Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50657 Chara braunii HOM05D002474 ORTHO05D006727 6.4e-182 640.6 312 100.0
Pp3c23_2270 Physcomitrium patens HOM05D002474 ORTHO05D006727 1.9e-93 346.7 305 52.8
Duzib168G1861 Durio zibethinus HOM05D002474 ORTHO05D006727 1.3e-86 323.9 299 52.5
Mapoly0035s0063 Marchantia polymorpha HOM05D002474 ORTHO05D006727 1.1e-85 320.9 283 54.8
Atru.chr8.2476 Acer truncatum HOM05D002474 ORTHO05D006727 2.5e-85 319.7 299 52.2
HanXRQChr17g0547501 Helianthus annuus HOM05D002474 ORTHO05D006727 2.5e-85 319.7 302 50.7
Potri.004G130000 Populus trichocarpa HOM05D002474 ORTHO05D006727 2.5e-85 319.7 260 56.9
Aqoxy3G00804 Aquilegia oxysepala HOM05D002474 ORTHO05D006727 5.5e-85 318.5 302 51.3
Thecc.09G254500 Theobroma cacao HOM05D002474 ORTHO05D006727 2.1e-84 316.6 299 50.5
Aa31LG9G1670 Aethionema arabicum HOM05D002474 ORTHO05D006727 4.7e-84 315.5 299 50.5
CDE08G1502 Ceratophyllum demersum HOM05D002474 ORTHO05D006727 8.0e-84 314.7 299 52.2
Eucgr.J02138 Eucalyptus grandis HOM05D002474 ORTHO05D006727 1.0e-83 314.3 299 51.8
Ciclev10011620m.g Citrus clementina HOM05D002474 ORTHO05D006727 1.4e-83 313.9 268 56.0
Gorai.013G255100 Gossypium raimondii HOM05D002474 ORTHO05D006727 1.4e-83 313.9 302 50.7
Nn4g23008 Nelumbo nucifera HOM05D002474 ORTHO05D006727 3.0e-83 312.8 299 52.2
PSO478G4089 Papaver somniferum HOM05D002474 ORTHO05D006727 4.0e-83 312.4 256 56.6
Gohir.A13G220300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 5.2e-83 312.0 302 50.7
ECA246G0556 Erigeron canadensis HOM05D002474 ORTHO05D006727 1.2e-82 310.8 302 49.7
THA.LOC104805441 Tarenaya hassleriana HOM05D002474 ORTHO05D006727 1.2e-82 310.8 299 51.5
Ca_04259_v3 Cicer arietinum L. HOM05D002474 ORTHO05D006727 1.5e-82 310.5 275 53.8
Phvul.004G025500 Phaseolus vulgaris HOM05D002474 ORTHO05D006727 1.5e-82 310.5 256 56.6
AL7G50200 Arabidopsis lyrata HOM05D002474 ORTHO05D006727 4.4e-82 308.9 302 49.0
Psat1g077640 Pisum sativum HOM05D002474 ORTHO05D006727 4.4e-82 308.9 297 50.2
Sc11g0006920 Simmondsia chinensis HOM05D002474 ORTHO05D006727 4.4e-82 308.9 259 56.8
TPR.G4252 Trifolium pratense HOM05D002474 ORTHO05D006727 4.4e-82 308.9 297 50.5
Medtr6g011270 Medicago truncatula HOM05D002474 ORTHO05D006727 5.7e-82 308.5 253 56.5
PSO161G0033 Papaver somniferum HOM05D002474 ORTHO05D006727 7.5e-82 308.1 256 55.9
GSVIVG01032597001 Vitis vinifera HOM05D002474 ORTHO05D006727 9.8e-82 307.8 299 51.2
PGR083G0251 Punica granatum HOM05D002474 ORTHO05D006727 1.7e-81 307.0 256 57.8
FvH4_6g49390 Fragaria vesca HOM05D002474 ORTHO05D006727 3.7e-81 305.8 310 49.0
