Interactive Phylogenetics Module

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If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50913 Chara braunii HOM05D004086 ORTHO05D004641 0.0e+00 1322.8 703 100.0
CBR_g50911 Chara braunii HOM05D004086 ORTHO05D004641 0.0e+00 1311.2 697 100.0
CBR_g22032 Chara braunii HOM05D004086 ORTHO05D004641 0.0e+00 1153.3 689 88.7
Mapoly0113s0019 Marchantia polymorpha HOM05D004086 ORTHO05D004641 3.2e-165 586.3 696 49.1
AagrBONN_evm.TU.Sc2ySwM_344.3508 Anthoceros agrestis HOM05D004086 ORTHO05D004641 1.7e-158 563.9 671 47.7
Pp3c2_15450 Physcomitrium patens HOM05D004086 ORTHO05D004641 1.4e-149 534.3 680 47.8
SMO203G0104 Selaginella moellendorffii HOM05D004086 ORTHO05D004641 3.0e-147 526.6 670 46.4
GSVIVG01018995001 Vitis vinifera HOM05D004086 ORTHO05D004641 4.4e-90 336.7 670 36.7
ATR0064G058 Amborella trichopoda HOM05D004086 ORTHO05D004641 1.1e-88 332.0 664 35.7
TAR628G1622 Trochodendron aralioides HOM05D004086 ORTHO05D004641 7.1e-88 329.3 669 36.5
Gohir.A11G185700 Gossypium hirsutum HOM05D004086 ORTHO05D004641 6.9e-83 312.8 674 35.5
Hma1.2p1_0400F.1_g144650 Hydrangea macrophylla HOM05D004086 ORTHO05D004641 1.2e-82 312.0 677 35.7
Gohir.D11G192200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 2.6e-82 310.8 674 35.3
Gorai.007G205200 Gossypium raimondii HOM05D004086 ORTHO05D004641 5.8e-82 309.7 674 35.3
Cc07_g09240 Coffea canephora HOM05D004086 ORTHO05D004641 2.4e-80 304.3 670 34.3
Duzib264G0994 Durio zibethinus HOM05D004086 ORTHO05D004641 1.6e-79 301.6 677 34.9
Manes.07G068600 Manihot esculenta HOM05D004086 ORTHO05D004641 2.1e-79 301.2 677 34.3
Gohir.D11G227980 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.0e-78 298.9 678 34.1
Actinidia36545 Actinidia chinensis HOM05D004086 ORTHO05D004641 3.0e-78 297.4 677 34.6
Thecc.01G039100 Theobroma cacao HOM05D004086 ORTHO05D004641 6.6e-78 296.2 670 34.3
DCAR_025930 Daucus carota HOM05D004086 ORTHO05D004641 1.5e-77 295.0 694 32.3
Potri.007G028600 Populus trichocarpa HOM05D004086 ORTHO05D004641 9.6e-77 292.4 673 34.0
CsaV3_4G005180 Cucumis sativus L. HOM05D004086 ORTHO05D004641 1.6e-76 291.6 668 33.1
MELO3C017544.2 Cucumis melo HOM05D004086 ORTHO05D004641 8.1e-76 289.3 684 32.7
Prupe.7G151600 Prunus persica HOM05D004086 ORTHO05D004641 1.4e-75 288.5 688 33.7
TWI09G1017 Tripterygium wilfordii HOM05D004086 ORTHO05D004641 1.8e-75 288.1 702 32.5
CSS0022456 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 2.4e-75 287.7 676 33.4
EL10Ac7g17738 Beta vulgaris HOM05D004086 ORTHO05D004641 9.0e-75 285.8 669 31.7
PSO675G7346 Papaver somniferum HOM05D004086 ORTHO05D004641 9.0e-75 285.8 664 34.5
