Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50773 Chara braunii HOM05D007635 ORTHO05D009612 5.9e-161 570.9 299 100.0
AagrBONN_evm.TU.Sc2ySwM_362.2476 Anthoceros agrestis HOM05D007635 ORTHO05D009612 1.2e-33 147.9 94 76.6
Pp3c11_15670 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.6e-33 147.5 124 58.9
Ciclev10006014m.g Citrus clementina HOM05D007635 ORTHO05D009612 2.1e-33 147.1 97 72.2
ATR0751G143 Amborella trichopoda HOM05D007635 ORTHO05D009612 2.8e-33 146.7 93 74.2
Eucgr.K02034 Eucalyptus grandis HOM05D007635 ORTHO05D009612 3.6e-33 146.4 97 74.2
Potri.001G053700 Populus trichocarpa HOM05D007635 ORTHO05D009612 3.6e-33 146.4 97 73.2
SEGI_23489 Sequoiadendron giganteum HOM05D007635 ORTHO05D009612 3.6e-33 146.4 99 67.7
Lj1g0026019 Lotus japonicus HOM05D007635 ORTHO05D009612 4.7e-33 146.0 143 53.1
Prupe.7G097800 Prunus persica HOM05D007635 ORTHO05D009612 4.7e-33 146.0 157 51.6
arahy.Tifrunner.gnm1.ann1.X3I9NV Arachis hypogaea HOM05D007635 ORTHO05D009612 6.2e-33 145.6 152 54.6
GSVIVG01030149001 Vitis vinifera HOM05D007635 ORTHO05D009612 6.2e-33 145.6 98 71.4
Ah.05g169970 Amaranthus hybridus HOM05D007635 ORTHO05D009612 8.0e-33 145.2 94 73.4
Eucgr.L01778 Eucalyptus grandis HOM05D007635 ORTHO05D009612 8.0e-33 145.2 97 73.2
CiPaw.09G019400 Carya illinoinensis HOM05D007635 ORTHO05D009612 1.4e-32 144.4 93 75.3
AT2G33180 Arabidopsis thaliana HOM05D007635 ORTHO05D009612 1.8e-32 144.1 159 52.8
Carub.0004s1461 Capsella rubella HOM05D007635 ORTHO05D009612 1.8e-32 144.1 140 54.3
Cfa016671 Carpinus fangiana HOM05D003127 ORTHO05D003709 1.8e-32 144.1 93 75.3
Haze_19686 Corylus avellana HOM05D007635 ORTHO05D009612 1.8e-32 144.1 93 75.3
Manes.15G049600 Manihot esculenta HOM05D007635 ORTHO05D009612 2.3e-32 143.7 97 73.2
FAN02G0889 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.0e-32 142.9 95 72.6
FAN05G0948 Fragaria x ananassa HOM05D007635 ORTHO05D009612 4.0e-32 142.9 95 72.6
MSTRG.12845 Avicennia marina HOM05D007635 ORTHO05D009612 5.2e-32 142.5 124 62.1
Glyma.19G198300 Glycine max HOM05D007635 ORTHO05D009612 5.2e-32 142.5 93 75.3
Lalb_Chr20g0111441 Lupinus albus HOM05D007635 ORTHO05D009612 5.2e-32 142.5 93 74.2
RcHm_v2.0_Chr3g0475481 Rosa chinensis HOM05D007635 ORTHO05D009612 5.2e-32 142.5 95 71.6
FvH4_6g20030 Fragaria vesca HOM05D007635 ORTHO05D009612 8.9e-32 141.7 95 71.6
FAN09G2965 Fragaria x ananassa HOM05D007635 ORTHO05D009612 8.9e-32 141.7 95 71.6
FAN14G1263 Fragaria x ananassa HOM05D007635 ORTHO05D009612 8.9e-32 141.7 95 71.6
Psat3g030120 Pisum sativum HOM05D003127 ORTHO05D003709 8.9e-32 141.7 157 52.2
Phvul.001G194300 Phaseolus vulgaris HOM05D007635 ORTHO05D009612 1.2e-31 141.4 93 72.0
QL07p037425 Quercus lobata HOM05D007635 ORTHO05D009612 1.2e-31 141.4 135 57.0
Glyma.03G200700 Glycine max HOM05D007635 ORTHO05D009612 2.0e-31 140.6 93 74.2
