Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50375 Chara braunii HOM05D005139 ORTHO05D006125 4.3e-92 341.3 169 100.0
Pp3c16_8790 Physcomitrium patens HOM05D005139 ORTHO05D006125 1.3e-59 233.4 163 68.7
Mapoly0145s0019 Marchantia polymorpha HOM05D005139 ORTHO05D006125 1.0e-56 223.8 166 65.1
Ciclev10019589m.g Citrus clementina HOM05D005139 ORTHO05D006125 2.0e-52 209.5 163 62.0
Sed0024992 Sechium edule HOM05D005139 ORTHO05D006125 5.7e-52 208.0 163 62.0
Ciclev10023690m.g Citrus clementina HOM05D005139 ORTHO05D006125 7.5e-52 207.6 163 60.7
ClCG04G002160 Citrullus lanatus HOM05D005139 ORTHO05D006125 1.3e-51 206.8 163 61.3
MELO3C008916.2 Cucumis melo HOM05D005139 ORTHO05D006125 1.3e-51 206.8 163 61.3
CsaV3_4G030530 Cucumis sativus L. HOM05D005139 ORTHO05D006125 1.3e-51 206.8 163 61.3
TWI38G1771 Tripterygium wilfordii HOM05D005139 ORTHO05D006125 1.7e-51 206.5 163 60.1
Actinidia12584 Actinidia chinensis HOM05D005139 ORTHO05D006125 2.8e-51 205.7 163 59.5
SalBow7G0115 Salvia bowleyana HOM05D005139 ORTHO05D006125 2.8e-51 205.7 163 60.1
SalBow7G2844 Salvia bowleyana HOM05D005139 ORTHO05D006125 2.8e-51 205.7 163 60.1
Solyc12g014320.2 Solanum lycopersicum HOM05D005139 ORTHO05D006125 2.8e-51 205.7 164 61.6
Nitab4.5_0000035g0250 Nicotiana tabacum HOM05D005139 ORTHO05D006125 3.7e-51 205.3 163 60.1
Nitab4.5_0007851g0020 Nicotiana tabacum HOM05D005139 ORTHO05D006125 3.7e-51 205.3 163 60.1
Peaxi162Scf00000g06812 Petunia axillaris HOM05D005139 ORTHO05D006125 3.7e-51 205.3 163 60.1
Sopen12g006100 Solanum pennellii HOM05D005139 ORTHO05D006125 3.7e-51 205.3 163 60.1
Atru.chr2.2128 Acer truncatum HOM05D005139 ORTHO05D006125 4.8e-51 204.9 163 59.5
Migut.H02003 Erythranthe guttata HOM05D005139 ORTHO05D006125 6.3e-51 204.5 163 60.1
SGA_v2.0_scaffold130G34288 Striga asiatica HOM05D005139 ORTHO05D006125 6.3e-51 204.5 163 59.5
Cc05_g10990 Coffea canephora HOM05D005139 ORTHO05D006125 8.3e-51 204.1 163 60.7
Manes.15G095700 Manihot esculenta HOM05D005139 ORTHO05D006125 8.3e-51 204.1 163 60.1
GSVIVG01014182001 Vitis vinifera HOM05D005139 ORTHO05D006125 8.3e-51 204.1 163 61.3
Dinv18369 Davidia involucrata HOM05D005139 ORTHO05D006125 1.1e-50 203.8 163 60.7
PSO063G5899 Papaver somniferum HOM05D005139 ORTHO05D006125 1.1e-50 203.8 163 60.1
CAN.G443.5 Capsicum annuum HOM05D005139 ORTHO05D006125 1.4e-50 203.4 163 59.5
Glyma.06G228700 Glycine max HOM05D005139 ORTHO05D006125 1.8e-50 203.0 163 58.9
Duzib213G0634 Durio zibethinus HOM05D005139 ORTHO05D006125 2.4e-50 202.6 163 59.5
