Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50691 Chara braunii HOM05D005166 ORTHO05D006120 0.0e+00 1364.7 937 100.0
Pp3c3_30240 Physcomitrium patens HOM05D005166 ORTHO05D006120 6.6e-57 226.9 170 71.2
Pp3c3_30241 Physcomitrium patens HOM05D005166 ORTHO05D006120 6.6e-57 226.9 170 71.2
ATR0559G187 Amborella trichopoda HOM05D005166 ORTHO05D006120 2.1e-55 221.9 171 67.8
Pp3c10_18390 Physcomitrium patens HOM05D005166 ORTHO05D006120 3.1e-54 218.0 203 62.1
Lalb_Chr03g0026441 Lupinus albus HOM05D005166 ORTHO05D006120 5.2e-54 217.2 174 63.2
Nn2g11213 Nelumbo nucifera HOM05D005166 ORTHO05D006120 2.0e-53 215.3 173 66.5
GSVIVG01024906001 Vitis vinifera HOM05D005166 ORTHO05D006120 2.0e-53 215.3 173 65.3
CsaV3_1G034540 Cucumis sativus L. HOM05D005166 ORTHO05D006120 5.8e-53 213.8 171 65.5
Hund04921 Selenicereus undatus HOM05D005166 ORTHO05D006120 5.8e-53 213.8 173 65.9
Os03g0270200 Oryza sativa ssp. japonica HOM05D005166 ORTHO05D006120 7.5e-53 213.4 176 64.8
Sed0011931 Sechium edule HOM05D005166 ORTHO05D006120 7.5e-53 213.4 171 64.9
COL.COLO4_18578 Corchorus olitorius HOM05D005166 ORTHO05D006120 9.8e-53 213.0 171 64.9
Dinv17047 Davidia involucrata HOM05D005166 ORTHO05D006120 9.8e-53 213.0 173 65.9
Dinv42991 Davidia involucrata HOM05D005166 ORTHO05D006120 9.8e-53 213.0 173 65.9
Dinv43106 Davidia involucrata HOM05D005166 ORTHO05D006120 9.8e-53 213.0 173 65.9
MBI14_g11598_MAGBIO Magnolia biondii HOM05D005166 ORTHO05D006120 9.8e-53 213.0 154 72.1
AagrBONN_evm.TU.Sc2ySwM_117.3439 Anthoceros agrestis HOM05D005166 ORTHO05D006120 1.3e-52 212.6 170 68.8
Rhsim13G0077000 Rhododendron simsii HOM05D005166 ORTHO05D006120 1.3e-52 212.6 173 64.7
Atru.chr3.3993_Atru.chr3.3994 Acer truncatum HOM05D005166 ORTHO05D006120 1.7e-52 212.2 173 64.7
arahy.Tifrunner.gnm1.ann1.L8ZXQA Arachis hypogaea HOM05D005166 ORTHO05D006120 1.7e-52 212.2 173 63.6
Lalb_Chr01g0003471 Lupinus albus HOM05D005166 ORTHO05D006120 1.7e-52 212.2 172 64.0
Thecc.09G315500 Theobroma cacao HOM05D005166 ORTHO05D006120 1.7e-52 212.2 171 65.5
Gohir.D13G232000 Gossypium hirsutum HOM05D005166 ORTHO05D006120 2.2e-52 211.8 171 64.9
Dinv34287 Davidia involucrata HOM05D005166 ORTHO05D006120 2.9e-52 211.5 173 64.7
SEGI_12829 Sequoiadendron giganteum HOM05D005166 ORTHO05D006120 2.9e-52 211.5 200 61.5
Zm00001eb012100 Zea mays HOM05D005166 ORTHO05D006120 2.9e-52 211.5 173 64.7
Gohir.A13G226600 Gossypium hirsutum HOM05D005166 ORTHO05D006120 4.9e-52 210.7 171 64.9
Duzib168G0713 Durio zibethinus HOM05D005166 ORTHO05D006120 6.4e-52 210.3 171 64.3
Hma1.2p1_1664F.1_g296420 Hydrangea macrophylla HOM05D005166 ORTHO05D006120 6.4e-52 210.3 173 64.7
Eucgr.B02307 Eucalyptus grandis HOM05D005166 ORTHO05D006120 8.3e-52 209.9 173 64.7
