Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50285 Chara braunii HOM05D007370 ORTHO05D009394 0.0e+00 1259.6 643 100.0
Pp3c14_3570 Physcomitrium patens HOM05D007370 ORTHO05D009394 1.0e-96 358.6 383 52.7
MBI18_g37561_MAGBIO Magnolia biondii HOM05D007370 ORTHO05D009394 2.2e-96 357.5 409 48.4
Medtr2g034140 Medicago truncatula HOM05D007370 ORTHO05D009394 2.2e-96 357.5 395 47.6
RcHm_v2.0_Chr4g0425231 Rosa chinensis HOM05D007370 ORTHO05D009394 2.2e-96 357.5 384 48.7
Atru.chr4.3000 Acer truncatum HOM05D007370 ORTHO05D009394 3.8e-96 356.7 388 49.2
FAN07G1244 Fragaria x ananassa HOM05D007370 ORTHO05D009394 6.5e-96 355.9 416 46.2
Dinv15168 Davidia involucrata HOM05D007370 ORTHO05D009394 1.1e-95 355.1 402 47.3
FvH4_4g19730 Fragaria vesca HOM05D007370 ORTHO05D009394 1.1e-95 355.1 369 49.6
Haze_01298 Corylus avellana HOM05D007370 ORTHO05D009394 7.1e-95 352.4 411 46.0
Gohir.A01G034400 Gossypium hirsutum HOM05D007370 ORTHO05D009394 7.1e-95 352.4 380 48.2
SEGI_11896 Sequoiadendron giganteum HOM05D007370 ORTHO05D009394 1.6e-94 351.3 383 47.8
Prupe.1G117500 Prunus persica HOM05D007370 ORTHO05D009394 2.7e-94 350.5 407 46.2
Thecc.04G300700 Theobroma cacao HOM05D007370 ORTHO05D009394 2.7e-94 350.5 385 47.5
DCAR_002511 Daucus carota HOM05D007370 ORTHO05D009394 2.3e-93 347.4 411 46.0
Eucgr.A00294 Eucalyptus grandis HOM05D007370 ORTHO05D009394 3.9e-93 346.7 379 47.8
Glyma.09G035700 Glycine max HOM05D007370 ORTHO05D009394 5.1e-93 346.3 399 45.9
arahy.Tifrunner.gnm1.ann1.VHF2FI Arachis hypogaea HOM05D007370 ORTHO05D009394 6.7e-93 345.9 396 47.2
CiPaw.01G138600 Carya illinoinensis HOM05D007370 ORTHO05D009394 6.7e-93 345.9 410 46.6
Cc03_g00820 Coffea canephora HOM05D007370 ORTHO05D009394 6.7e-93 345.9 409 46.2
TPR.G27253 Trifolium pratense HOM05D007370 ORTHO05D009394 6.7e-93 345.9 392 46.2
COL.COLO4_34615 Corchorus olitorius HOM05D007370 ORTHO05D009394 8.7e-93 345.5 395 47.3
Manes.15G004200 Manihot esculenta HOM05D007370 ORTHO05D009394 8.7e-93 345.5 399 45.6
Mapoly0007s0102 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.5e-92 344.7 402 47.0
PGR142G3192 Punica granatum HOM05D007370 ORTHO05D009394 1.9e-92 344.4 426 44.6
Sc13g0006460 Simmondsia chinensis HOM05D007370 ORTHO05D009394 2.5e-92 344.0 411 46.0
Duzib052G0732 Durio zibethinus HOM05D007370 ORTHO05D009394 9.6e-92 342.0 386 47.2
Migut.G00060 Erythranthe guttata HOM05D007370 ORTHO05D009394 9.6e-92 342.0 386 46.6
Nn6g33643 Nelumbo nucifera HOM05D007370 ORTHO05D009394 9.6e-92 342.0 392 49.2
arahy.Tifrunner.gnm1.ann1.HMTG6S Arachis hypogaea HOM05D007370 ORTHO05D009394 2.1e-91 340.9 391 47.3
Lj6g0027049 Lotus japonicus HOM05D007370 ORTHO05D009394 2.1e-91 340.9 399 45.6
Rhsim02G0003800 Rhododendron simsii HOM05D007370 ORTHO05D009394 2.1e-91 340.9 401 46.6
VMungo0540G1057 Vigna mungo HOM05D007370 ORTHO05D009394 2.1e-91 340.9 379 48.0
ATR0693G166 Amborella trichopoda HOM05D007370 ORTHO05D009394 8.2e-91 339.0 390 48.2
