Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g51236 Chara braunii HOM05D006361 ORTHO05D007824 7.5e-292 1006.5 533 100.0
Mapoly0161s0009 Marchantia polymorpha HOM05D006361 ORTHO05D007824 1.6e-31 141.7 450 29.3
AagrBONN_evm.TU.Sc2ySwM_228.545 Anthoceros agrestis HOM05D006361 ORTHO05D007824 3.0e-30 137.5 449 28.1
SEGI_09761 Sequoiadendron giganteum HOM05D006361 ORTHO05D007824 2.5e-29 134.4 457 30.6
Eucgr.G02045 Eucalyptus grandis HOM05D006361 ORTHO05D007824 1.1e-27 129.0 486 28.0
Os02g0672400 Oryza sativa ssp. japonica HOM05D006361 ORTHO05D007824 1.1e-24 119.0 459 26.8
HanXRQChr08g0224371 Helianthus annuus HOM05D006361 ORTHO05D007824 5.5e-24 116.7 449 26.5
TAR371G0655 Trochodendron aralioides HOM05D006361 ORTHO05D007824 9.3e-24 115.9 466 25.8
Ciclev10005401m.g Citrus clementina HOM05D006361 ORTHO05D007824 1.2e-23 115.5 474 25.9
PGSC0003DMG400030230 Solanum tuberosum HOM05D006361 ORTHO05D007824 1.2e-23 115.5 494 24.1
PGR142G2205 Punica granatum HOM05D006361 ORTHO05D007824 1.6e-23 115.2 450 26.2
Sed0017139 Sechium edule HOM05D006361 ORTHO05D007824 1.6e-23 115.2 472 26.3
CiPaw.05G161000 Carya illinoinensis HOM05D006361 ORTHO05D007824 6.0e-23 113.2 453 25.2
Cfa015091 Carpinus fangiana HOM05D006361 ORTHO05D007824 1.8e-22 111.7 480 24.8
Prupe.1G340600 Prunus persica HOM05D006361 ORTHO05D007824 1.8e-22 111.7 469 26.9
GSVIVG01000604001 Vitis vinifera HOM05D006361 ORTHO05D007824 1.8e-22 111.7 468 25.6
Peaxi162Scf00705g00017 Petunia axillaris HOM05D006361 ORTHO05D007824 5.1e-22 110.2 467 24.6
AL1G19780 Arabidopsis lyrata HOM05D006361 ORTHO05D007824 6.7e-22 109.8 482 25.3
Nitab4.5_0000944g0110 Nicotiana tabacum HOM05D006361 ORTHO05D007824 6.7e-22 109.8 480 26.2
Cc11_g04970 Coffea canephora HOM05D006361 ORTHO05D007824 1.1e-21 109.0 453 24.3
Sopen01g014340 Solanum pennellii HOM05D006361 ORTHO05D007824 1.9e-21 108.2 466 24.5
Cpa.g.sc2.83 Carica papaya HOM05D006361 ORTHO05D007824 1.3e-20 105.5 484 24.8
Sopen01g010510 Solanum pennellii HOM05D006361 ORTHO05D007824 1.3e-20 105.5 467 24.2
Thecc.02G299900 Theobroma cacao HOM05D006361 ORTHO05D007824 1.3e-20 105.5 472 23.7
arahy.Tifrunner.gnm1.ann1.DP1KMD Arachis hypogaea HOM05D006361 ORTHO05D007824 1.6e-20 105.1 474 25.7
VMungo0720G0403 Vigna mungo HOM05D006361 ORTHO05D007824 2.1e-20 104.8 467 25.9
ClCG11G000690 Citrullus lanatus HOM05D006361 ORTHO05D007824 2.8e-20 104.4 451 24.6
CAN.G282.86 Capsicum annuum HOM05D006361 ORTHO05D007824 3.7e-20 104.0 458 24.0
Gohir.A03G114200 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.7e-20 104.0 470 25.3
BcaB03g13282 Brassica carinata HOM05D006361 ORTHO05D007824 6.3e-20 103.2 486 25.9
Gorai.005G155100 Gossypium raimondii HOM05D006361 ORTHO05D007824 8.2e-20 102.8 471 25.3
Oeu005683.1 Olea europaea HOM05D006361 ORTHO05D007824 8.2e-20 102.8 453 24.1
Potri.010G099500 Populus trichocarpa HOM05D006361 ORTHO05D007824 8.2e-20 102.8 477 24.1
Duzib251G0777 Durio zibethinus HOM05D006361 ORTHO05D007824 1.1e-19 102.4 475 24.8
arahy.Tifrunner.gnm1.ann1.L5ZJMR Arachis hypogaea HOM05D006361 ORTHO05D007824 1.4e-19 102.1 474 25.7