Medtr4g064740 Medicago truncatula HOM05D005166 ORTHO05D006120 8.3e-52 209.9 174 62.1
VMungo1127G2033 Vigna mungo HOM05D005166 ORTHO05D006120 8.3e-52 209.9 173 61.3
Lalb_Chr19g0137981 Lupinus albus HOM05D005166 ORTHO05D006120 1.1e-51 209.5 171 62.0
Manes.01G169300 Manihot esculenta HOM05D005166 ORTHO05D006120 1.1e-51 209.5 175 62.9
Peaxi162Scf00676g00220 Petunia axillaris HOM05D005166 ORTHO05D006120 1.1e-51 209.5 171 62.0
Aqoxy2G02310 Aquilegia oxysepala HOM05D005166 ORTHO05D006120 1.4e-51 209.1 171 65.5
CSS0046995 Camellia sinensis var. sinensis HOM05D005166 ORTHO05D006120 1.4e-51 209.1 175 64.6
Nn2g13459 Nelumbo nucifera HOM05D005166 ORTHO05D006120 1.4e-51 209.1 173 64.2
SGA_v2.0_scaffold111G31544 Striga asiatica HOM05D005166 ORTHO05D006120 1.4e-51 209.1 155 69.0
CiPaw.13G089200 Carya illinoinensis HOM05D005166 ORTHO05D006120 2.4e-51 208.4 171 63.7
Glyma.11G136000 Glycine max HOM05D005166 ORTHO05D006120 2.4e-51 208.4 173 61.8
Glyma.12G059700 Glycine max HOM05D005166 ORTHO05D006120 2.4e-51 208.4 173 61.3
Gorai.013G262700 Gossypium raimondii HOM05D005166 ORTHO05D006120 2.4e-51 208.4 171 64.3
vmacro03027 Vaccinium macrocarpon HOM05D005166 ORTHO05D006120 2.4e-51 208.4 173 63.6
Cc01_g13350 Coffea canephora HOM05D005166 ORTHO05D006120 3.2e-51 208.0 171 64.3
Phvul.011G061700 Phaseolus vulgaris HOM05D005166 ORTHO05D006120 5.4e-51 207.2 173 60.7
TAR633G1610 Trochodendron aralioides HOM05D005166 ORTHO05D006120 5.4e-51 207.2 155 69.0
Ca_20616_v3 Cicer arietinum L. HOM05D005166 ORTHO05D006120 7.1e-51 206.8 173 61.8
Lj3g0025501 Lotus japonicus HOM05D005166 ORTHO05D006120 7.1e-51 206.8 173 61.8
Psat7g210320 Pisum sativum HOM05D005166 ORTHO05D006120 1.6e-50 205.7 173 60.7
EL10Ac7g16070 Beta vulgaris HOM05D005166 ORTHO05D006120 2.7e-50 204.9 157 68.2
PGSC0003DMG400027986 Solanum tuberosum HOM05D005166 ORTHO05D006120 3.5e-50 204.5 171 61.4
CDE07G0344 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 4.6e-50 204.1 158 67.1
Potri.001G244600 Populus trichocarpa HOM05D005166 ORTHO05D006120 6.0e-50 203.8 166 65.7
TPR.G23607 Trifolium pratense HOM05D005166 ORTHO05D006120 6.0e-50 203.8 173 61.3
PSO339G5769 Papaver somniferum HOM05D005166 ORTHO05D006120 7.8e-50 203.4 169 65.7
HPP92_012608 Vanilla planifolia HOM05D005166 ORTHO05D006120 7.8e-50 203.4 155 67.7
Ciclev10030390m.g Citrus clementina HOM05D005166 ORTHO05D006120 1.0e-49 203.0 173 62.4
Potri.009G036900 Populus trichocarpa HOM05D005166 ORTHO05D006120 1.0e-49 203.0 169 64.5
arahy.Tifrunner.gnm1.ann1.SP769B Arachis hypogaea HOM05D005166 ORTHO05D006120 1.3e-49 202.6 192 58.3
THA.LOC104800686 Tarenaya hassleriana HOM05D005166 ORTHO05D006120 2.3e-49 201.8 171 63.2
AUR62001736 Chenopodium quinoa HOM05D005166 ORTHO05D006120 3.0e-49 201.4 155 71.0
