Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50745 Chara braunii HOM05D006961 ORTHO05D008809 3.2e-151 538.5 290 100.0
AagrBONN_evm.TU.Sc2ySwM_228.3757 Anthoceros agrestis HOM05D006961 ORTHO05D008809 3.4e-20 103.2 114 51.8
SEGI_13566 Sequoiadendron giganteum HOM05D006961 ORTHO05D008809 4.2e-18 96.3 145 42.1
Mapoly0047s0086 Marchantia polymorpha HOM05D006961 ORTHO05D008809 4.6e-17 92.8 148 39.2
Ah.03g139190 Amaranthus hybridus HOM05D006961 ORTHO05D008809 1.3e-16 91.3 114 43.0
AUR62003136 Chenopodium quinoa HOM05D006961 ORTHO05D008809 3.0e-16 90.1 114 43.0
Glyma.01G055400 Glycine max HOM05D006961 ORTHO05D008809 3.9e-16 89.7 114 42.1
AUR62007955 Chenopodium quinoa HOM05D006961 ORTHO05D008809 1.1e-15 88.2 114 41.2
arahy.Tifrunner.gnm1.ann1.T2VQ83 Arachis hypogaea HOM05D006961 ORTHO05D008809 1.5e-15 87.8 119 42.0
GSVIVG01012179001 Vitis vinifera HOM05D006961 ORTHO05D008809 1.5e-15 87.8 99 46.5
Glyma.02G113800 Glycine max HOM05D006961 ORTHO05D008809 1.9e-15 87.4 114 41.2
HanXRQChr12g0379241 Helianthus annuus HOM05D006961 ORTHO05D008809 2.5e-15 87.0 118 42.4
Potri.010G161400 Populus trichocarpa HOM05D006961 ORTHO05D008809 2.5e-15 87.0 118 41.5
arahy.Tifrunner.gnm1.ann1.TP0XC6 Arachis hypogaea HOM05D006961 ORTHO05D008809 4.3e-15 86.3 119 42.0
VMungo1215G1627 Vigna mungo HOM05D006961 ORTHO05D008809 5.6e-15 85.9 114 41.2
Ciclev10032810m.g Citrus clementina HOM05D006961 ORTHO05D008809 7.3e-15 85.5 117 41.0
Nn3g17372 Nelumbo nucifera HOM05D006961 ORTHO05D008809 9.6e-15 85.1 97 46.4
Aqoxy3G00448 Aquilegia oxysepala HOM05D006961 ORTHO05D008809 1.3e-14 84.7 112 41.1
MELO3C002920.2 Cucumis melo HOM05D006961 ORTHO05D008809 1.6e-14 84.3 118 42.4
QL03p070935 Quercus lobata HOM05D006961 ORTHO05D008809 1.6e-14 84.3 114 41.2
EL10Ac6g14957 Beta vulgaris HOM05D006961 ORTHO05D008809 2.1e-14 84.0 129 38.8
CiPaw.06G090400 Carya illinoinensis HOM05D006961 ORTHO05D008809 2.1e-14 84.0 92 46.7
ClCG09G020750 Citrullus lanatus HOM05D006961 ORTHO05D008809 2.1e-14 84.0 118 42.4
CsaV3_5G025620 Cucumis sativus L. HOM05D006961 ORTHO05D008809 3.6e-14 83.2 118 42.4
HPP92_023640 Vanilla planifolia HOM05D006961 ORTHO05D008809 3.6e-14 83.2 166 34.3
FAN07G0372 Fragaria x ananassa HOM05D006961 ORTHO05D008809 4.8e-14 82.8 156 37.8
FAN17G2308 Fragaria x ananassa HOM05D006961 ORTHO05D008809 4.8e-14 82.8 156 37.8
Psat2g128160 Pisum sativum HOM05D006961 ORTHO05D008809 4.8e-14 82.8 114 41.2
COL.COLO4_27931 Corchorus olitorius HOM05D006961 ORTHO05D008809 6.2e-14 82.4 99 40.4
Hund05862 Selenicereus undatus HOM05D006961 ORTHO05D008809 6.2e-14 82.4 149 36.2
ECA234G0986 Erigeron canadensis HOM05D006961 ORTHO05D008809 8.1e-14 82.0 118 39.8
Thecc.02G336300 Theobroma cacao HOM05D006961 ORTHO05D008809 8.1e-14 82.0 114 39.5
TAR622G0866 Trochodendron aralioides HOM05D006961 ORTHO05D008809 8.1e-14 82.0 114 41.2
Ca_04910_v3 Cicer arietinum L. HOM05D006961 ORTHO05D008809 1.1e-13 81.6 114 40.4
FvH4_4g30480 Fragaria vesca HOM05D006961 ORTHO05D008809 1.1e-13 81.6 156 37.8
