Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50947 Chara braunii HOM05D004263 ORTHO05D004931 6.8e-193 677.2 345 100.0
Mapoly0011s0120 Marchantia polymorpha HOM05D004263 ORTHO05D004931 5.5e-86 322.0 285 59.3
Pp3c14_1240 Physcomitrium patens HOM05D004263 ORTHO05D004931 1.0e-84 317.8 304 56.6
TAR627G0082 Trochodendron aralioides HOM05D004263 ORTHO05D004931 2.7e-80 303.1 302 54.3
DCAR_009724 Daucus carota HOM05D004263 ORTHO05D004931 5.9e-80 302.0 306 53.3
FvH4_6g44560 Fragaria vesca HOM05D004263 ORTHO05D004931 7.8e-80 301.6 302 54.6
FAN14G1228 Fragaria x ananassa HOM05D004263 ORTHO05D004931 1.0e-79 301.2 302 54.6
Solyc06g005080.4 Solanum lycopersicum HOM05D004263 ORTHO05D004931 1.7e-79 300.4 271 59.4
FAN02G3638 Fragaria x ananassa HOM05D004263 ORTHO05D004931 2.3e-79 300.1 302 54.6
Sopen06g001070 Solanum pennellii HOM05D004263 ORTHO05D004931 2.3e-79 300.1 287 57.5
RcHm_v2.0_Chr2g0161771 Rosa chinensis HOM05D004263 ORTHO05D004931 2.9e-79 299.7 302 54.3
vmacro09293 Vaccinium macrocarpon HOM05D004263 ORTHO05D004931 2.9e-79 299.7 302 54.0
Lsat_1_v5_gn_3_39980 Lactuca sativa HOM05D004263 ORTHO05D004931 6.6e-79 298.5 303 53.8
MSTRG.11470 Avicennia marina HOM05D004263 ORTHO05D004931 8.6e-79 298.1 303 53.1
MD14G1065300 Malus domestica HOM05D004263 ORTHO05D004931 8.6e-79 298.1 302 54.6
MD17G1084700 Malus domestica HOM05D004263 ORTHO05D004931 8.6e-79 298.1 302 54.6
Manes.12G082900 Manihot esculenta HOM05D004263 ORTHO05D004931 8.6e-79 298.1 305 53.1
PSO801G0468 Papaver somniferum HOM05D004263 ORTHO05D004931 8.6e-79 298.1 284 57.0
Lj1C736G5 Lonicera japonica HOM05D004263 ORTHO05D004931 1.5e-78 297.4 302 53.3
Nn2g15850 Nelumbo nucifera HOM05D004263 ORTHO05D004931 1.5e-78 297.4 285 56.1
PSO339G5244 Papaver somniferum HOM05D004263 ORTHO05D004931 1.5e-78 297.4 306 53.9
HPP92_004167 Vanilla planifolia HOM05D004263 ORTHO05D004931 1.5e-78 297.4 301 54.5
GSVIVG01030005001 Vitis vinifera HOM05D004263 ORTHO05D004931 1.5e-78 297.4 307 53.1
Actinidia39296 Actinidia chinensis HOM05D004263 ORTHO05D004931 2.5e-78 296.6 302 54.3
Dinv23716 Davidia involucrata HOM05D004263 ORTHO05D004931 2.5e-78 296.6 303 53.8
Hma1.2p1_0565F.1_g179560 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 2.5e-78 296.6 303 53.5
Hma1.2p1_0565F.1_g179570 Hydrangea macrophylla HOM05D004263 ORTHO05D004931 2.5e-78 296.6 303 53.5
Actinidia30490 Actinidia chinensis HOM05D004263 ORTHO05D004931 3.3e-78 296.2 302 53.3
Gohir.A01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 3.3e-78 296.2 302 53.6
COL.COLO4_13682 Corchorus olitorius HOM05D004263 ORTHO05D004931 4.3e-78 295.8 271 58.3
Gohir.D01G015400 Gossypium hirsutum HOM05D004263 ORTHO05D004931 4.3e-78 295.8 284 55.6
Nitab4.5_0001514g0020 Nicotiana tabacum HOM05D004263 ORTHO05D004931 4.3e-78 295.8 288 56.6
