardamine hirsuta HOM05D006958 ORTHO05D008814 3.5e-30 137.1 332 31.3
Glyma.14G089018 Glycine max HOM05D006958 ORTHO05D008814 3.5e-30 137.1 188 40.4
TPR.G37796 Trifolium pratense HOM05D006958 ORTHO05D008814 4.5e-30 136.7 196 39.8
SGA_v2.0_scaffold28G11833 Striga asiatica HOM05D006958 ORTHO05D008814 7.7e-30 136.0 323 30.3
ClCG08G016520 Citrullus lanatus HOM05D006958 ORTHO05D008814 1.3e-29 135.2 328 32.3
Carub.0002s0585 Capsella rubella HOM05D006958 ORTHO05D008814 2.9e-29 134.0 330 32.1
FvH4_2g33060 Fragaria vesca HOM05D006958 ORTHO05D008814 2.9e-29 134.0 318 31.1
Nitab4.5_0002484g0050 Nicotiana tabacum HOM05D006958 ORTHO05D008814 2.9e-29 134.0 342 32.7
CAN.G724.27 Capsicum annuum HOM05D006958 ORTHO05D008814 3.8e-29 133.7 337 30.9
Gohir.A05G210300 Gossypium hirsutum HOM05D006958 ORTHO05D008814 3.8e-29 133.7 291 35.1
Lj5g0000926 Lotus japonicus HOM05D006958 ORTHO05D008814 6.5e-29 132.9 175 39.4
Medtr1g018000 Medicago truncatula HOM05D006958 ORTHO05D008814 6.5e-29 132.9 185 39.5
VMungo0647G0836 Vigna mungo HOM05D006958 ORTHO05D008814 6.5e-29 132.9 185 40.0
AL2G17470 Arabidopsis lyrata HOM05D006958 ORTHO05D008814 8.5e-29 132.5 319 31.7
FAN27G0228 Fragaria x ananassa HOM05D006958 ORTHO05D008814 8.5e-29 132.5 322 31.1
RcHm_v2.0_Chr6g0309651 Rosa chinensis HOM05D006958 ORTHO05D008814 1.1e-28 132.1 314 31.5
unitig_744.g24127 Utricularia gibba HOM05D006958 ORTHO05D008814 1.1e-28 132.1 319 30.4
Zm00001eb325900 Zea mays HOM05D006958 ORTHO05D008814 1.9e-28 131.3 200 40.0
ECA246G2880 Erigeron canadensis HOM05D006958 ORTHO05D008814 2.5e-28 131.0 304 32.9
GSVIVG01009341001 Vitis vinifera HOM05D006958 ORTHO05D008814 4.2e-28 130.2 189 39.2
Cc10_g05800 Coffea canephora HOM05D006958 ORTHO05D008814 5.5e-28 129.8 185 40.5
CsaV3_2G026090 Cucumis sativus L. HOM05D006958 ORTHO05D008814 7.2e-28 129.4 328 31.1
FAN24G2490 Fragaria x ananassa HOM05D006958 ORTHO05D008814 7.2e-28 129.4 322 31.1
Haze_22433 Corylus avellana HOM05D006958 ORTHO05D008814 1.2e-27 128.6 331 30.5
PSO675G0096 Papaver somniferum HOM05D006958 ORTHO05D008814 1.6e-27 128.3 330 31.5
arahy.Tifrunner.gnm1.ann1.8TQ0W2 Arachis hypogaea HOM05D006958 ORTHO05D008814 2.1e-27 127.9 326 29.8
CANSAT25G3409 Cannabis sativa HOM05D006958 ORTHO05D008814 2.1e-27 127.9 328 32.0
PSO541G2153 Papaver somniferum HOM05D006958 ORTHO05D008814 2.1e-27 127.9 345 31.0
Aqoxy6G02602 Aquilegia oxysepala HOM05D006958 ORTHO05D008814 2.7e-27 127.5 160 41.2
Prupe.1G422600 Prunus persica HOM05D006958 ORTHO05D008814 2.7e-27 127.5 310 31.0
Sed0002112 Sechium edule HOM05D006958 ORTHO05D008814 2.7e-27 127.5 308 32.8
Thhalv10023590m.g Eutrema salsugineum HOM05D006958 ORTHO05D008814 3.6e-27 127.1 321 31.2
FAN15G0662 Fragaria x ananassa HOM05D006958 ORTHO05D008814 3.6e-27 127.1 298 31.9
CiPaw.07G174600 Carya illinoinensis HOM05D006958 ORTHO05D008814 8.0e-27 125.9 346 31.8