Eucgr.H01260 Eucalyptus grandis HOM05D004086 ORTHO05D004641 1.2e-74 285.4 669 33.6
CSS0048181 Camellia sinensis var. sinensis HOM05D004086 ORTHO05D004641 4.5e-74 283.5 669 33.3
Ciclev10025048m.g Citrus clementina HOM05D004086 ORTHO05D004641 9.9e-74 282.3 659 31.4
Gohir.D11G227900 Gossypium hirsutum HOM05D004086 ORTHO05D004641 1.3e-73 282.0 672 33.3
CANSAT01G2856 Cannabis sativa HOM05D004086 ORTHO05D004641 3.2e-72 277.3 677 32.3
Actinidia12113 Actinidia chinensis HOM05D004086 ORTHO05D004641 2.7e-71 274.2 714 33.1
Lj5A533G14 Lonicera japonica HOM05D004086 ORTHO05D004641 3.5e-71 273.9 704 30.7
Aqoxy6G01048 Aquilegia oxysepala HOM05D004086 ORTHO05D004641 7.9e-71 272.7 684 33.0
MSTRG.23544 Avicennia marina HOM05D004086 ORTHO05D004641 7.9e-71 272.7 707 31.1
RcHm_v2.0_Chr2g0102021 Rosa chinensis HOM05D004086 ORTHO05D004641 3.0e-70 270.8 721 31.8
Sed0023254 Sechium edule HOM05D004086 ORTHO05D004641 3.9e-70 270.4 700 31.7
Lj5g0019705 Lotus japonicus HOM05D004086 ORTHO05D004641 8.7e-70 269.2 691 32.4
Nn5g29538 Nelumbo nucifera HOM05D004086 ORTHO05D004641 1.1e-69 268.9 624 34.0
Sabra07G0024800 Salix brachista HOM05D004086 ORTHO05D004641 1.1e-69 268.9 698 32.2
Dinv39963 Davidia involucrata HOM05D004086 ORTHO05D004641 4.3e-69 266.9 669 32.9
Hund05506 Selenicereus undatus HOM05D004086 ORTHO05D004641 1.3e-68 265.4 690 31.2
Solyc08g078600.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 2.1e-68 264.6 673 31.8
Medtr5g019810 Medicago truncatula HOM05D004086 ORTHO05D004641 3.6e-68 263.8 705 31.9
Sopen08g027080 Solanum pennellii HOM05D004086 ORTHO05D004641 8.1e-68 262.7 673 32.4
vmacro07910 Vaccinium macrocarpon HOM05D004086 ORTHO05D004641 8.1e-68 262.7 686 32.5
MD02G1151400 Malus domestica HOM05D004086 ORTHO05D004641 1.8e-67 261.5 689 31.3
Nitab4.5_0008457g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 5.3e-67 260.0 670 32.4
Rhsim03G0093700 Rhododendron simsii HOM05D004086 ORTHO05D004641 6.9e-67 259.6 703 31.6
PSO541G3560 Papaver somniferum HOM05D004086 ORTHO05D004641 1.5e-66 258.5 662 32.6
FAN26G0470 Fragaria x ananassa HOM05D004086 ORTHO05D004641 3.4e-66 257.3 677 31.0
COL.COLO4_22111 Corchorus olitorius HOM05D004086 ORTHO05D004641 7.6e-66 256.1 657 32.3
FvH4_1g13700 Fragaria vesca HOM05D004086 ORTHO05D004641 9.9e-66 255.8 677 30.7
PGSC0003DMG400004762 Solanum tuberosum HOM05D004086 ORTHO05D004641 1.3e-65 255.4 673 31.5
Lalb_Chr20g0123501 Lupinus albus HOM05D004086 ORTHO05D004641 2.9e-65 254.2 696 31.5
ClCG07G009030 Citrullus lanatus HOM05D004086 ORTHO05D004641 8.4e-65 252.7 678 32.4