Sed0005182 Sechium edule HOM05D006961 ORTHO05D008809 1.1e-13 81.6 118 42.4
Duzib268G0330 Durio zibethinus HOM05D006961 ORTHO05D008809 1.4e-13 81.3 108 40.7
Eucgr.G02462 Eucalyptus grandis HOM05D006961 ORTHO05D008809 1.4e-13 81.3 114 40.4
Hma1.2p1_0357F.1_g134450 Hydrangea macrophylla HOM05D006961 ORTHO05D008809 1.4e-13 81.3 114 38.6
Lj2g0005939 Lotus japonicus HOM05D006961 ORTHO05D008809 1.4e-13 81.3 113 42.5
MD13G1065900 Malus domestica HOM05D006961 ORTHO05D008809 1.4e-13 81.3 121 37.2
Peaxi162Scf00314g00025 Petunia axillaris HOM05D006961 ORTHO05D008809 1.4e-13 81.3 114 41.2
Nitab4.5_0000334g0230 Nicotiana tabacum HOM05D006961 ORTHO05D008809 1.8e-13 80.9 114 39.5
Solyc05g012600.3 Solanum lycopersicum HOM05D006961 ORTHO05D008809 2.4e-13 80.5 114 38.6
Sopen05g007430 Solanum pennellii HOM05D006961 ORTHO05D008809 2.4e-13 80.5 114 38.6
TPR.G24476 Trifolium pratense HOM05D006961 ORTHO05D008809 2.4e-13 80.5 112 41.1
CANSAT64G0471 Cannabis sativa HOM05D006961 ORTHO05D008809 3.1e-13 80.1 156 35.3
CDE07G0364 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 3.1e-13 80.1 100 41.0
Gohir.A05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.1e-13 80.1 99 39.4
Gohir.D05G306100 Gossypium hirsutum HOM05D006961 ORTHO05D008809 3.1e-13 80.1 99 39.4
Manes.05G107700 Manihot esculenta HOM05D006961 ORTHO05D008809 3.1e-13 80.1 118 39.8
PGSC0003DMG400028327 Solanum tuberosum HOM05D006961 ORTHO05D008809 3.1e-13 80.1 114 38.6
Haze_11979 Corylus avellana HOM05D006961 ORTHO05D004702 4.0e-13 79.7 103 41.7
PGR119G1669 Punica granatum HOM05D006961 ORTHO05D008809 4.0e-13 79.7 114 41.2
AL5G13170 Arabidopsis lyrata HOM05D006961 ORTHO05D008809 5.3e-13 79.3 115 40.0
Pp3c5_22460 Physcomitrium patens HOM05D006961 ORTHO05D008809 5.3e-13 79.3 114 40.4
Prupe.1G282200 Prunus persica HOM05D006961 ORTHO05D008809 5.3e-13 79.3 120 39.2
MBI16_g15564_MAGBIO Magnolia biondii HOM05D006961 ORTHO05D008809 6.9e-13 79.0 116 37.9
Oeu015341.2 Olea europaea HOM05D006961 ORTHO05D008809 6.9e-13 79.0 123 37.4
MSTRG.7764 Avicennia marina HOM05D006961 ORTHO05D008809 9.0e-13 78.6 114 39.5
CAN.G1340.11 Capsicum annuum HOM05D006961 ORTHO05D008809 9.0e-13 78.6 114 38.6
Lsat_1_v5_gn_4_10260 Lactuca sativa HOM05D006961 ORTHO05D008809 9.0e-13 78.6 118 37.3
Lalb_Chr17g0341001 Lupinus albus HOM05D006961 ORTHO05D008809 9.0e-13 78.6 114 38.6
RcHm_v2.0_Chr4g0438851 Rosa chinensis HOM05D006961 ORTHO05D008809 9.0e-13 78.6 138 36.2
Sc04g0007750 Simmondsia chinensis HOM05D006961 ORTHO05D008809 9.0e-13 78.6 95 43.2
Aa31LG2G7160 Aethionema arabicum HOM05D006961 ORTHO05D008809 1.2e-12 78.2 114 38.6
Medtr5g043580 Medicago truncatula HOM05D006961 ORTHO05D008809 1.2e-12 78.2 108 41.7
SMO356G0726 Selaginella moellendorffii HOM05D006961 ORTHO05D008809 1.2e-12 78.2 119 41.2
ATR0111G017 Amborella trichopoda HOM05D006961 ORTHO05D008809 1.5e-12 77.8 116 37.9
AT2G03420 Arabidopsis thaliana HOM05D006961 ORTHO05D008809 1.5e-12 77.8 115 39.1
