Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50344 Chara braunii HOM05D005878 ORTHO05D007433 6.6e-164 580.9 342 100.0
Rhsim10G0180100 Rhododendron simsii HOM05D005878 ORTHO05D007433 3.3e-22 110.2 167 40.7
Mapoly0116s0014 Marchantia polymorpha HOM05D005878 ORTHO05D007433 9.5e-22 108.6 211 41.2
VMungo1080G0593 Vigna mungo HOM05D005878 ORTHO05D007433 1.2e-21 108.2 145 45.5
Ca_14245_v3 Cicer arietinum L. HOM05D005878 ORTHO05D007433 4.7e-21 106.3 142 45.1
TWI38G1150 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 4.7e-21 106.3 134 45.5
AagrBONN_evm.TU.Sc2ySwM_117.1283 Anthoceros agrestis HOM05D005878 ORTHO05D007433 6.2e-21 105.9 131 44.3
Glyma.04G132400 Glycine max HOM05D005878 ORTHO05D007433 6.2e-21 105.9 136 47.1
SEGI_13955 Sequoiadendron giganteum HOM05D005878 ORTHO05D007433 8.1e-21 105.5 138 47.8
Manes.11G008200 Manihot esculenta HOM05D005878 ORTHO05D007433 1.4e-20 104.8 136 45.6
EL10Ac2g02748 Beta vulgaris HOM05D005878 ORTHO05D007433 1.8e-20 104.4 170 39.4
Lalb_Chr01g0007451 Lupinus albus HOM05D005878 ORTHO05D007433 1.8e-20 104.4 194 39.7
AagrBONN_evm.TU.Sc2ySwM_117.450 Anthoceros agrestis HOM05D005878 ORTHO05D007433 2.4e-20 104.0 167 39.5
ECA248G2695 Erigeron canadensis HOM05D005878 ORTHO05D007433 2.4e-20 104.0 209 39.7
Lj3g0011478 Lotus japonicus HOM05D005878 ORTHO05D007433 2.4e-20 104.0 233 36.1
Medtr3g013460 Medicago truncatula HOM05D005878 ORTHO05D007433 2.4e-20 104.0 143 44.8
Ciclev10002378m.g Citrus clementina HOM05D005878 ORTHO05D007433 3.1e-20 103.6 115 47.8
Glyma.06G309000 Glycine max HOM05D005878 ORTHO05D007433 3.1e-20 103.6 140 45.7
TWI15G0528 Tripterygium wilfordii HOM05D005878 ORTHO05D007433 3.1e-20 103.6 137 46.7
Aqoxy2G00498 Aquilegia oxysepala HOM05D005878 ORTHO05D007433 5.2e-20 102.8 135 44.4
Sopen01g040380 Solanum pennellii HOM05D005878 ORTHO05D007433 5.2e-20 102.8 217 39.2
CANSAT01G2833 Cannabis sativa HOM05D005878 ORTHO05D007433 8.9e-20 102.1 191 37.7
PSO339G1146 Papaver somniferum HOM05D005878 ORTHO05D007433 1.5e-19 101.3 170 38.2
Cfa010961 Carpinus fangiana HOM05D005878 ORTHO05D007433 2.0e-19 100.9 135 46.7
Lsat_1_v5_gn_9_74980 Lactuca sativa HOM05D005878 ORTHO05D007433 2.0e-19 100.9 134 44.0
CSS0046372 Camellia sinensis var. sinensis HOM05D005878 ORTHO05D007433 5.8e-19 99.4 133 47.4
CDE08G0208 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 5.8e-19 99.4 92 55.4
Gohir.A05G398900 Gossypium hirsutum HOM05D005878 ORTHO05D007433 5.8e-19 99.4 209 37.8
HanXRQChr11g0341301 Helianthus annuus HOM05D005878 ORTHO05D007433 5.8e-19 99.4 196 37.8
Peaxi162Scf00220g00235 Petunia axillaris HOM05D005878 ORTHO05D007433 5.8e-19 99.4 139 44.6