CSS0021447 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 1.8e-19 101.7 459 25.7
MELO3C022554.2 Cucumis melo HOM05D006361 ORTHO05D007824 1.8e-19 101.7 451 24.6
ECA233G5480 Erigeron canadensis HOM05D006361 ORTHO05D007824 2.4e-19 101.3 449 24.5
HPP92_007296 Vanilla planifolia HOM05D006361 ORTHO05D007824 2.4e-19 101.3 481 25.4
Gohir.D02G138700 Gossypium hirsutum HOM05D006361 ORTHO05D007824 3.1e-19 100.9 471 25.1
CSS0002219 Camellia sinensis var. sinensis HOM05D006361 ORTHO05D007824 5.3e-19 100.1 469 24.9
Lj5g0003295 Lotus japonicus HOM05D006361 ORTHO05D007824 5.3e-19 100.1 451 25.5
Nitab4.5_0003889g0010 Nicotiana tabacum HOM05D006361 ORTHO05D007824 5.3e-19 100.1 473 24.5
CDE04G0863 Ceratophyllum demersum HOM05D006361 ORTHO05D007824 6.9e-19 99.8 466 25.5
Rhsim04G0169300 Rhododendron simsii HOM05D006361 ORTHO05D007824 9.0e-19 99.4 451 22.6
THA.LOC104815221 Tarenaya hassleriana HOM05D006361 ORTHO05D007824 9.0e-19 99.4 476 24.6
AUR62003478 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.2e-18 99.0 447 23.5
Glyma.20G108700 Glycine max HOM05D006361 ORTHO05D007824 1.2e-18 99.0 451 25.1
Nn4g24771 Nelumbo nucifera HOM05D006361 ORTHO05D007824 1.2e-18 99.0 463 25.5
AT1G09290 Arabidopsis thaliana HOM05D006361 ORTHO05D007824 1.5e-18 98.6 474 24.1
CARHR009260 Cardamine hirsuta HOM05D006361 ORTHO05D007824 1.5e-18 98.6 451 24.2
Carub.0001s0863 Capsella rubella HOM05D006361 ORTHO05D007824 2.6e-18 97.8 484 25.8
Lj6A727G89 Lonicera japonica HOM05D006361 ORTHO05D007824 3.4e-18 97.4 471 24.8
FAN22G0651 Fragaria x ananassa HOM05D006361 ORTHO05D007824 4.5e-18 97.1 465 25.4
PSO063G1793 Papaver somniferum HOM05D006361 ORTHO05D007824 5.9e-18 96.7 455 25.7
ATR0807G049 Amborella trichopoda HOM05D006361 ORTHO05D007824 7.6e-18 96.3 459 24.8
PSO782G3204 Papaver somniferum HOM05D006361 ORTHO05D007824 1.0e-17 95.9 199 36.7
TWI74G1113 Tripterygium wilfordii HOM05D006361 ORTHO05D007824 1.0e-17 95.9 450 24.2
FvH4_4g35990 Fragaria vesca HOM05D006361 ORTHO05D007824 1.3e-17 95.5 463 23.8
Sabra10G0072200 Salix brachista HOM05D006361 ORTHO05D007824 1.3e-17 95.5 493 22.9
Thhalv10008047m.g Eutrema salsugineum HOM05D006361 ORTHO05D007824 2.2e-17 94.7 480 23.3
EL10Ac6g15395 Beta vulgaris HOM05D006361 ORTHO05D007824 3.8e-17 94.0 450 22.9
FAN12G2025 Fragaria x ananassa HOM05D006361 ORTHO05D007824 3.8e-17 94.0 463 23.8
Manes.15G141000 Manihot esculenta HOM05D006361 ORTHO05D007824 3.8e-17 94.0 496 23.0
RcHm_v2.0_Chr4g0445621 Rosa chinensis HOM05D006361 ORTHO05D007824 3.8e-17 94.0 455 24.8
A08p34700 Brassica napus HOM05D006361 ORTHO05D007824 5.0e-17 93.6 478 24.5
QL03p040836 Quercus lobata HOM05D006361 ORTHO05D007824 5.0e-17 93.6 463 24.4
BcaC07g38489 Brassica carinata HOM05D006361 ORTHO05D007824 8.4e-17 92.8 498 23.9
C08p12590 Brassica napus HOM05D006361 ORTHO05D007824 8.4e-17 92.8 498 23.9
Dinv06050 Davidia involucrata HOM05D006361 ORTHO05D007824 1.9e-16 91.7 476 23.7
Hma1.2p1_0068F.1_g037170 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 1.9e-16 91.7 478 23.8
TPR.G2489 Trifolium pratense HOM05D006361 ORTHO05D007824 1.9e-16 91.7 208 34.1