VMungo1383G2560 Vigna mungo HOM05D007635 ORTHO05D009612 2.0e-31 140.6 93 71.0
Actinidia12337 Actinidia chinensis HOM05D007635 ORTHO05D009612 2.6e-31 140.2 118 59.3
AL4G28740 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.6e-31 140.2 151 51.0
AL569U10010 Arabidopsis lyrata HOM05D007635 ORTHO05D009612 2.6e-31 140.2 151 51.0
Nn1g07615 Nelumbo nucifera HOM05D007635 ORTHO05D009612 3.4e-31 139.8 92 72.8
Peaxi162Scf00035g02213 Petunia axillaris HOM05D007635 ORTHO05D009612 3.4e-31 139.8 151 53.6
TPR.G23321 Trifolium pratense HOM05D007635 ORTHO05D009612 3.4e-31 139.8 158 50.6
Duzib268G0659 Durio zibethinus HOM05D007635 ORTHO05D009612 4.4e-31 139.4 97 70.1
Dinv26633 Davidia involucrata HOM05D007635 ORTHO05D009612 5.8e-31 139.0 93 72.0
Gorai.011G162800 Gossypium raimondii HOM05D007635 ORTHO05D009612 5.8e-31 139.0 100 68.0
CARHR127160 Cardamine hirsuta HOM05D007635 ORTHO05D009612 7.5e-31 138.7 162 49.4
Lsat_1_v5_gn_7_99401 Lactuca sativa HOM05D007635 ORTHO05D009612 7.5e-31 138.7 99 68.7
Medtr7g105840 Medicago truncatula HOM05D007635 ORTHO05D009612 7.5e-31 138.7 93 71.0
unitig_26.g8994 Utricularia gibba HOM05D007635 ORTHO05D009612 7.5e-31 138.7 93 72.0
Sc26g0000090 Simmondsia chinensis HOM05D007635 ORTHO05D009612 9.8e-31 138.3 147 52.4
CAN.G904.10 Capsicum annuum HOM05D007635 ORTHO05D009612 1.3e-30 137.9 93 69.9
CsaV3_3G037770 Cucumis sativus L. HOM05D007635 ORTHO05D009612 1.3e-30 137.9 93 72.0
PSO541G5044 Papaver somniferum HOM05D007635 ORTHO05D009612 1.3e-30 137.9 93 67.7
PSO675G5663 Papaver somniferum HOM05D007635 ORTHO05D009612 1.3e-30 137.9 93 67.7
Aa31LG5G4080 Aethionema arabicum HOM05D007635 ORTHO05D009612 1.7e-30 137.5 93 68.8
CSS0021722 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 1.7e-30 137.5 98 69.4
Ca_09045_v3 Cicer arietinum L. HOM05D007635 ORTHO05D009612 1.7e-30 137.5 93 71.0
Nitab4.5_0000923g0190 Nicotiana tabacum HOM05D007635 ORTHO05D009612 1.7e-30 137.5 149 51.7
PGR142G1826 Punica granatum HOM05D007635 ORTHO05D009612 1.7e-30 137.5 97 66.0
BcaB06g28657 Brassica carinata HOM05D007635 ORTHO05D009612 2.2e-30 137.1 100 67.0
A04p25480 Brassica napus HOM05D007635 ORTHO05D009612 2.2e-30 137.1 100 67.0
BraA04t18051Z Brassica rapa HOM05D007635 ORTHO05D009612 2.2e-30 137.1 100 67.0
CSS0041027 Camellia sinensis var. sinensis HOM05D007635 ORTHO05D009612 2.2e-30 137.1 153 52.3
ClCG10G018500 Citrullus lanatus HOM05D003127 ORTHO05D003709 2.2e-30 137.1 93 72.0
BcaC02g07856 Brassica carinata HOM05D007635 ORTHO05D009612 2.9e-30 136.7 100 66.0
BolC4t27744H Brassica oleracea HOM05D007635 ORTHO05D009612 2.9e-30 136.7 100 66.0
Thhalv10017331m.g Eutrema salsugineum HOM05D007635 ORTHO05D009612 3.7e-30 136.3 100 66.0
Sp4g15480 Schrenkiella parvula HOM05D007635 ORTHO05D009612 3.7e-30 136.3 100 66.0
C04p62620 Brassica napus HOM05D007635 ORTHO05D009612 4.9e-30 136.0 100 66.0