Phvul.001G028000 Phaseolus vulgaris HOM05D006958 ORTHO05D008814 8.0e-27 125.9 174 40.8
QL12p038133 Quercus lobata HOM05D006958 ORTHO05D008814 8.0e-27 125.9 191 38.7
Sp2g04980 Schrenkiella parvula HOM05D006958 ORTHO05D008814 8.0e-27 125.9 311 31.8
FAN20G1263 Fragaria x ananassa HOM05D006958 ORTHO05D008814 1.0e-26 125.6 334 30.5
Cfa013775 Carpinus fangiana HOM05D006958 ORTHO05D008814 1.4e-26 125.2 331 30.5
Solyc04g077820.4 Solanum lycopersicum HOM05D006958 ORTHO05D008814 1.8e-26 124.8 342 31.0
BcaB04g20216 Brassica carinata HOM05D006958 ORTHO05D008814 3.0e-26 124.0 188 37.8
Lj4A758G77 Lonicera japonica HOM05D006958 ORTHO05D008814 3.0e-26 124.0 319 28.8
Sopen04g031420 Solanum pennellii HOM05D006958 ORTHO05D008814 6.8e-26 122.9 332 30.1
EL10Ac1g02379 Beta vulgaris HOM05D006958 ORTHO05D008814 8.8e-26 122.5 295 32.2
BraA01t03033Z Brassica rapa HOM05D006958 ORTHO05D008814 8.8e-26 122.5 331 29.9
Nitab4.5_0004654g0020 Nicotiana tabacum HOM05D006958 ORTHO05D008814 8.8e-26 122.5 332 30.4
Hund05299 Selenicereus undatus HOM05D006958 ORTHO05D008814 8.8e-26 122.5 191 36.6
PSO541G3524 Papaver somniferum HOM05D006958 ORTHO05D008814 1.2e-25 122.1 332 31.0
MD15G1069100 Malus domestica HOM05D006958 ORTHO05D008814 3.4e-25 120.6 337 31.2
SMO334G0101 Selaginella moellendorffii HOM05D006958 ORTHO05D008814 3.4e-25 120.6 168 40.5
Cpa.g.sc142.28 Carica papaya HOM05D006958 ORTHO05D008814 4.4e-25 120.2 291 33.3
C01p36350 Brassica napus HOM05D006958 ORTHO05D008814 5.7e-25 119.8 338 30.2
HPP92_009523 Vanilla planifolia HOM05D006958 ORTHO05D008814 5.7e-25 119.8 350 29.1
A01p28700 Brassica napus HOM05D006958 ORTHO05D008814 7.5e-25 119.4 339 30.4
MELO3C010802.2 Cucumis melo HOM05D006958 ORTHO05D008814 7.5e-25 119.4 338 29.9
HPP92_009559 Vanilla planifolia HOM05D006958 ORTHO05D008814 1.3e-24 118.6 140 40.0
PGSC0003DMG400010608 Solanum tuberosum HOM05D006958 ORTHO05D008814 2.8e-24 117.5 345 30.4
BolC1t03593H Brassica oleracea HOM05D006958 ORTHO05D008814 6.3e-24 116.3 337 30.0
Peaxi162Scf00081g02114 Petunia axillaris HOM05D006958 ORTHO05D008814 8.3e-24 115.9 315 30.8
Aa31LG2G10550 Aethionema arabicum HOM05D006958 ORTHO05D008814 7.0e-23 112.8 294 31.3
DCAR_020049 Daucus carota HOM05D006958 ORTHO05D008814 1.6e-22 111.7 318 28.9
Psat6g018160 Pisum sativum HOM05D006958 ORTHO05D008814 6.6e-13 79.7 109 41.3
Cfa010280 Carpinus fangiana HOM05D006958 ORTHO05D008814 8.0e-11 72.8 91 44.0
BolC4t24190H Brassica oleracea HOM05D006958 ORTHO05D008814 2.3e-10 71.2 133 35.3
C04p26140 Brassica napus HOM05D006958 ORTHO05D008814 2.6e-09 67.8 90 41.1
Os01g0593100 Oryza sativa ssp. japonica HOM05D006958 ORTHO05D008814 2.6e-09 67.8 95 40.0
BcaC02g10644 Brassica carinata HOM05D006958 ORTHO05D008814 2.4e-07 61.2 86 40.7
MBI15_g25904_MAGBIO Magnolia biondii HOM05D006958 ORTHO05D017181 1.2e-06 58.9 78 35.9


User provided reference genes

Program Settings