BraA08t35382Z Brassica rapa HOM05D006361 ORTHO05D007824 2.5e-16 91.3 488 24.6
Aqoxy3G04165 Aquilegia oxysepala HOM05D006361 ORTHO05D007824 3.2e-16 90.9 449 23.4
arahy.Tifrunner.gnm1.ann1.D0LIF0 Arachis hypogaea HOM05D006361 ORTHO05D007824 4.2e-16 90.5 474 25.3
Lalb_Chr02g0143351 Lupinus albus HOM05D006361 ORTHO05D007824 4.2e-16 90.5 451 23.3
Psat6g231640 Pisum sativum HOM05D006361 ORTHO05D007824 4.2e-16 90.5 454 23.3
FAN17G1000 Fragaria x ananassa HOM05D006361 ORTHO05D007824 5.5e-16 90.1 452 23.7
BolC8t48897H Brassica oleracea HOM05D006361 ORTHO05D007824 7.2e-16 89.7 498 24.7
COL.COLO4_27543 Corchorus olitorius HOM05D006361 ORTHO05D007824 1.6e-15 88.6 196 32.7
FAN07G0576 Fragaria x ananassa HOM05D006361 ORTHO05D007824 1.6e-15 88.6 462 22.7
Lsat_1_v5_gn_8_33920 Lactuca sativa HOM05D006361 ORTHO05D007824 1.6e-15 88.6 448 23.4
MD16G1010000 Malus domestica HOM05D006361 ORTHO05D007824 3.5e-15 87.4 478 24.1
Aa31LG1G5840 Aethionema arabicum HOM05D006361 ORTHO05D007824 6.1e-15 86.7 447 24.4
Ca_11202_v3 Cicer arietinum L. HOM05D006361 ORTHO05D007824 6.1e-15 86.7 200 33.0
DCAR_030322 Daucus carota HOM05D006361 ORTHO05D007824 1.0e-14 85.9 473 24.1
Hma1.2p1_0068F.1_g037190 Hydrangea macrophylla HOM05D006361 ORTHO05D007824 3.0e-14 84.3 196 32.1
Medtr1g112360 Medicago truncatula HOM05D006361 ORTHO05D007824 3.0e-14 84.3 210 31.4
Sp1g07900 Schrenkiella parvula HOM05D006361 ORTHO05D007824 5.1e-14 83.6 472 23.7
AUR62017787 Chenopodium quinoa HOM05D006361 ORTHO05D007824 1.5e-13 82.0 447 23.5
CsaV3_5G012340 Cucumis sativus L. HOM05D006361 ORTHO05D007824 3.3e-13 80.9 249 28.9
Phvul.007G020000 Phaseolus vulgaris HOM05D006361 ORTHO05D007824 7.4e-13 79.7 407 25.1
SMO115G0015 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 9.7e-13 79.3 216 30.6
Haze_10736 Corylus avellana HOM05D006361 ORTHO05D007824 1.3e-12 79.0 178 34.3
SMO166G0069 Selaginella moellendorffii HOM05D006361 ORTHO05D007824 2.8e-12 77.8 212 30.7
arahy.Tifrunner.gnm1.ann1.3EIQ25 Arachis hypogaea HOM05D006361 ORTHO05D007824 1.1e-11 75.9 491 25.1
VMungo0251G1708 Vigna mungo HOM05D006361 ORTHO05D007824 4.1e-11 73.9 73 47.9
Ah.03g147180 Amaranthus hybridus HOM05D006361 ORTHO05D007824 1.2e-10 72.4 482 21.0
vmacro08586 Vaccinium macrocarpon HOM05D006361 ORTHO05D007824 2.0e-10 71.6 92 37.0
Zm00001eb250300 Zea mays HOM05D006361 ORTHO05D007824 2.6e-10 71.2 142 33.1
Cc00_g30730 Coffea canephora HOM05D006361 ORTHO05D007824 1.0e-09 69.3 87 39.1
Sc11g0003580 Simmondsia chinensis HOM05D006361 ORTHO05D007824 1.0e-09 69.3 64 46.9
Haze_10738 Corylus avellana HOM05D006361 ORTHO05D007824 1.3e-09 68.9 86 38.4
Atru.chr11.1031 Acer truncatum HOM05D006361 ORTHO05D007824 2.9e-09 67.8 480 22.9
Sabra19G0029800 Salix brachista HOM05D006361 ORTHO05D007824 3.8e-09 67.4 78 43.6
Actinidia34045 Actinidia chinensis HOM05D006361 ORTHO05D007824 6.5e-09 66.6 79 40.5
Pp3c10_230 Physcomitrium patens HOM05D006361 ORTHO05D007824 4.2e-08 63.9 56 50.0
QL03p040440 Quercus lobata HOM05D006361 ORTHO05D007824 7.2e-08 63.2 483 24.8


User provided reference genes

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