Gorai.002G017100 Gossypium raimondii HOM05D004263 ORTHO05D004931 5.6e-78 295.4 284 55.6
MBI02_g13236_MAGBIO Magnolia biondii HOM05D004263 ORTHO05D004931 5.6e-78 295.4 269 57.6
Migut.O00120 Erythranthe guttata HOM05D004263 ORTHO05D004931 7.3e-78 295.0 303 53.1
ECA246G4434 Erigeron canadensis HOM05D004263 ORTHO05D004931 9.5e-78 294.7 302 55.0
Aqoxy1G01192 Aquilegia oxysepala HOM05D004263 ORTHO05D004931 1.2e-77 294.3 283 55.8
Oeu001693.1 Olea europaea HOM05D004263 ORTHO05D004931 1.2e-77 294.3 271 59.0
Oeu001695.1 Olea europaea HOM05D004263 ORTHO05D004931 1.2e-77 294.3 271 59.0
Peaxi162Scf00255g01022 Petunia axillaris HOM05D004263 ORTHO05D004931 1.2e-77 294.3 292 55.8
Prupe.3G231000 Prunus persica HOM05D004263 ORTHO05D004931 1.2e-77 294.3 302 53.0
Rhsim04G0063000 Rhododendron simsii HOM05D004263 ORTHO05D004931 1.2e-77 294.3 304 52.3
Sed0028127 Sechium edule HOM05D004263 ORTHO05D004931 1.2e-77 294.3 307 53.1
TWI75G0058 Tripterygium wilfordii HOM05D004263 ORTHO05D004931 1.2e-77 294.3 284 55.6
HanXRQChr07g0200651 Helianthus annuus HOM05D004263 ORTHO05D004931 1.6e-77 293.9 303 54.1
FAN09G1275 Fragaria x ananassa HOM05D004263 ORTHO05D004931 2.1e-77 293.5 302 54.0
SGA_v2.0_scaffold90G27889 Striga asiatica HOM05D004263 ORTHO05D004931 2.8e-77 293.1 271 57.2
Cpa.g.sc34.88 Carica papaya HOM05D004263 ORTHO05D004931 3.6e-77 292.7 284 55.6
Thecc.02G171500 Theobroma cacao HOM05D004263 ORTHO05D004931 3.6e-77 292.7 284 55.3
CSS0035503 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 4.7e-77 292.4 304 53.9
CANSAT64G2398 Cannabis sativa HOM05D004263 ORTHO05D004931 4.7e-77 292.4 302 54.0
Eucgr.K00914 Eucalyptus grandis HOM05D004263 ORTHO05D004931 4.7e-77 292.4 305 52.1
Sabra13G0119200 Salix brachista HOM05D004263 ORTHO05D004931 4.7e-77 292.4 302 52.6
Ciclev10014147m.g Citrus clementina HOM05D004263 ORTHO05D004931 6.1e-77 292.0 284 54.9
THA.LOC104809434 Tarenaya hassleriana HOM05D004263 ORTHO05D004931 6.1e-77 292.0 282 55.7
QL08p037295 Quercus lobata HOM05D004263 ORTHO05D004931 8.0e-77 291.6 302 53.0
CsaV3_7G004120 Cucumis sativus L. HOM05D004263 ORTHO05D004931 1.0e-76 291.2 271 57.2
CiPaw.03G169700 Carya illinoinensis HOM05D004263 ORTHO05D004931 1.4e-76 290.8 306 52.6
AUR62034472 Chenopodium quinoa HOM05D004263 ORTHO05D004931 1.4e-76 290.8 281 54.8
EL10As1g23122 Beta vulgaris HOM05D004263 ORTHO05D004931 1.8e-76 290.4 300 53.0
SalBow7G3995 Salvia bowleyana HOM05D004263 ORTHO05D004931 1.8e-76 290.4 306 52.6
Cc04_g12270 Coffea canephora HOM05D004263 ORTHO05D004931 2.3e-76 290.0 284 56.3
Thhalv10006686m.g Eutrema salsugineum HOM05D004263 ORTHO05D004931 2.3e-76 290.0 303 52.5
Nitab4.5_0000025g0510 Nicotiana tabacum HOM05D004263 ORTHO05D004931 2.3e-76 290.0 259 59.8
Aa31LG1G2150 Aethionema arabicum HOM05D004263 ORTHO05D004931 3.0e-76 289.7 291 53.3