Psat1g161680 Pisum sativum HOM05D007370 ORTHO05D009394 1.4e-90 338.2 407 45.2
Sopen12g033950 Solanum pennellii HOM05D007370 ORTHO05D009394 1.8e-90 337.8 400 46.5
Phvul.006G118000 Phaseolus vulgaris HOM05D007370 ORTHO05D009394 3.1e-90 337.0 381 47.8
CsaV3_6G022350 Cucumis sativus L. HOM05D007370 ORTHO05D009394 4.1e-90 336.7 407 45.0
Gorai.002G030100 Gossypium raimondii HOM05D007370 ORTHO05D009394 1.5e-89 334.7 406 44.6
Sed0008389 Sechium edule HOM05D007370 ORTHO05D009394 1.0e-88 332.0 389 45.2
Potri.010G145700 Populus trichocarpa HOM05D007370 ORTHO05D009394 1.3e-88 331.6 392 44.1
Solyc12g099270.2 Solanum lycopersicum HOM05D007370 ORTHO05D009394 1.7e-88 331.3 396 46.0
SalBow8G4515 Salvia bowleyana HOM05D007370 ORTHO05D009394 3.8e-88 330.1 388 46.1
ECA248G2723 Erigeron canadensis HOM05D007370 ORTHO05D009394 1.9e-87 327.8 399 44.9
TAR362G0601 Trochodendron aralioides HOM05D007370 ORTHO05D009394 9.3e-87 325.5 379 46.4
EL10Ac3g05507 Beta vulgaris HOM05D007370 ORTHO05D009394 1.2e-86 325.1 410 44.6
CDE08G1199 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 1.3e-85 321.6 426 41.8
Peaxi162Scf00120g00023 Petunia axillaris HOM05D007370 ORTHO05D009394 1.3e-85 321.6 418 42.3
QL06p012270 Quercus lobata HOM05D007370 ORTHO05D009394 1.8e-85 321.2 357 47.9
AagrBONN_evm.TU.Sc2ySwM_228.2788 Anthoceros agrestis HOM05D007370 ORTHO05D009394 2.3e-85 320.9 359 49.3
HanXRQChr01g0030981 Helianthus annuus HOM05D007370 ORTHO05D009394 2.3e-85 320.9 402 44.3
unitig_37.g12412 Utricularia gibba HOM05D007370 ORTHO05D009394 5.1e-85 319.7 478 41.4
Lalb_Chr20g0120861 Lupinus albus HOM05D007370 ORTHO05D009394 6.7e-85 319.3 413 43.6
PGSC0003DMG400004697 Solanum tuberosum HOM05D007370 ORTHO05D009394 1.5e-84 318.2 400 44.5
Zm00001eb356360 Zea mays HOM05D007370 ORTHO05D009394 1.9e-84 317.8 367 46.3
CAN.G484.61 Capsicum annuum HOM05D007370 ORTHO05D009394 3.3e-84 317.0 397 44.3
MD16G1154200 Malus domestica HOM05D007370 ORTHO05D009394 5.7e-84 316.2 385 46.2
Nitab4.5_0002150g0160 Nicotiana tabacum HOM05D007370 ORTHO05D009394 1.6e-83 314.7 421 41.8
Nitab4.5_0002294g0020 Nicotiana tabacum HOM05D007370 ORTHO05D009394 2.8e-83 313.9 401 42.6
arahy.Tifrunner.gnm1.ann1.DXY8A4 Arachis hypogaea HOM05D007370 ORTHO05D009394 1.4e-82 311.6 417 43.2
Lj6A691G74 Lonicera japonica HOM05D007370 ORTHO05D009394 3.4e-81 307.0 396 43.2
Os05g0157300 Oryza sativa ssp. japonica HOM05D007370 ORTHO05D009394 3.2e-79 300.4 364 44.0
AUR62039281 Chenopodium quinoa HOM05D007370 ORTHO05D009394 7.2e-79 299.3 405 42.5
Lsat_1_v5_gn_1_41060 Lactuca sativa HOM05D007370 ORTHO05D009394 1.2e-78 298.5 322 47.2
AUR62016207 Chenopodium quinoa HOM05D007370 ORTHO05D009394 3.6e-78 297.0 396 41.2
FAN12G3716 Fragaria x ananassa HOM05D007370 ORTHO05D009394 2.2e-72 277.7 369 42.3
Sabra10G0112300 Salix brachista HOM05D007370 ORTHO05D009394 2.1e-70 271.2 387 39.8
Mapoly0007s0137 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.5e-68 265.0 401 40.9
