Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g50115 Chara braunii HOM05D005523 ORTHO05D007089 0.0e+00 2768.4 1399 100.0
Nn4g23450 Nelumbo nucifera HOM05D005523 ORTHO05D007089 4.8e-88 330.9 1102 26.4
Zm00001eb029510 Zea mays HOM05D005523 ORTHO05D007089 1.2e-86 326.2 463 42.3
Pp3c13_5080 Physcomitrium patens HOM05D005523 ORTHO05D007089 2.2e-85 322.0 451 42.8
TWI79G0260 Tripterygium wilfordii HOM05D005523 ORTHO05D007089 1.1e-84 319.7 1142 26.5
Mapoly0013s0146 Marchantia polymorpha HOM05D005523 ORTHO05D007089 2.5e-84 318.5 448 41.5
TAR374G1461 Trochodendron aralioides HOM05D005523 ORTHO05D007089 4.2e-84 317.8 564 36.9
Aqoxy3G00520 Aquilegia oxysepala HOM05D005523 ORTHO05D007089 5.5e-84 317.4 1159 25.4
PGR119G1690 Punica granatum HOM05D005523 ORTHO05D007089 1.2e-83 316.2 388 45.1
CiPaw.05G124500 Carya illinoinensis HOM05D005523 ORTHO05D007089 3.6e-83 314.7 450 39.6
CARHR145990 Cardamine hirsuta HOM05D005523 ORTHO05D007089 1.0e-82 313.2 456 39.9
Peaxi162Scf00175g00035 Petunia axillaris HOM05D005523 ORTHO05D007089 1.4e-82 312.8 454 41.4
QL03p074024 Quercus lobata HOM05D005523 ORTHO05D007089 2.3e-82 312.0 392 44.1
QL03p074443 Quercus lobata HOM05D005523 ORTHO05D007089 2.3e-82 312.0 392 44.1
CANSAT64G1787 Cannabis sativa HOM05D005523 ORTHO05D007089 6.8e-82 310.5 560 36.2
Atru.chr11.1618 Acer truncatum HOM05D005523 ORTHO05D007089 8.8e-82 310.1 461 39.3
Sed0024899 Sechium edule HOM05D005523 ORTHO05D007089 8.8e-82 310.1 388 43.6
GSVIVG01012228001 Vitis vinifera HOM05D005523 ORTHO05D007089 1.2e-81 309.7 471 38.9
Ca_18798_v3 Cicer arietinum L. HOM05D005523 ORTHO05D007089 1.5e-81 309.3 390 43.8
Thecc.02G329500 Theobroma cacao HOM05D005523 ORTHO05D007089 1.5e-81 309.3 442 41.2
AL5G13440 Arabidopsis lyrata HOM05D005523 ORTHO05D007089 2.0e-81 308.9 441 40.4
COL.COLO4_27873 Corchorus olitorius HOM05D005523 ORTHO05D007089 2.0e-81 308.9 442 40.7
Sp2g14490 Schrenkiella parvula HOM05D005523 ORTHO05D007089 2.6e-81 308.5 442 40.3
AagrBONN_evm.TU.Sc2ySwM_228.676 Anthoceros agrestis HOM05D005523 ORTHO05D007089 3.4e-81 308.1 396 43.9
CAN.G707.6 Capsicum annuum HOM05D005523 ORTHO05D007089 3.4e-81 308.1 552 35.9
Hund25171 Selenicereus undatus HOM05D005523 ORTHO05D007089 3.4e-81 308.1 589 35.8
A06p43010 Brassica napus HOM05D005523 ORTHO05D007089 4.4e-81 307.8 443 40.2
Prupe.1G288300 Prunus persica HOM05D005523 ORTHO05D007089 4.4e-81 307.8 440 40.9
MD16G1060200 Malus domestica HOM05D005523 ORTHO05D007089 5.7e-81 307.4 440 41.4
BolC7t43916H Brassica oleracea HOM05D005523 ORTHO05D007089 1.3e-80 306.2 438 40.9
Thhalv10003838m.g Eutrema salsugineum HOM05D005523 ORTHO05D007089 1.3e-80 306.2 438 40.6
Cc11_g11910 Coffea canephora HOM05D005523 ORTHO05D007089 1.7e-80 305.8 407 42.8
VMungo0251G0731 Vigna mungo HOM05D005523 ORTHO05D007089 1.7e-80 305.8 394 43.9
C07p34020 Brassica napus HOM05D005523 ORTHO05D007089 2.8e-80 305.1 443 40.2
Ciclev10033727m.g Citrus clementina HOM05D005523 ORTHO05D007089 2.8e-80 305.1 391 43.5
Migut.L01183 Erythranthe guttata HOM05D005523 ORTHO05D007089 2.8e-80 305.1 445 41.1
Glyma.20G025400 Glycine max HOM05D005523 ORTHO05D007089 2.8e-80 305.1 390 43.8
Phvul.002G101900 Phaseolus vulgaris HOM05D005523 ORTHO05D007089 4.8e-80 304.3 396 43.4
CsaV3_5G033360 Cucumis sativus L. HOM05D005523 ORTHO05D007089 6.3e-80 303.9 388 42.8
DCAR_026677 Daucus carota HOM05D005523 ORTHO05D007089 6.3e-80 303.9 1086 25.0
Gohir.D12G164000 Gossypium hirsutum HOM05D005523 ORTHO05D007089 6.3e-80 303.9 390 43.1
Potri.010G157700 Populus trichocarpa HOM05D005523 ORTHO05D007089 6.3e-80 303.9 390 42.6