ECA247G0723 Erigeron canadensis HOM05D005166 ORTHO05D006120 3.0e-49 201.4 166 63.3
QL01p029224 Quercus lobata HOM05D005166 ORTHO05D006120 3.0e-49 201.4 173 60.1
DCAR_005942 Daucus carota HOM05D005166 ORTHO05D006120 3.9e-49 201.1 147 68.7
Nitab4.5_0001999g0010 Nicotiana tabacum HOM05D005166 ORTHO05D006120 3.9e-49 201.1 164 62.8
TAR636G0020 Trochodendron aralioides HOM05D005166 ORTHO05D006120 3.9e-49 201.1 152 68.4
TAR636G0138 Trochodendron aralioides HOM05D005166 ORTHO05D006120 3.9e-49 201.1 152 68.4
CAN.G3.46 Capsicum annuum HOM05D005166 ORTHO05D006120 6.6e-49 200.3 166 62.0
Solyc09g030390.3 Solanum lycopersicum HOM05D005166 ORTHO05D006120 6.6e-49 200.3 171 60.8
MSTRG.21221 Avicennia marina HOM05D005166 ORTHO05D006120 8.6e-49 199.9 156 64.7
HanXRQChr08g0237471 Helianthus annuus HOM05D005166 ORTHO05D006120 1.1e-48 199.5 166 63.3
Sabra09G0026100 Salix brachista HOM05D005166 ORTHO05D006120 1.1e-48 199.5 164 65.9
Sopen09g013470 Solanum pennellii HOM05D005166 ORTHO05D006120 1.1e-48 199.5 171 60.2
Ah.08g220070 Amaranthus hybridus HOM05D005166 ORTHO05D006120 1.5e-48 199.1 165 64.8
Lsat_1_v5_gn_9_24820 Lactuca sativa HOM05D005166 ORTHO05D006120 1.5e-48 199.1 158 65.2
Prupe.6G070300 Prunus persica HOM05D005166 ORTHO05D006120 1.9e-48 198.7 173 63.0
MD11G1094700 Malus domestica HOM05D005166 ORTHO05D006120 2.5e-48 198.4 158 65.8
Nitab4.5_0005248g0020 Nicotiana tabacum HOM05D005166 ORTHO05D006120 3.3e-48 198.0 169 60.4
AUR62020041 Chenopodium quinoa HOM05D005166 ORTHO05D006120 4.3e-48 197.6 143 73.4
Migut.D00877 Erythranthe guttata HOM05D005166 ORTHO05D006120 7.3e-48 196.8 155 65.2
Sabra16G0148400 Salix brachista HOM05D005166 ORTHO05D006120 7.3e-48 196.8 151 68.9
Haze_24170 Corylus avellana HOM05D005166 ORTHO05D006120 9.5e-48 196.4 148 67.6
Haze_24175 Corylus avellana HOM05D005166 ORTHO05D006120 9.5e-48 196.4 148 67.6
HanXRQChr01g0001871 Helianthus annuus HOM05D005166 ORTHO05D006120 1.2e-47 196.1 162 63.0
SMO144G0189 Selaginella moellendorffii HOM05D005166 ORTHO05D006120 2.1e-47 195.3 142 69.7
MD03G1086100 Malus domestica HOM05D005166 ORTHO05D006120 3.6e-47 194.5 158 64.6
RcHm_v2.0_Chr5g0066361 Rosa chinensis HOM05D005166 ORTHO05D006120 4.7e-47 194.1 174 62.1
Aa31LG5G7110 Aethionema arabicum HOM05D005166 ORTHO05D006120 6.2e-47 193.7 171 62.6
AT2G29210 Arabidopsis thaliana HOM05D005166 ORTHO05D006120 6.2e-47 193.7 171 62.6
AL4G23770 Arabidopsis lyrata HOM05D005166 ORTHO05D006120 1.1e-46 193.0 175 61.7
Mapoly0063s0002 Marchantia polymorpha HOM05D005166 ORTHO05D006120 1.1e-46 193.0 139 69.8
FAN21G1054 Fragaria x ananassa HOM05D005166 ORTHO05D006120 3.1e-46 191.4 174 61.5
FvH4_3g36942 Fragaria vesca HOM05D005166 ORTHO05D006120 4.0e-46 191.0 174 61.5
FAN11G2353 Fragaria x ananassa HOM05D005166 ORTHO05D006120 4.0e-46 191.0 174 61.5