Gohir.D01G023538 Gossypium hirsutum HOM05D007370 ORTHO05D009394 2.6e-65 254.2 280 47.1
SMO145G0205 Selaginella moellendorffii HOM05D007370 ORTHO05D009394 2.6e-65 254.2 390 41.8
CSS0048431 Camellia sinensis var. sinensis HOM05D007370 ORTHO05D009394 5.9e-65 253.1 315 45.1
TWI09G1560 Tripterygium wilfordii HOM05D007370 ORTHO05D009394 1.1e-63 248.8 376 39.9
Ah.04g156700 Amaranthus hybridus HOM05D007370 ORTHO05D009394 2.5e-63 247.7 411 38.0
MELO3C021271.2 Cucumis melo HOM05D007370 ORTHO05D009394 7.2e-63 246.1 294 43.9
arahy.Tifrunner.gnm1.ann1.CV4FMG Arachis hypogaea HOM05D007370 ORTHO05D009394 9.4e-63 245.7 325 41.5
Hund11933 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.0e-61 242.3 408 38.5
Cpa.g.sc9.57 Carica papaya HOM05D007370 ORTHO05D009394 2.9e-56 224.2 308 40.6
Peaxi162Scf01160g00001 Petunia axillaris HOM05D007370 ORTHO05D009394 1.1e-55 222.2 390 36.7
vmacro15182 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 2.5e-55 221.1 272 43.4
Eucgr.A00046 Eucalyptus grandis HOM05D007370 ORTHO05D009394 1.4e-53 215.3 215 50.7
SGA_v2.0_scaffold104G30077 Striga asiatica HOM05D007370 ORTHO05D009394 5.2e-53 213.4 312 40.4
Ca_03237_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 6.5e-48 196.4 186 55.9
HPP92_027782 Vanilla planifolia HOM05D007370 ORTHO05D009394 2.1e-46 191.4 246 41.9
GSVIVG01034991001 Vitis vinifera HOM05D007370 ORTHO05D009394 4.7e-46 190.3 236 42.8
ClCG06G004600 Citrullus lanatus HOM05D007370 ORTHO05D009394 1.3e-43 182.2 396 32.6
Hund11975 Selenicereus undatus HOM05D007370 ORTHO05D009394 1.5e-39 168.7 253 37.5
QL06p020122 Quercus lobata HOM05D007370 ORTHO05D009394 5.7e-36 156.8 294 34.7
Glyma.15G140501 Glycine max HOM05D007370 ORTHO05D009394 1.7e-27 128.6 203 38.9
vmacro15183 Vaccinium macrocarpon HOM05D007370 ORTHO05D009394 3.2e-26 124.4 125 52.8
arahy.Tifrunner.gnm1.ann1.Y96K7L Arachis hypogaea HOM05D007370 ORTHO05D009394 6.0e-25 120.2 187 38.0
CDE02G4406 Ceratophyllum demersum HOM05D007370 ORTHO05D009394 9.5e-23 112.8 116 50.9
Mapoly0007s0289 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.7e-19 102.1 111 45.0
Mapoly0252s0002 Marchantia polymorpha HOM05D007370 ORTHO05D009394 1.7e-19 102.1 111 45.0
MD13G1153900 Malus domestica HOM05D007370 ORTHO05D009394 1.9e-18 98.6 85 58.8
HPP92_027781 Vanilla planifolia HOM05D007370 ORTHO05D009394 1.0e-16 92.8 130 42.3
Oeu001173.1 Olea europaea HOM05D007370 ORTHO05D009394 1.6e-14 85.5 123 39.8
Ca_00981_v3 Cicer arietinum L. HOM05D007370 ORTHO05D009394 2.3e-13 81.6 119 42.0
MD13G1154300 Malus domestica HOM05D007370 ORTHO05D009394 1.3e-08 65.9 49 67.3
Actinidia14258 Actinidia chinensis HOM05D001648 ORTHO05D001657 3.0e-08 64.7 65 50.8
Glyma.18G184250 Glycine max HOM05D007370 ORTHO05D009394 1.9e-07 62.0 71 38.0
Potri.008G105401 Populus trichocarpa HOM05D007370 ORTHO05D009394 3.6e-06 57.8 63 46.0


User provided reference genes

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