PGSC0003DMG400003288 Solanum tuberosum HOM05D005878 ORTHO05D007433 5.8e-19 99.4 212 37.7
MSTRG.16973 Avicennia marina HOM05D005878 ORTHO05D007433 7.6e-19 99.0 137 42.3
Os02g0556800 Oryza sativa ssp. japonica HOM05D005878 ORTHO05D007433 7.6e-19 99.0 211 37.9
Phvul.005G018300 Phaseolus vulgaris HOM05D005878 ORTHO05D007433 7.6e-19 99.0 214 37.4
Prupe.2G044200 Prunus persica HOM05D005878 ORTHO05D007433 7.6e-19 99.0 135 45.9
CDE02G0435 Ceratophyllum demersum HOM05D005878 ORTHO05D007433 9.9e-19 98.6 92 55.4
Gorai.012G019700 Gossypium raimondii HOM05D005878 ORTHO05D007433 9.9e-19 98.6 209 37.8
PSO384G4469 Papaver somniferum HOM05D005878 ORTHO05D007433 9.9e-19 98.6 170 37.6
Solyc01g096660.3 Solanum lycopersicum HOM05D005878 ORTHO05D007433 9.9e-19 98.6 217 37.8
Gohir.D04G017000 Gossypium hirsutum HOM05D005878 ORTHO05D007433 1.3e-18 98.2 209 37.8
Thecc.10G140600 Theobroma cacao HOM05D005878 ORTHO05D007433 1.3e-18 98.2 198 37.4
CiPaw.14G010200 Carya illinoinensis HOM05D005878 ORTHO05D007433 1.7e-18 97.8 150 42.7
AUR62032609 Chenopodium quinoa HOM05D005878 ORTHO05D007433 1.7e-18 97.8 136 43.4
SalBow2G0433 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.7e-18 97.8 203 37.9
SalBow2G2419 Salvia bowleyana HOM05D005878 ORTHO05D007433 1.7e-18 97.8 203 37.9
Dinv32002 Davidia involucrata HOM05D005878 ORTHO05D007433 2.9e-18 97.1 116 47.4
RcHm_v2.0_Chr1g0327631 Rosa chinensis HOM05D005878 ORTHO05D007433 2.9e-18 97.1 135 44.4
TAR636G2836 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.9e-18 97.1 143 42.7
ATR1136G020 Amborella trichopoda HOM05D005878 ORTHO05D007433 4.9e-18 96.3 133 43.6
ClCG05G027000 Citrullus lanatus HOM05D005878 ORTHO05D007433 4.9e-18 96.3 186 37.1
Pp3c8_5370 Physcomitrium patens HOM05D005878 ORTHO05D007433 4.9e-18 96.3 205 36.6
GSVIVG01036595001 Vitis vinifera HOM05D005878 ORTHO05D007433 4.9e-18 96.3 173 36.4
Actinidia01520 Actinidia chinensis HOM05D005878 ORTHO05D007433 6.4e-18 95.9 210 35.2
BcaB05g21635 Brassica carinata HOM05D005878 ORTHO05D007433 6.4e-18 95.9 116 44.8
BcaC03g13174 Brassica carinata HOM05D005878 ORTHO05D007433 6.4e-18 95.9 116 44.8
C02p02970 Brassica napus HOM05D005878 ORTHO05D007433 6.4e-18 95.9 116 44.8
BolC2t06258H Brassica oleracea HOM05D005878 ORTHO05D007433 6.4e-18 95.9 116 44.8
Migut.B01182 Erythranthe guttata HOM05D005878 ORTHO05D007433 6.4e-18 95.9 207 36.7
Nitab4.5_0004168g0090 Nicotiana tabacum HOM05D005878 ORTHO05D007433 6.4e-18 95.9 219 36.1
Pp3c3_32790 Physcomitrium patens HOM05D005878 ORTHO05D007433 6.4e-18 95.9 209 32.1