FAN22G0366 Fragaria x ananassa HOM05D006961 ORTHO05D008809 1.5e-12 77.8 156 36.5
Migut.L01221 Erythranthe guttata HOM05D006961 ORTHO05D008809 2.0e-12 77.4 114 37.7
THA.LOC104824066 Tarenaya hassleriana HOM05D006961 ORTHO05D008809 2.0e-12 77.4 108 40.7
TWI75G1056 Tripterygium wilfordii HOM05D006961 ORTHO05D008809 2.0e-12 77.4 114 39.5
Atru.chr11.1688 Acer truncatum HOM05D006961 ORTHO05D008809 2.6e-12 77.0 135 33.3
SalBow2G3426 Salvia bowleyana HOM05D006961 ORTHO05D008809 3.4e-12 76.6 114 39.5
BcaC04g21488 Brassica carinata HOM05D006961 ORTHO05D008809 4.5e-12 76.3 115 38.3
A09p24430 Brassica napus HOM05D006961 ORTHO05D008809 4.5e-12 76.3 115 38.3
C09p31220 Brassica napus HOM05D006961 ORTHO05D008809 4.5e-12 76.3 115 38.3
BolC9t55978H Brassica oleracea HOM05D006961 ORTHO05D008809 4.5e-12 76.3 115 38.3
BraA09t38036Z Brassica rapa HOM05D006961 ORTHO05D008809 4.5e-12 76.3 115 38.3
MD16G1064700 Malus domestica HOM05D006961 ORTHO05D008809 4.5e-12 76.3 99 40.4
Carub.0005s0238 Capsella rubella HOM05D006961 ORTHO05D008809 5.8e-12 75.9 118 39.8
SGA_v2.0_scaffold16G07754 Striga asiatica HOM05D006961 ORTHO05D008809 5.8e-12 75.9 114 39.5
BcaB07g30670 Brassica carinata HOM05D006961 ORTHO05D008809 7.6e-12 75.5 115 37.4
CARHR145760 Cardamine hirsuta HOM05D006961 ORTHO05D008809 7.6e-12 75.5 118 38.1
CDE04G0363 Ceratophyllum demersum HOM05D006961 ORTHO05D008809 7.6e-12 75.5 97 40.2
CSS0004568 Camellia sinensis var. sinensis HOM05D006961 ORTHO05D008809 9.9e-12 75.1 117 39.3
DCAR_027451 Daucus carota HOM05D006961 ORTHO05D008809 9.9e-12 75.1 117 38.5
PSO478G0730 Papaver somniferum HOM05D006961 ORTHO05D008809 9.9e-12 75.1 90 44.4
Thhalv10005024m.g Eutrema salsugineum HOM05D006961 ORTHO05D008809 1.3e-11 74.7 115 37.4
Actinidia19920 Actinidia chinensis HOM05D006961 ORTHO05D008809 1.7e-11 74.3 118 37.3
Cfa008905 Carpinus fangiana HOM05D006961 ORTHO05D008809 1.7e-11 74.3 118 37.3
Sp2g14330 Schrenkiella parvula HOM05D006961 ORTHO05D008809 1.7e-11 74.3 115 39.1
A02p33440 Brassica napus HOM05D006961 ORTHO05D008809 2.9e-11 73.6 115 36.5
Zm00001eb400470 Zea mays HOM05D006961 ORTHO05D008809 2.9e-11 73.6 111 37.8
Dinv34116 Davidia involucrata HOM05D006961 ORTHO05D008809 3.8e-11 73.2 114 37.7
PSO017G3353 Papaver somniferum HOM05D006961 ORTHO05D008809 3.8e-11 73.2 90 43.3
unitig_22.g6499 Utricularia gibba HOM05D006961 ORTHO05D008809 3.8e-11 73.2 114 37.7
Cc11_g12360 Coffea canephora HOM05D006961 ORTHO05D008809 4.2e-10 69.7 114 36.0
vmacro01328 Vaccinium macrocarpon HOM05D006961 ORTHO05D008809 1.2e-09 68.2 99 36.4
Cpa.g.sc1.93 Carica papaya HOM05D006961 ORTHO05D008809 1.6e-09 67.8 122 36.1
HPP92_023624 Vanilla planifolia HOM05D006961 ORTHO05D008809 2.1e-09 67.4 138 34.1
Lj3A1032T68 Lonicera japonica HOM05D006961 ORTHO05D008809 2.7e-09 67.0 126 32.5
Rhsim12G0076500 Rhododendron simsii HOM05D006961 ORTHO05D008809 7.9e-09 65.5 100 38.0
Zm00001eb176890 Zea mays HOM05D006961 ORTHO05D008809 1.5e-07 61.2 97 37.1


User provided reference genes

Program Settings