FAN19G3131 Fragaria x ananassa HOM05D004086 ORTHO05D004641 1.1e-64 252.3 677 30.3
VMungo1215G0116 Vigna mungo HOM05D004086 ORTHO05D004641 4.2e-64 250.4 679 30.5
Ca_00390_v3 Cicer arietinum L. HOM05D004086 ORTHO05D004641 7.1e-64 249.6 701 30.4
SEGI_33702 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 4.6e-63 246.9 358 46.6
HPP92_015988 Vanilla planifolia HOM05D004086 ORTHO05D004641 6.0e-63 246.5 660 30.6
FAN28G1508 Fragaria x ananassa HOM05D004086 ORTHO05D004641 1.0e-62 245.7 698 30.1
QL06p045466 Quercus lobata HOM05D004086 ORTHO05D004641 8.7e-62 242.7 686 32.2
Glyma.11G009900 Glycine max HOM05D004086 ORTHO05D004641 1.9e-61 241.5 674 31.0
TPR.G18816 Trifolium pratense HOM05D004086 ORTHO05D004641 3.3e-61 240.7 668 30.5
FAN23G2825 Fragaria x ananassa HOM05D004086 ORTHO05D004641 7.4e-61 239.6 698 29.7
Migut.H00181 Erythranthe guttata HOM05D004086 ORTHO05D004641 2.1e-60 238.0 648 32.1
Nitab4.5_0010593g0010 Nicotiana tabacum HOM05D004086 ORTHO05D004641 2.1e-60 238.0 742 30.9
ECA232G4057 Erigeron canadensis HOM05D004086 ORTHO05D001499 3.7e-60 237.3 666 30.2
CAN.G1058.29 Capsicum annuum HOM05D004086 ORTHO05D004641 1.4e-59 235.3 676 30.8
Phvul.002G040400 Phaseolus vulgaris HOM05D004086 ORTHO05D004641 1.4e-59 235.3 681 30.0
arahy.Tifrunner.gnm1.ann1.4T6GLU Arachis hypogaea HOM05D004086 ORTHO05D004641 1.8e-59 235.0 673 30.8
arahy.Tifrunner.gnm1.ann1.FS5W7P Arachis hypogaea HOM05D004086 ORTHO05D004641 1.8e-59 235.0 673 30.6
AUR62008836 Chenopodium quinoa HOM05D004086 ORTHO05D004641 1.8e-59 235.0 678 32.3
THA.LOC104819797 Tarenaya hassleriana HOM05D004086 ORTHO05D004641 1.8e-59 235.0 658 31.2
Carub.0008s0941 Capsella rubella HOM05D004086 ORTHO05D004641 2.4e-59 234.6 701 30.5
Peaxi162Scf00515g00225 Petunia axillaris HOM05D004086 ORTHO05D004641 9.0e-59 232.6 680 31.2
BolC7t44527H Brassica oleracea HOM05D004086 ORTHO05D004641 1.5e-58 231.9 698 28.9
AT5G49530 Arabidopsis thaliana HOM05D004086 ORTHO05D004641 2.0e-58 231.5 673 30.0
A06p38290 Brassica napus HOM05D004086 ORTHO05D004641 2.0e-58 231.5 659 29.6
BraA06t26744Z Brassica rapa HOM05D004086 ORTHO05D004641 3.4e-58 230.7 659 29.6
Sp2g19840 Schrenkiella parvula HOM05D004086 ORTHO05D004641 7.6e-58 229.6 658 28.9
C07p39950 Brassica napus HOM05D004086 ORTHO05D004641 1.0e-57 229.2 657 29.4
ECA238G3830 Erigeron canadensis HOM05D004086 ORTHO05D004641 2.2e-57 228.0 665 30.4
Ah.15g091580 Amaranthus hybridus HOM05D004086 ORTHO05D004641 8.4e-57 226.1 686 31.2
HanXRQChr09g0262111 Helianthus annuus HOM05D004086 ORTHO05D004641 1.1e-56 225.7 667 30.3
DCAR_023357 Daucus carota HOM05D004086 ORTHO05D004641 1.4e-56 225.3 663 28.8