Sed0004070 Sechium edule HOM05D005878 ORTHO05D007433 6.4e-18 95.9 198 36.4
COL.COLO4_05616 Corchorus olitorius HOM05D005878 ORTHO05D007433 8.4e-18 95.5 206 38.3
CsaV3_5G036960 Cucumis sativus L. HOM05D005878 ORTHO05D007433 8.4e-18 95.5 178 36.5
AT5G07020 Arabidopsis thaliana HOM05D005878 ORTHO05D007433 1.1e-17 95.1 118 44.9
Carub.0006s0594 Capsella rubella HOM05D005878 ORTHO05D007433 1.1e-17 95.1 116 46.6
MELO3C012494.2 Cucumis melo HOM05D005878 ORTHO05D007433 1.1e-17 95.1 187 38.0
Nn7g36933 Nelumbo nucifera HOM05D005878 ORTHO05D007433 1.1e-17 95.1 223 37.7
BcaB05g21633 Brassica carinata HOM05D005878 ORTHO05D007433 1.4e-17 94.7 199 39.2
Potri.003G192800 Populus trichocarpa HOM05D005878 ORTHO05D007433 1.4e-17 94.7 196 37.8
Actinidia01690 Actinidia chinensis HOM05D005878 ORTHO05D007433 1.9e-17 94.4 203 36.0
AL6G17170 Arabidopsis lyrata HOM05D005878 ORTHO05D007433 1.9e-17 94.4 116 45.7
Hma1.2p1_0233F.1_g098360 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.9e-17 94.4 138 42.0
arahy.Tifrunner.gnm1.ann1.RJ91AH Arachis hypogaea HOM05D005878 ORTHO05D007433 2.4e-17 94.0 194 37.6
Dinv02557 Davidia involucrata HOM05D005878 ORTHO05D007433 2.4e-17 94.0 135 43.0
QL04p021553 Quercus lobata HOM05D005878 ORTHO05D007433 2.4e-17 94.0 212 36.3
Duzib114G0830 Durio zibethinus HOM05D005878 ORTHO05D007433 3.2e-17 93.6 193 37.3
Eucgr.G03205 Eucalyptus grandis HOM05D005878 ORTHO05D007433 3.2e-17 93.6 195 34.4
arahy.Tifrunner.gnm1.ann1.7Y8XE1 Arachis hypogaea HOM05D005878 ORTHO05D007433 4.2e-17 93.2 200 36.5
PGR031G0581 Punica granatum HOM05D005878 ORTHO05D007433 4.2e-17 93.2 202 37.1
Thhalv10014567m.g Eutrema salsugineum HOM05D005878 ORTHO05D007433 5.4e-17 92.8 196 37.2
MD00G1152600 Malus domestica HOM05D005878 ORTHO05D007433 5.4e-17 92.8 212 35.4
MD07G1043600 Malus domestica HOM05D005878 ORTHO05D007433 5.4e-17 92.8 202 36.1
BcaNung04204 Brassica carinata HOM05D005878 ORTHO05D007433 9.2e-17 92.0 190 38.4
C09p69150 Brassica napus HOM05D005878 ORTHO05D007433 9.2e-17 92.0 190 38.4
BolC9t59659H Brassica oleracea HOM05D005878 ORTHO05D007433 9.2e-17 92.0 190 38.4
A10p28810 Brassica napus HOM05D005878 ORTHO05D007433 1.2e-16 91.7 190 38.4
HPP92_016121 Vanilla planifolia HOM05D005878 ORTHO05D007433 1.2e-16 91.7 205 34.6
CARHR206130 Cardamine hirsuta HOM05D005878 ORTHO05D007433 1.6e-16 91.3 181 38.7
Hund13399 Selenicereus undatus HOM05D005878 ORTHO05D007433 1.6e-16 91.3 250 34.8
Sc14g0005230 Simmondsia chinensis HOM05D005878 ORTHO05D007433 1.6e-16 91.3 188 39.4
TAR633G2731 Trochodendron aralioides HOM05D005878 ORTHO05D007433 2.7e-16 90.5 221 33.9