Aqoxy4G00276 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 3.1e-50 202.2 163 58.3
Glyma.12G156300 Glycine max HOM05D005139 ORTHO05D006125 3.1e-50 202.2 163 58.9
THA.LOC104812316 Tarenaya hassleriana HOM05D005139 ORTHO05D006125 3.1e-50 202.2 165 58.2
BcaB03g16034 Brassica carinata HOM05D005139 ORTHO05D006125 4.1e-50 201.8 165 57.6
Lj3g0013017 Lotus japonicus HOM05D005139 ORTHO05D006125 4.1e-50 201.8 164 59.8
Oeu005379.1 Olea europaea HOM05D005139 ORTHO05D006125 4.1e-50 201.8 163 60.1
PSO782G2705 Papaver somniferum HOM05D005139 ORTHO05D006125 4.1e-50 201.8 163 59.5
Sp5g33790 Schrenkiella parvula HOM05D005139 ORTHO05D006125 4.1e-50 201.8 165 57.6
Thhalv10018370m.g Eutrema salsugineum HOM05D005139 ORTHO05D006125 5.3e-50 201.4 165 57.6
Sabra11G0096100 Salix brachista HOM05D005139 ORTHO05D006125 5.3e-50 201.4 164 59.8
AL2G39160 Arabidopsis lyrata HOM05D005139 ORTHO05D006125 7.0e-50 201.1 165 58.2
Potri.011G108800 Populus trichocarpa HOM05D005139 ORTHO05D006125 7.0e-50 201.1 163 60.1
Aa31LG4G2260 Aethionema arabicum HOM05D005139 ORTHO05D006125 9.1e-50 200.7 165 57.6
Aqoxy3G02037 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 9.1e-50 200.7 163 58.3
A07p43980 Brassica napus HOM05D005139 ORTHO05D006125 1.2e-49 200.3 165 57.0
BraA07t31905Z Brassica rapa HOM05D005139 ORTHO05D006125 1.2e-49 200.3 165 57.0
Phvul.011G165500 Phaseolus vulgaris HOM05D005139 ORTHO05D006125 1.2e-49 200.3 163 58.3
Psat4g140160 Pisum sativum HOM05D005139 ORTHO05D006125 1.6e-49 199.9 163 57.7
Hund10469 Selenicereus undatus HOM05D005139 ORTHO05D006125 1.6e-49 199.9 163 59.5
VMungo1127G1423 Vigna mungo HOM05D005139 ORTHO05D006125 1.6e-49 199.9 163 58.3
CANSAT35G0508 Cannabis sativa HOM05D005139 ORTHO05D006125 2.0e-49 199.5 163 58.3
Carub.0002s2560 Capsella rubella HOM05D005139 ORTHO05D006125 2.0e-49 199.5 165 57.6
CARHR072310 Cardamine hirsuta HOM05D005139 ORTHO05D006125 2.0e-49 199.5 165 57.6
DCAR_013162 Daucus carota HOM05D005139 ORTHO05D006125 2.0e-49 199.5 163 58.9
Eucgr.F01248 Eucalyptus grandis HOM05D005139 ORTHO05D006125 2.0e-49 199.5 163 59.5
ATR0127G028 Amborella trichopoda HOM05D005139 ORTHO05D006125 2.7e-49 199.1 163 59.5
CSS0042561 Camellia sinensis var. sinensis HOM05D005139 ORTHO05D006125 2.7e-49 199.1 163 58.3
Thecc.07G118200 Theobroma cacao HOM05D005139 ORTHO05D006125 2.7e-49 199.1 163 59.5
TAR626G0095 Trochodendron aralioides HOM05D005139 ORTHO05D006125 2.7e-49 199.1 163 59.5
AT1G78770 Arabidopsis thaliana HOM05D005139 ORTHO05D006125 3.5e-49 198.7 165 57.0
COL.COLO4_17530 Corchorus olitorius HOM05D005139 ORTHO05D006125 3.5e-49 198.7 163 58.9