CDE05G0585 Ceratophyllum demersum HOM05D004263 ORTHO05D004931 3.0e-76 289.7 266 56.4
Carub.0001s1218 Capsella rubella HOM05D004263 ORTHO05D004931 4.0e-76 289.3 303 52.1
ClCG02G001300 Citrullus lanatus HOM05D004263 ORTHO05D004931 4.0e-76 289.3 271 56.8
AL1G23830 Arabidopsis lyrata HOM05D004263 ORTHO05D004931 5.2e-76 288.9 292 53.8
CARHR012770 Cardamine hirsuta HOM05D004263 ORTHO05D004931 5.2e-76 288.9 292 53.4
Lalb_Chr22g0356351 Lupinus albus HOM05D004263 ORTHO05D004931 5.2e-76 288.9 307 52.8
Potri.013G147600 Populus trichocarpa HOM05D004263 ORTHO05D004931 5.2e-76 288.9 305 51.1
PGR142G2990 Punica granatum HOM05D004263 ORTHO05D004931 5.2e-76 288.9 307 52.1
Ah.11g047230 Amaranthus hybridus HOM05D004263 ORTHO05D004931 6.8e-76 288.5 300 52.3
arahy.Tifrunner.gnm1.ann1.0PC56D Arachis hypogaea HOM05D004263 ORTHO05D004931 6.8e-76 288.5 291 54.0
arahy.Tifrunner.gnm1.ann1.RA2UAB Arachis hypogaea HOM05D004263 ORTHO05D004931 6.8e-76 288.5 291 54.0
AUR62041769 Chenopodium quinoa HOM05D004263 ORTHO05D004931 6.8e-76 288.5 301 52.5
A06p09160 Brassica napus HOM05D004263 ORTHO05D004931 8.9e-76 288.1 292 53.8
BraA06t24102Z Brassica rapa HOM05D004263 ORTHO05D004931 8.9e-76 288.1 292 53.8
AT1G12470 Arabidopsis thaliana HOM05D004263 ORTHO05D004931 1.2e-75 287.7 292 53.4
Glyma.13G301100 Glycine max HOM05D004263 ORTHO05D004931 1.2e-75 287.7 295 52.5
Sp1g11070 Schrenkiella parvula HOM05D004263 ORTHO05D004931 1.5e-75 287.3 292 53.4
A08p32810 Brassica napus HOM05D004263 ORTHO05D004931 2.6e-75 286.6 292 53.8
BraA08t35204Z Brassica rapa HOM05D004263 ORTHO05D004931 2.6e-75 286.6 292 53.8
CSS0002238 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 2.6e-75 286.6 302 52.0
CSS0005038 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 2.6e-75 286.6 303 51.8
C08p15450 Brassica napus HOM05D004263 ORTHO05D004931 4.4e-75 285.8 292 53.8
BolC5t29815H Brassica oleracea HOM05D004263 ORTHO05D004931 4.4e-75 285.8 293 52.9
Glyma.12G201100 Glycine max HOM05D004263 ORTHO05D004931 7.5e-75 285.0 288 52.4
Zm00001eb412950 Zea mays HOM05D004263 ORTHO05D004931 7.5e-75 285.0 302 50.3
BcaB03g13185 Brassica carinata HOM05D004263 ORTHO05D004931 9.8e-75 284.6 271 55.7
CSS0035062 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 9.8e-75 284.6 302 52.3
C05p10740 Brassica napus HOM05D004263 ORTHO05D004931 1.3e-74 284.3 292 52.4
Phvul.005G107700 Phaseolus vulgaris HOM05D004263 ORTHO05D004931 1.7e-74 283.9 268 56.0
Lj3g0003932 Lotus japonicus HOM05D004263 ORTHO05D004931 6.4e-74 282.0 288 55.2
Psat2g144400 Pisum sativum HOM05D004263 ORTHO05D004931 1.8e-73 280.4 304 51.6
Medtr8g063380 Medicago truncatula HOM05D004263 ORTHO05D004931 2.4e-73 280.0 304 52.0
Os08g0178100 Oryza sativa ssp. japonica HOM05D004263 ORTHO05D004931 9.2e-73 278.1 281 52.0