Cc00_g09800 Coffea canephora HOM05D005878 ORTHO05D007433 6.0e-16 89.4 212 35.8
THA.LOC104799332 Tarenaya hassleriana HOM05D005878 ORTHO05D007433 6.0e-16 89.4 192 36.5
Nitab4.5_0002838g0030 Nicotiana tabacum HOM05D005878 ORTHO05D007433 1.0e-15 88.6 226 34.5
MBI03_g45113_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.7e-15 87.8 234 34.6
MBI03_g46805_MAGBIO Magnolia biondii HOM05D005878 ORTHO05D007433 1.7e-15 87.8 234 34.6
FAN06G2676 Fragaria x ananassa HOM05D005878 ORTHO05D007433 2.3e-15 87.4 240 32.5
Oeu006783.1 Olea europaea HOM05D005878 ORTHO05D007433 2.3e-15 87.4 214 34.6
BcaC06g32524 Brassica carinata HOM05D005878 ORTHO05D007433 3.9e-15 86.7 203 35.5
BraA10t44928Z Brassica rapa HOM05D005878 ORTHO05D007433 3.9e-15 86.7 197 35.0
FAN01G0732 Fragaria x ananassa HOM05D005878 ORTHO05D007433 5.1e-15 86.3 227 32.2
Sp6g35860 Schrenkiella parvula HOM05D005878 ORTHO05D007433 6.6e-15 85.9 212 35.8
DCAR_006594 Daucus carota HOM05D005878 ORTHO05D007433 8.7e-15 85.5 221 33.9
vmacro20585 Vaccinium macrocarpon HOM05D005878 ORTHO05D007433 8.7e-15 85.5 182 35.2
FvH4_7g03940 Fragaria vesca HOM05D005878 ORTHO05D007433 1.9e-14 84.3 236 31.8
Cpa.g.sc188.4 Carica papaya HOM05D005878 ORTHO05D007433 4.3e-14 83.2 137 42.3
SMO143G0125 Selaginella moellendorffii HOM05D005878 ORTHO05D007433 7.3e-14 82.4 184 34.2
SGA_v2.0_scaffold430G51553 Striga asiatica HOM05D005878 ORTHO05D007433 7.3e-14 82.4 125 40.8
Eucgr.L03611 Eucalyptus grandis HOM05D005878 ORTHO05D007433 1.2e-13 81.6 80 53.8
AUR62001069 Chenopodium quinoa HOM05D005878 ORTHO05D007433 2.1e-13 80.9 125 41.6
Haze_02979 Corylus avellana HOM05D005878 ORTHO05D007433 2.8e-13 80.5 236 33.5
BcaC03g13176 Brassica carinata HOM05D005878 ORTHO05D007433 4.7e-13 79.7 80 51.2
Zm00001eb182020 Zea mays HOM05D005878 ORTHO05D007433 8.1e-13 79.0 199 31.7
Hma1.2p1_0233F.1_g098370 Hydrangea macrophylla HOM05D005878 ORTHO05D007433 1.1e-12 78.6 135 41.5
Aa31sc25G160 Aethionema arabicum HOM05D005878 ORTHO05D007433 3.1e-12 77.0 124 37.1
unitig_22.g5332 Utricularia gibba HOM05D005878 ORTHO05D007433 5.3e-12 76.3 265 30.9
TPR.G1450 Trifolium pratense HOM05D005878 ORTHO05D007433 5.8e-11 72.8 124 38.7
BraA02t04902Z Brassica rapa HOM05D005878 ORTHO05D007433 2.4e-09 67.4 215 30.2
Lj9A656G41 Lonicera japonica HOM05D005878 ORTHO05D007433 2.4e-09 67.4 188 32.4
FAN03G0529 Fragaria x ananassa HOM05D005878 ORTHO05D007433 3.5e-08 63.5 252 29.8
AUR62031722 Chenopodium quinoa HOM05D005878 ORTHO05D007433 6.0e-08 62.8 67 52.2
A03p56860 Brassica napus HOM05D005878 ORTHO05D007433 9.6e-06 55.5 105 37.1


User provided reference genes

Program Settings