Gohir.D01G042704 Gossypium hirsutum HOM05D005139 ORTHO05D006125 3.5e-49 198.7 163 58.3
Gorai.002G053800 Gossypium raimondii HOM05D005139 ORTHO05D006125 3.5e-49 198.7 163 58.3
PGR083G0616 Punica granatum HOM05D005139 ORTHO05D006125 3.5e-49 198.7 165 58.8
Potri.001G389300 Populus trichocarpa HOM05D005139 ORTHO05D006125 4.5e-49 198.4 163 59.5
MD11G1264600 Malus domestica HOM05D005139 ORTHO05D006125 5.9e-49 198.0 163 57.7
EL10Ac4g08361 Beta vulgaris HOM05D005139 ORTHO05D006125 7.7e-49 197.6 163 59.5
AUR62037557 Chenopodium quinoa HOM05D005139 ORTHO05D006125 7.7e-49 197.6 163 59.5
BcaC08g47457 Brassica carinata HOM05D005139 ORTHO05D006125 1.0e-48 197.2 165 56.4
C06p52650 Brassica napus HOM05D005139 ORTHO05D006125 1.0e-48 197.2 165 56.4
Gohir.A01G053400 Gossypium hirsutum HOM05D005139 ORTHO05D006125 1.7e-48 196.4 163 57.7
arahy.Tifrunner.gnm1.ann1.405FF9 Arachis hypogaea HOM05D005139 ORTHO05D006125 2.9e-48 195.7 164 56.7
Lsat_1_v5_gn_7_102480 Lactuca sativa HOM05D005139 ORTHO05D006125 2.9e-48 195.7 163 57.7
RcHm_v2.0_Chr5g0030761 Rosa chinensis HOM05D005139 ORTHO05D006125 2.9e-48 195.7 162 58.0
Dinv15003 Davidia involucrata HOM05D005139 ORTHO05D006125 3.8e-48 195.3 163 58.9
CiPaw.11G159600 Carya illinoinensis HOM05D005139 ORTHO05D006125 5.0e-48 194.9 163 57.1
FvH4_3g18210 Fragaria vesca HOM05D005139 ORTHO05D006125 5.0e-48 194.9 162 58.0
FAN16G0871 Fragaria x ananassa HOM05D005139 ORTHO05D006125 5.0e-48 194.9 162 58.0
FAN21G0160 Fragaria x ananassa HOM05D005139 ORTHO05D006125 5.0e-48 194.9 162 58.0
HanXRQChr11g0331031 Helianthus annuus HOM05D005139 ORTHO05D006125 5.0e-48 194.9 163 56.4
Lalb_Chr03g0031181 Lupinus albus HOM05D005139 ORTHO05D006125 6.5e-48 194.5 163 57.1
arahy.Tifrunner.gnm1.ann1.J0RB3X Arachis hypogaea HOM05D005139 ORTHO05D006125 8.5e-48 194.1 163 56.4
ECA236G1068 Erigeron canadensis HOM05D005139 ORTHO05D006125 1.1e-47 193.7 163 56.4
Prupe.4G161700 Prunus persica HOM05D005139 ORTHO05D006125 1.1e-47 193.7 163 57.1
FAN25G1917 Fragaria x ananassa HOM05D005139 ORTHO05D006125 1.5e-47 193.4 162 57.4
TPR.G5772 Trifolium pratense HOM05D005139 ORTHO05D006125 1.5e-47 193.4 163 57.7
Cfa019555 Carpinus fangiana HOM05D005139 ORTHO05D006125 1.9e-47 193.0 163 55.8
MBI06_g15765_MAGBIO Magnolia biondii HOM05D005139 ORTHO05D006125 3.2e-47 192.2 160 57.5
FAN11G0516 Fragaria x ananassa HOM05D005139 ORTHO05D006125 4.2e-47 191.8 162 57.4
HanXRQChr15g0495211 Helianthus annuus HOM05D005139 ORTHO05D006125 1.2e-46 190.3 163 55.8
SHI27616 Sapria himalayana HOM05D005139 ORTHO05D006125 1.2e-46 190.3 162 58.0