AUR62025406 Chenopodium quinoa HOM05D004086 ORTHO05D004641 3.2e-56 224.2 654 31.8
CiPaw.02G015600 Carya illinoinensis HOM05D004086 ORTHO05D004641 7.1e-56 223.0 672 29.2
CARHR287960 Cardamine hirsuta HOM05D004086 ORTHO05D004641 6.0e-55 219.9 660 30.5
Sopen02g030230 Solanum pennellii HOM05D004086 ORTHO05D004641 1.3e-52 212.2 709 28.2
Solyc02g085560.3 Solanum lycopersicum HOM05D004086 ORTHO05D004641 2.8e-52 211.1 709 28.1
Aa31LG11G8330 Aethionema arabicum HOM05D004086 ORTHO05D004641 8.2e-52 209.5 661 29.3
Thhalv10003751m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 8.2e-52 209.5 653 28.8
COL.COLO4_14865 Corchorus olitorius HOM05D004086 ORTHO05D004641 9.0e-51 206.1 412 34.0
Oeu053005.1 Olea europaea HOM05D004086 ORTHO05D004641 1.5e-50 205.3 420 35.0
Psat2g160960 Pisum sativum HOM05D004086 ORTHO05D004641 9.3e-48 196.1 609 29.1
Ah.15g091670 Amaranthus hybridus HOM05D004086 ORTHO05D004641 2.1e-47 194.9 423 33.6
CDE10G1264 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 7.9e-47 193.0 666 27.3
AL8G23320 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 1.3e-46 192.2 660 28.8
Thhalv10023969m.g Eutrema salsugineum HOM05D004086 ORTHO05D004641 5.1e-46 190.3 449 31.4
unitig_52.g17585 Utricularia gibba HOM05D004086 ORTHO05D004641 5.1e-46 190.3 675 28.0
Atru.chr3.545 Acer truncatum HOM05D004086 ORTHO05D004641 2.2e-44 184.9 409 31.3
CAN.G358.119 Capsicum annuum HOM05D004086 ORTHO05D004641 3.7e-44 184.1 679 27.2
Lsat_1_v5_gn_4_150860 Lactuca sativa HOM05D004086 ORTHO05D004641 3.7e-44 184.1 648 27.0
CDE05G2435 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 3.1e-43 181.0 476 32.6
SpUn0021_0010 Schrenkiella parvula HOM05D004086 ORTHO05D004641 3.1e-43 181.0 405 31.1
TPR.G28496 Trifolium pratense HOM05D004086 ORTHO05D004641 1.9e-40 171.8 406 31.3
Haze_02099 Corylus avellana HOM05D004086 ORTHO05D004641 9.4e-40 169.5 698 26.8
Medtr5g026040 Medicago truncatula HOM05D004086 ORTHO05D004641 1.2e-39 169.1 460 29.8
Sc17g0002710 Simmondsia chinensis HOM05D004086 ORTHO05D004641 1.1e-37 162.5 413 31.2
HPP92_026151 Vanilla planifolia HOM05D004086 ORTHO05D004641 3.3e-37 161.0 374 32.6
Nitab4.5_0001279g0090 Nicotiana tabacum HOM05D004086 ORTHO05D004641 2.2e-36 158.3 560 29.3
Cpa.g.sc353.3 Carica papaya HOM05D004086 ORTHO05D004641 2.4e-35 154.8 473 31.1
Zm00001eb269010 Zea mays HOM05D004086 ORTHO05D004641 3.4e-34 151.0 255 38.0
AL5G27650 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 2.2e-33 148.3 376 31.4
CDE10G0302 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 2.1e-31 141.7 129 53.5
Haze_02100 Corylus avellana HOM05D004086 ORTHO05D004641 1.0e-30 139.4 138 52.2