CSS0021046 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.1e-80 304.3 263 56.7
CSS0037906 Camellia sinensis var. sinensis HOM05D002474 ORTHO05D006727 1.1e-80 304.3 263 56.7
Carub.0007s3579 Capsella rubella HOM05D002474 ORTHO05D006727 1.1e-80 304.3 302 49.0
Lalb_Chr06g0175531 Lupinus albus HOM05D002474 ORTHO05D006727 1.1e-80 304.3 254 56.3
Os12g0638800 Oryza sativa ssp. japonica HOM05D002474 ORTHO05D006727 1.1e-80 304.3 254 55.9
QL02p080225 Quercus lobata HOM05D002474 ORTHO05D006727 1.1e-80 304.3 309 48.9
PGSC0003DMG400006940 Solanum tuberosum HOM05D002474 ORTHO05D006727 1.1e-80 304.3 297 50.8
Solyc02g067480.3 Solanum lycopersicum HOM05D002474 ORTHO05D006727 1.4e-80 303.9 297 50.8
CAN.G1128.5 Capsicum annuum HOM05D002474 ORTHO05D006727 1.8e-80 303.5 297 50.8
CARHR262240 Cardamine hirsuta HOM05D002474 ORTHO05D006727 1.8e-80 303.5 299 49.5
CiPaw.04G020500 Carya illinoinensis HOM05D002474 ORTHO05D006727 1.8e-80 303.5 260 55.8
Sopen02g016630 Solanum pennellii HOM05D002474 ORTHO05D006727 1.8e-80 303.5 297 50.8
BraA04t16928Z Brassica rapa HOM05D002474 ORTHO05D006727 2.4e-80 303.1 299 49.5
Lsat_1_v5_gn_3_102300 Lactuca sativa HOM05D002474 ORTHO05D006727 2.4e-80 303.1 299 49.8
CsaV3_5G037800 Cucumis sativus L. HOM05D002474 ORTHO05D006727 3.1e-80 302.8 266 54.5
Dinv33713 Davidia involucrata HOM05D002474 ORTHO05D006727 3.1e-80 302.8 297 50.8
Lj2g0026556 Lotus japonicus HOM05D002474 ORTHO05D006727 3.1e-80 302.8 254 55.9
AagrBONN_evm.TU.Sc2ySwM_369.199 Anthoceros agrestis HOM05D002474 ORTHO05D006727 5.4e-80 302.0 260 52.7
Hma1.2p1_0449F.1_g154950 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 5.4e-80 302.0 260 54.6
RcHm_v2.0_Chr2g0169251 Rosa chinensis HOM05D002474 ORTHO05D006727 1.2e-79 300.8 311 49.2
MELO3C021965.2 Cucumis melo HOM05D002474 ORTHO05D006727 1.6e-79 300.4 266 53.8
Nitab4.5_0006062g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.3e-78 297.4 294 50.3
arahy.Tifrunner.gnm1.ann1.B2F8E8 Arachis hypogaea HOM05D002474 ORTHO05D006727 1.7e-78 297.0 274 52.9
Zm00001eb033100 Zea mays HOM05D002474 ORTHO05D006727 3.8e-78 295.8 329 44.1
ATR0609G116 Amborella trichopoda HOM05D002474 ORTHO05D006727 1.5e-77 293.9 299 48.2
EL10Ac2g02929 Beta vulgaris HOM05D002474 ORTHO05D006727 1.5e-77 293.9 297 48.1
Migut.K01338 Erythranthe guttata HOM05D002474 ORTHO05D006727 1.9e-77 293.5 308 47.7
AT5G39940 Arabidopsis thaliana HOM05D002474 ORTHO05D006727 3.3e-77 292.7 299 48.5
Ah.12g065360 Amaranthus hybridus HOM05D002474 ORTHO05D006727 1.2e-76 290.8 297 47.8
Nitab4.5_0002699g0040 Nicotiana tabacum HOM05D002474 ORTHO05D006727 1.2e-76 290.8 293 49.5