Ca_01536_v3 Cicer arietinum L. HOM05D004263 ORTHO05D004931 1.2e-72 277.7 276 53.3
Medtr5g026090 Medicago truncatula HOM05D004263 ORTHO05D004931 4.6e-72 275.8 304 51.6
Sc08g0004410 Simmondsia chinensis HOM05D004263 ORTHO05D004931 3.0e-71 273.1 257 56.4
BolC8t49173H Brassica oleracea HOM05D004263 ORTHO05D004931 9.5e-70 268.1 305 49.5
CSS0039065 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 9.5e-70 268.1 283 52.7
Atru.chr6.3077 Acer truncatum HOM05D004263 ORTHO05D004931 4.7e-69 265.8 294 52.0
Haze_03591 Corylus avellana HOM05D004263 ORTHO05D004931 8.0e-69 265.0 284 50.7
Cfa010655 Carpinus fangiana HOM05D004263 ORTHO05D004931 3.1e-68 263.1 284 50.4
Haze_13086 Corylus avellana HOM05D004263 ORTHO05D004931 5.2e-68 262.3 271 52.0
unitig_0.g1433 Utricularia gibba HOM05D004263 ORTHO05D004931 1.2e-67 261.2 188 69.1
BcaC05g25186 Brassica carinata HOM05D004263 ORTHO05D004931 1.7e-66 257.3 188 66.0
Duzib248G0991 Durio zibethinus HOM05D004263 ORTHO05D004931 2.2e-66 256.9 180 71.1
Lj8C117G6 Lonicera japonica HOM05D004263 ORTHO05D004931 2.4e-65 253.4 180 70.6
SMO239G0082 Selaginella moellendorffii HOM05D004263 ORTHO05D004931 4.1e-65 252.7 271 51.3
ATR0737G173 Amborella trichopoda HOM05D004263 ORTHO05D004931 1.0e-55 221.5 276 47.8
AagrBONN_evm.TU.Sc2ySwM_228.3812 Anthoceros agrestis HOM05D004263 ORTHO05D004931 4.0e-44 183.0 132 68.2
CAN.G224.16 Capsicum annuum HOM05D004263 ORTHO05D004931 5.8e-43 179.1 129 70.5
MELO3C018764.2 Cucumis melo HOM05D004263 ORTHO05D004931 7.6e-43 178.7 129 71.3
PRCOL_00001544 Prasinoderma coloniale HOM05D004263 ORTHO05D004931 1.0e-39 168.3 275 39.3
Cre07.g328550 Chlamydomonas reinhardtii HOM05D004263 ORTHO05D004931 5.3e-36 156.0 347 32.3
Cfa014543 Carpinus fangiana HOM05D004263 ORTHO05D004931 9.9e-35 151.8 129 60.5
Cfa022578 Carpinus fangiana HOM05D004263 ORTHO05D004931 9.6e-30 135.2 296 31.8
SEGI_15765 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 8.4e-26 122.1 133 47.4
SEGI_30776 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 1.4e-25 121.3 132 48.5
TPR.G28496 Trifolium pratense HOM05D004086 ORTHO05D004641 1.5e-22 111.3 175 37.1
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 3.7e-21 106.7 122 51.6
SEGI_16142 Sequoiadendron giganteum HOM05D004263 ORTHO05D004931 4.8e-21 106.3 76 73.7
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 6.2e-21 105.9 118 51.7
CSS0037177 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 2.0e-19 100.9 124 43.5
CSS0009942 Camellia sinensis var. sinensis HOM05D004263 ORTHO05D004931 5.1e-15 86.3 84 59.5
CAN.G224.15 Capsicum annuum HOM05D004263 ORTHO05D004931 2.4e-12 77.4 110 41.8
MCO10G067 Micromonas commoda HOM05D004263 ORTHO05D004931 6.1e-08 62.8 222 23.9


User provided reference genes

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