Ah.04g164210 Amaranthus hybridus HOM05D005139 ORTHO05D006125 2.7e-46 189.1 163 55.2
Lj8A148G34 Lonicera japonica HOM05D005139 ORTHO05D006125 3.6e-46 188.7 185 51.9
Sc03g0010570 Simmondsia chinensis HOM05D005139 ORTHO05D006125 3.6e-46 188.7 163 56.4
Os03g0236966 Oryza sativa ssp. japonica HOM05D005139 ORTHO05D006125 6.8e-45 184.5 163 57.1
Medtr8g058380 Medicago truncatula HOM05D005139 ORTHO05D006125 3.4e-44 182.2 164 56.1
SMO244G0086 Selaginella moellendorffii HOM05D005139 ORTHO05D006125 3.4e-44 182.2 161 60.9
Zm00001eb399210 Zea mays HOM05D005139 ORTHO05D006125 1.3e-43 180.3 163 56.4
QL08p026113 Quercus lobata HOM05D005139 ORTHO05D006125 1.2e-41 173.7 163 51.5
HPP92_004206 Vanilla planifolia HOM05D005139 ORTHO05D006125 6.6e-40 167.9 150 55.3
unitig_26.g9517 Utricularia gibba HOM05D005139 ORTHO05D006125 1.1e-39 167.2 150 54.7
AUR62019588 Chenopodium quinoa HOM05D005139 ORTHO05D006125 5.5e-39 164.9 163 52.8
Ca_28352_v3 Cicer arietinum L. HOM05D005139 ORTHO05D006125 7.2e-39 164.5 152 53.3
vmacro11947 Vaccinium macrocarpon HOM05D005139 ORTHO05D006125 2.8e-38 162.5 245 40.0
Cre13.g562950 Chlamydomonas reinhardtii HOM05D005139 ORTHO05D006125 3.0e-37 159.1 161 49.7
Haze_09316 Corylus avellana HOM05D005139 ORTHO05D006125 4.0e-37 158.7 230 39.6
MD00G1077100 Malus domestica HOM05D005139 ORTHO05D006125 4.9e-35 151.8 182 44.0
BolC6t40284H Brassica oleracea HOM05D005139 ORTHO05D006125 1.4e-34 150.2 139 51.8
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 7.8e-33 144.4 133 57.1
Cpa.g.sc77.24 Carica papaya HOM05D005139 ORTHO05D006125 1.1e-31 140.6 127 53.5
PRCOL_00005307 Prasinoderma coloniale HOM05D005139 ORTHO05D006125 3.1e-29 132.5 198 41.9
AagrBONN_evm.TU.Sc2ySwM_368.2003 Anthoceros agrestis HOM05D005139 ORTHO05D006125 4.4e-28 128.6 130 54.6
Ciclev10023736m.g Citrus clementina HOM05D005139 ORTHO05D006125 1.3e-27 127.1 150 46.0
Ciclev10023923m.g Citrus clementina HOM05D005139 ORTHO05D006125 1.3e-27 127.1 150 46.7
Aqoxy256s002 Aquilegia oxysepala HOM05D005139 ORTHO05D006125 1.7e-27 126.7 109 56.0
MCO01G684 Micromonas commoda HOM05D005139 ORTHO05D006125 9.2e-26 120.9 224 37.1
Prupe.4G162300 Prunus persica HOM05D005139 ORTHO05D006125 8.3e-19 97.8 85 54.1
MD03G1275800 Malus domestica HOM05D005139 ORTHO05D006125 1.9e-18 96.7 78 57.7
C03p92750 Brassica napus HOM05D005139 ORTHO05D006125 5.6e-15 85.1 76 53.9
MD03G1275700 Malus domestica HOM05D005139 ORTHO05D006125 3.4e-12 75.9 49 67.3


User provided reference genes

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