Gohir.D13G224300 Gossypium hirsutum HOM05D002474 ORTHO05D006727 2.8e-76 289.7 311 47.9
HanXRQChr16g0519921 Helianthus annuus HOM05D002474 ORTHO05D006727 2.8e-76 289.7 291 49.1
unitig_748.g8621 Utricularia gibba HOM05D002474 ORTHO05D006727 3.6e-76 289.3 302 46.7
COL.COLO4_24935 Corchorus olitorius HOM05D002474 ORTHO05D006727 3.0e-75 286.2 277 50.9
Oeu033341.3 Olea europaea HOM05D002474 ORTHO05D006727 5.2e-75 285.4 254 54.7
RhsimUnG0054500 Rhododendron simsii HOM05D002474 ORTHO05D006727 3.4e-74 282.7 330 45.8
Thhalv10028129m.g Eutrema salsugineum HOM05D002474 ORTHO05D006727 5.7e-74 282.0 299 48.2
SMO137G0254 Selaginella moellendorffii HOM05D002474 ORTHO05D006727 4.9e-73 278.9 293 47.8
SGA_v2.0_scaffold224G42953 Striga asiatica HOM05D002474 ORTHO05D006727 4.9e-73 278.9 301 48.2
Hund13252 Selenicereus undatus HOM05D002474 ORTHO05D006727 3.2e-72 276.2 375 41.1
AUR62031654 Chenopodium quinoa HOM05D002474 ORTHO05D006727 2.7e-71 273.1 302 46.4
Nitab4.5_0023901g0010 Nicotiana tabacum HOM05D002474 ORTHO05D006727 3.5e-71 272.7 281 48.8
Haze_14590 Corylus avellana HOM05D002474 ORTHO05D006727 1.3e-70 270.8 266 50.8
TAR629G1594 Trochodendron aralioides HOM05D002474 ORTHO05D006727 2.3e-70 270.0 272 50.0
BcaB06g27397 Brassica carinata HOM05D002474 ORTHO05D006727 3.9e-70 269.2 291 47.1
TWI60G0106 Tripterygium wilfordii HOM05D002474 ORTHO05D006727 3.3e-69 266.2 259 52.5
Rhsim10G0032000 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.6e-68 263.8 312 45.2
Sabra04G0087600 Salix brachista HOM05D002474 ORTHO05D006727 1.6e-68 263.8 328 44.8
FAN02G0112 Fragaria x ananassa HOM05D002474 ORTHO05D006727 2.8e-68 263.1 310 45.2
Cpa.g.sc14.49 Carica papaya HOM05D002474 ORTHO05D006727 2.3e-67 260.0 261 50.2
AUR62018296 Chenopodium quinoa HOM05D002474 ORTHO05D006727 4.0e-67 259.2 302 44.7
arahy.Tifrunner.gnm1.ann1.DRNA5E Arachis hypogaea HOM05D002474 ORTHO05D006727 6.8e-67 258.5 274 48.2
Peaxi162Scf00059g00319 Petunia axillaris HOM05D002474 ORTHO05D006727 4.9e-65 252.3 284 45.4
Cfa007503 Carpinus fangiana HOM05D002474 ORTHO05D006727 6.4e-65 251.9 298 45.0
FAN14G2185 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.4e-64 250.8 342 41.2
VMungo0464G0136 Vigna mungo HOM05D002474 ORTHO05D006727 2.3e-62 243.4 313 42.8
Glyma.19G019000 Glycine max HOM05D002474 ORTHO05D006727 1.9e-61 240.4 254 47.6
CANSAT64G2711 Cannabis sativa HOM05D002474 ORTHO05D006727 3.6e-60 236.1 212 51.9
Sed0010242 Sechium edule HOM05D002474 ORTHO05D006727 1.8e-59 233.8 252 46.0
A04p12710 Brassica napus HOM05D002474 ORTHO05D006727 3.4e-58 229.6 261 44.1