Lsat_1_v5_gn_4_150881 Lactuca sativa HOM05D004086 ORTHO05D004641 6.7e-30 136.7 664 25.5
Haze_15127 Corylus avellana HOM05D004086 ORTHO05D004641 5.7e-29 133.7 545 28.1
MCO01G289 Micromonas commoda HOM05D004086 ORTHO05D004641 1.4e-27 129.0 663 25.8
MD15G1266000 Malus domestica HOM05D004086 ORTHO05D004641 1.2e-26 125.9 618 26.4
AL253U10010 Arabidopsis lyrata HOM05D004086 ORTHO05D004641 4.2e-24 117.5 136 47.1
FvH4_2g10200 Fragaria vesca HOM05D004086 ORTHO05D004641 2.7e-23 114.8 392 27.8
CDE05G1436 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 4.7e-23 114.0 152 41.4
Nitab4.5_0004445g0020 Nicotiana tabacum HOM05D004086 ORTHO05D004641 5.2e-22 110.5 358 27.9
PRCOL_00000416 Prasinoderma coloniale HOM05D004086 ORTHO05D004641 6.7e-22 110.2 416 27.4
CDE10G0017 Ceratophyllum demersum HOM05D004086 ORTHO05D004641 5.7e-21 107.1 156 43.6
SEGI_29880 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 8.2e-20 103.2 79 59.5
PSO017G0414 Papaver somniferum HOM05D004086 ORTHO05D004641 1.1e-19 102.8 122 43.4
A02p38220 Brassica napus HOM05D004086 ORTHO05D004641 1.4e-19 102.4 143 42.7
Cpa.g.sc353.1 Carica papaya HOM05D004086 ORTHO05D004641 5.3e-19 100.5 106 48.1
SEGI_38277 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 9.1e-19 99.8 160 45.0
SEGI_37045 Sequoiadendron giganteum HOM05D037714 ORTHO05D004641 1.2e-18 99.4 157 38.9
Cre10.g454650 Chlamydomonas reinhardtii HOM05D004086 ORTHO05D004641 3.5e-18 97.8 140 40.0
BcaC03g17736 Brassica carinata HOM05D004086 ORTHO05D004641 4.5e-18 97.4 133 42.1
CARHR050710 Cardamine hirsuta HOM05D004086 ORTHO05D004641 1.7e-17 95.5 227 31.3
Haze_15116 Corylus avellana HOM05D004086 ORTHO05D004641 1.7e-17 95.5 79 57.0
SEGI_36884 Sequoiadendron giganteum HOM05D004086 ORTHO05D004641 1.7e-17 95.5 122 45.9
Ah.15g091620 Amaranthus hybridus HOM05D004086 ORTHO05D004641 4.0e-14 84.3 100 42.0
C02p57460 Brassica napus HOM05D004086 ORTHO05D004641 9.8e-13 79.7 133 37.6
FAN24G1278 Fragaria x ananassa HOM05D004086 ORTHO05D004641 2.7e-10 71.6 129 34.9
BolC2t11821H Brassica oleracea HOM05D004086 ORTHO05D004641 5.9e-10 70.5 67 50.7
MELO3C034917.2 Cucumis melo HOM05D004086 ORTHO05D004641 5.9e-10 70.5 50 62.0
AUR62025404 Chenopodium quinoa HOM05D000200 ORTHO05D000262 8.6e-09 66.6 129 33.3
SHI06749 Sapria himalayana HOM05D004086 ORTHO05D004641 2.5e-08 65.1 78 43.6
Gohir.A11G236200 Gossypium hirsutum HOM05D004086 ORTHO05D004641 4.2e-08 64.3 46 63.0
Oeu053017.4 Olea europaea HOM05D004086 ORTHO05D004641 4.7e-07 60.8 120 41.7
Lj4A239T53 Lonicera japonica HOM05D004086 ORTHO05D004641 1.8e-06 58.9 134 35.1


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