FAN16G3680 Fragaria x ananassa HOM05D005166 ORTHO05D006120 4.0e-46 191.0 174 61.5
FAN25G3327 Fragaria x ananassa HOM05D005166 ORTHO05D006120 4.0e-46 191.0 174 61.5
HanXRQChr08g0237371 Helianthus annuus HOM05D005166 ORTHO05D006120 6.8e-46 190.3 179 58.7
Thhalv10016250m.g Eutrema salsugineum HOM05D005166 ORTHO05D006120 8.9e-46 189.9 175 62.3
Sp4g12020 Schrenkiella parvula HOM05D005166 ORTHO05D006120 8.9e-46 189.9 177 61.0
BraA05t20522Z Brassica rapa HOM05D005166 ORTHO05D006120 1.5e-45 189.1 180 58.3
Cpa.g.sc81.97 Carica papaya HOM05D005166 ORTHO05D006120 3.4e-45 188.0 192 57.8
A05p16120 Brassica napus HOM05D005166 ORTHO05D006120 5.8e-45 187.2 180 57.8
C04p21810 Brassica napus HOM05D005166 ORTHO05D006120 7.6e-45 186.8 151 66.2
BolC4t23701H Brassica oleracea HOM05D005166 ORTHO05D006120 7.6e-45 186.8 151 66.2
Carub.0004s1023 Capsella rubella HOM05D005166 ORTHO05D006120 3.8e-44 184.5 173 59.5
BcaB02g10233 Brassica carinata HOM05D005166 ORTHO05D006120 6.4e-44 183.7 173 60.1
SHI05908 Sapria himalayana HOM05D005166 ORTHO05D006120 2.3e-41 175.3 196 50.0
PGR102G2168 Punica granatum HOM05D005166 ORTHO05D006120 4.7e-39 167.5 173 53.8
CDE06G0141 Ceratophyllum demersum HOM05D005166 ORTHO05D006120 3.4e-37 161.4 203 49.8
SHI31247 Sapria himalayana HOM05D005166 ORTHO05D006120 4.4e-37 161.0 166 51.2
Sc12g0001240 Simmondsia chinensis HOM05D005166 ORTHO05D006120 1.3e-36 159.5 136 62.5
Sed0000001 Sechium edule HOM05D005166 ORTHO05D006120 1.5e-32 146.0 127 61.4
unitig_746.g26715 Utricularia gibba HOM05D005166 ORTHO05D006120 5.6e-32 144.1 130 56.9
SHI33547 Sapria himalayana HOM05D005166 ORTHO05D006120 1.9e-27 129.0 147 49.0
BcaB05g22029 Brassica carinata HOM05D005166 ORTHO05D006120 1.1e-24 119.8 132 53.8
SHI32778 Sapria himalayana HOM05D005166 ORTHO05D006120 9.6e-24 116.7 134 49.3
Cre16.g678050 Chlamydomonas reinhardtii HOM05D005166 ORTHO05D006120 1.8e-22 112.5 182 42.3
SHI25075 Sapria himalayana HOM05D005166 ORTHO05D006120 2.6e-21 108.6 134 45.5
SHI07724 Sapria himalayana HOM05D005166 ORTHO05D006120 3.4e-21 108.2 175 39.4
MCO11G283 Micromonas commoda HOM05D005166 ORTHO05D006120 4.5e-21 107.8 149 43.0
Actinidia33768 Actinidia chinensis HOM05D005166 ORTHO05D006120 2.9e-20 105.1 86 62.8
Zm00001eb397830 Zea mays HOM05D005166 ORTHO05D006120 9.6e-16 90.1 87 57.5
Zm00001eb284680 Zea mays HOM05D005166 ORTHO05D006120 1.4e-14 86.3 90 54.4
Zm00001eb222410 Zea mays HOM05D005166 ORTHO05D006120 1.8e-14 85.9 56 75.0
PRCOL_00003490 Prasinoderma coloniale HOM05D005166 ORTHO05D006120 3.0e-09 68.6 168 32.1
HanXRQChr08g0237461 Helianthus annuus HOM05D005166 ORTHO05D006120 3.9e-09 68.2 50 70.0


User provided reference genes

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