SalBow1G0883 Salvia bowleyana HOM05D002474 ORTHO05D006727 4.4e-58 229.2 267 46.1
C04p46420 Brassica napus HOM05D002474 ORTHO05D006727 1.3e-57 227.6 261 43.7
HPP92_014139 Vanilla planifolia HOM05D002474 ORTHO05D006727 8.3e-57 224.9 209 49.8
FAN05G2709 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.9e-56 223.8 312 41.0
Cc07_g02930 Coffea canephora HOM05D002474 ORTHO05D006727 4.6e-55 219.2 193 55.4
ClCG09G018440 Citrullus lanatus HOM05D002474 ORTHO05D006727 6.6e-54 215.3 405 33.6
QL02p080121 Quercus lobata HOM05D002474 ORTHO05D006727 8.6e-54 214.9 192 52.6
FAN09G4837 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.9e-53 213.8 343 37.9
DCAR_011168 Daucus carota HOM05D002474 ORTHO05D006727 2.0e-50 203.8 194 50.0
vmacro05750 Vaccinium macrocarpon HOM05D002474 ORTHO05D006727 8.9e-43 178.3 263 38.0
Prupe.3G272800 Prunus persica HOM05D002474 ORTHO05D006727 1.3e-41 174.5 203 44.3
Lj7A402G46 Lonicera japonica HOM05D002474 ORTHO05D006727 7.6e-34 148.7 257 34.6
SEGI_13584 Sequoiadendron giganteum HOM05D002474 ORTHO05D006727 6.7e-30 135.6 152 47.4
Manes.S095220 Manihot esculenta HOM05D002474 ORTHO05D006727 1.1e-27 128.3 136 47.8
Hma1.2p1_0449F.1_g154940 Hydrangea macrophylla HOM05D002474 ORTHO05D006727 2.9e-25 120.2 111 49.5
MCO07G529 Micromonas commoda HOM05D002474 ORTHO05D006727 1.9e-24 117.5 331 30.2
C09p60950 Brassica napus HOM05D002474 ORTHO05D006727 1.9e-21 107.5 110 46.4
BolC9t56457H Brassica oleracea HOM05D002474 ORTHO05D006727 1.3e-17 94.7 104 44.2
Lsat_1_v5_gn_2_107941 Lactuca sativa HOM05D002474 ORTHO05D005260 2.9e-17 93.6 207 29.0
Cre09.g389400 Chlamydomonas reinhardtii HOM05D002474 ORTHO05D006727 4.2e-16 89.7 301 25.2
Cc07_g02920 Coffea canephora HOM05D002474 ORTHO05D006727 4.6e-15 86.3 112 44.6
C09p36190 Brassica napus HOM05D002474 ORTHO05D006727 1.5e-13 81.3 97 41.2
Lsat_1_v5_gn_6_77521 Lactuca sativa HOM05D002474 ORTHO05D006727 5.7e-13 79.3 178 28.1
QL02p080117 Quercus lobata HOM05D002474 ORTHO05D006727 3.7e-12 76.6 93 43.0
FAN10G3970 Fragaria x ananassa HOM05D002474 ORTHO05D006727 6.3e-12 75.9 54 61.1
FAN10G3068 Fragaria x ananassa HOM05D002474 ORTHO05D006727 1.5e-10 71.2 48 62.5
Rhsim10G0031600 Rhododendron simsii HOM05D002474 ORTHO05D006727 1.5e-10 71.2 90 41.1
PRCOL_00006911 Prasinoderma coloniale HOM05D002474 ORTHO05D006727 6.5e-09 65.9 76 39.5
HanXRQChr09g0265421 Helianthus annuus HOM05D002474 ORTHO05D006727 1.6e-07 61.2 86 38.4
BcaC04g18910 Brassica carinata HOM05D002474 ORTHO05D006727 2.1e-07 60.8 109 33.0
MBI04_g20673_MAGBIO Magnolia biondii HOM05D002474 ORTHO05D006727 2.1e-07 60.8 68 36.8


User provided reference genes

Program Settings