Cc05_g09950 Coffea canephora HOM05D007635 ORTHO05D009612 4.9e-30 136.0 118 61.0
CANSAT64G1146 Cannabis sativa HOM05D007635 ORTHO05D009612 8.3e-30 135.2 161 46.6
AUR62027757 Chenopodium quinoa HOM05D007635 ORTHO05D009612 8.3e-30 135.2 94 68.1
AUR62038521 Chenopodium quinoa HOM05D007635 ORTHO05D009612 8.3e-30 135.2 94 68.1
TWI09G0209 Tripterygium wilfordii HOM05D007635 ORTHO05D009612 1.1e-29 134.8 121 60.3
Solyc10g007670.4 Solanum lycopersicum HOM05D007635 ORTHO05D009612 1.9e-29 134.0 93 67.7
Sopen10g003580 Solanum pennellii HOM05D007635 ORTHO05D009612 1.9e-29 134.0 93 67.7
PGSC0003DMG400021288 Solanum tuberosum HOM05D007635 ORTHO05D009612 1.9e-29 134.0 93 67.7
TAR374G1245 Trochodendron aralioides HOM05D007635 ORTHO05D009612 1.9e-29 134.0 93 68.8
ECA236G3620 Erigeron canadensis HOM05D007635 ORTHO05D009612 4.1e-29 132.9 93 68.8
Rhsim06G0182000 Rhododendron simsii HOM05D007635 ORTHO05D009612 4.1e-29 132.9 98 67.3
Rhsim06G0183000 Rhododendron simsii HOM05D007635 ORTHO05D009612 4.1e-29 132.9 98 67.3
COL.COLO4_05721 Corchorus olitorius HOM05D001044 ORTHO05D007204 1.6e-28 131.0 97 68.0
Os09g0481800 Oryza sativa ssp. japonica HOM05D007635 ORTHO05D009612 1.6e-28 131.0 108 59.3
MBI15_g47427_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 4.6e-28 129.4 156 48.1
MBI15_g36010_MAGBIO Magnolia biondii HOM05D007635 ORTHO05D009612 6.0e-28 129.0 93 68.8
Zm00001eb101710 Zea mays HOM05D007635 ORTHO05D009612 1.0e-27 128.3 92 66.3
SGA_v2.0_scaffold130G34228 Striga asiatica HOM05D007635 ORTHO05D009612 3.3e-26 123.2 160 48.8
vmacro12032 Vaccinium macrocarpon HOM05D007635 ORTHO05D009612 3.3e-26 123.2 111 59.5
EL10Ac1g01217 Beta vulgaris HOM05D007635 ORTHO05D009612 2.1e-25 120.6 78 73.1
Atru.BG.99.p Acer truncatum HOM05D007635 ORTHO05D009612 1.4e-24 117.9 71 76.1
MD12G1037400 Malus domestica HOM05D007635 ORTHO05D009612 5.8e-23 112.5 74 70.3
Aqoxy2G03911 Aquilegia oxysepala HOM05D007635 ORTHO05D009612 1.7e-22 110.9 134 45.5
HanXRQChr11g0329581 Helianthus annuus HOM05D007635 ORTHO05D009612 8.3e-22 108.6 64 78.1
Nitab4.5_0002209g0110 Nicotiana tabacum HOM05D007635 ORTHO05D009612 3.2e-21 106.7 132 45.5
FAN05G1739 Fragaria x ananassa HOM05D007635 ORTHO05D009612 1.2e-20 104.8 62 79.0
Cpa.g.sc59.77 Carica papaya HOM05D007635 ORTHO05D009612 6.0e-20 102.4 65 75.4
MELO3C009519.2 Cucumis melo HOM05D003127 ORTHO05D003709 8.6e-19 98.6 63 71.4
HPP92_017857 Vanilla planifolia HOM05D007635 ORTHO05D009612 1.1e-18 98.2 75 62.7
Pp3c11_15610 Physcomitrium patens HOM05D007635 ORTHO05D009612 1.9e-18 97.4 62 69.4
Sed0019283 Sechium edule HOM05D003127 ORTHO05D003709 5.6e-18 95.9 63 66.7
Migut.H02083 Erythranthe guttata HOM05D007635 ORTHO05D009612 4.7e-17 92.8 112 45.5


User provided reference genes

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