TPR.G34024 Trifolium pratense HOM05D005523 ORTHO05D007089 8.3e-80 303.5 390 42.6
AT2G03667 Arabidopsis thaliana HOM05D005523 ORTHO05D007089 1.1e-79 303.1 438 40.2
Gorai.008G176600 Gossypium raimondii HOM05D005523 ORTHO05D007089 1.1e-79 303.1 390 43.1
Medtr4g083180 Medicago truncatula HOM05D005523 ORTHO05D007089 1.1e-79 303.1 390 42.6
Sopen05g007030 Solanum pennellii HOM05D005523 ORTHO05D007089 1.1e-79 303.1 441 40.6
Carub.0005s0279 Capsella rubella HOM05D005523 ORTHO05D007089 1.4e-79 302.8 438 40.0
Cc03_g11190 Coffea canephora HOM05D005523 ORTHO05D007089 1.4e-79 302.8 407 42.5
MELO3C012156.2 Cucumis melo HOM05D005523 ORTHO05D007089 1.8e-79 302.4 388 42.8
Psat7g133840 Pisum sativum HOM05D005523 ORTHO05D007089 1.8e-79 302.4 390 42.8
Lalb_Chr05g0219911 Lupinus albus HOM05D005523 ORTHO05D007089 2.4e-79 302.0 390 43.8
Solyc05g012200.3 Solanum lycopersicum HOM05D005523 ORTHO05D007089 2.4e-79 302.0 441 40.6
HPP92_001825 Vanilla planifolia HOM05D005523 ORTHO05D007089 2.4e-79 302.0 392 43.1
MD13G1061700 Malus domestica HOM05D005523 ORTHO05D007089 3.1e-79 301.6 388 43.8
PSO478G5042 Papaver somniferum HOM05D005523 ORTHO05D007089 3.1e-79 301.6 448 39.3
CSS0034602 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 4.1e-79 301.2 554 35.0
Gohir.A12G160700 Gossypium hirsutum HOM05D005523 ORTHO05D007089 4.1e-79 301.2 390 42.8
PGSC0003DMG400028314 Solanum tuberosum HOM05D005523 ORTHO05D007089 4.1e-79 301.2 441 41.3
THA.LOC104805203 Tarenaya hassleriana HOM05D005523 ORTHO05D007089 7.0e-79 300.4 389 42.7
FvH4_4g29880 Fragaria vesca HOM05D005523 ORTHO05D007089 9.1e-79 300.1 390 43.8
FAN12G2921 Fragaria x ananassa HOM05D005523 ORTHO05D007089 9.1e-79 300.1 390 43.8
Lj4g0005251 Lotus japonicus HOM05D005523 ORTHO05D007089 9.1e-79 300.1 390 42.8
Rhsim02G0238300 Rhododendron simsii HOM05D005523 ORTHO05D007089 1.2e-78 299.7 1123 25.5
arahy.Tifrunner.gnm1.ann1.1A68HA Arachis hypogaea HOM05D005523 ORTHO05D007089 1.6e-78 299.3 396 43.7
EL10Ac6g15006 Beta vulgaris HOM05D005523 ORTHO05D007089 1.6e-78 299.3 440 40.5
FAN17G1793 Fragaria x ananassa HOM05D005523 ORTHO05D007089 2.7e-78 298.5 390 43.3
FAN22G0589 Fragaria x ananassa HOM05D005523 ORTHO05D007089 2.7e-78 298.5 390 43.3
HanXRQChr17g0552771 Helianthus annuus HOM05D005523 ORTHO05D007089 3.5e-78 298.1 387 42.9
PSO017G3752 Papaver somniferum HOM05D005523 ORTHO05D007089 3.5e-78 298.1 448 39.3
arahy.Tifrunner.gnm1.ann1.5T11RT Arachis hypogaea HOM05D005523 ORTHO05D007089 5.9e-78 297.4 396 43.4
AUR62003091 Chenopodium quinoa HOM05D005523 ORTHO05D007089 5.9e-78 297.4 389 43.2
ECA234G2689 Erigeron canadensis HOM05D005523 ORTHO05D007089 5.9e-78 297.4 453 39.5
FAN07G2138 Fragaria x ananassa HOM05D005523 ORTHO05D007089 5.9e-78 297.4 390 43.3
RcHm_v2.0_Chr4g0438141 Rosa chinensis HOM05D005523 ORTHO05D007089 5.9e-78 297.4 390 43.1
unitig_26.g10286 Utricularia gibba HOM05D005523 ORTHO05D007089 1.3e-77 296.2 448 40.0
Lsat_1_v5_gn_4_11761 Lactuca sativa HOM05D005523 ORTHO05D007089 2.9e-77 295.0 390 43.3
Aa31LG2G7010 Aethionema arabicum HOM05D005523 ORTHO05D007089 8.6e-77 293.5 387 41.6
SMO364G0955 Selaginella moellendorffii HOM05D005523 ORTHO05D007089 8.0e-75 287.0 453 40.2
Cre07.g321050 Chlamydomonas reinhardtii HOM05D005523 ORTHO05D007089 6.8e-74 283.9 428 42.3
SalBow2G2481 Salvia bowleyana HOM05D005523 ORTHO05D007089 1.2e-73 283.1 411 40.6
Nitab4.5_0000231g0170 Nicotiana tabacum HOM05D005523 ORTHO05D007089 2.6e-73 282.0 364 43.1
AUR62007908 Chenopodium quinoa HOM05D005523 ORTHO05D007089 9.8e-73 280.0 397 41.1
Nitab4.5_0007061g0020 Nicotiana tabacum HOM05D005523 ORTHO05D007089 1.3e-72 279.6 444 39.4
Eucgr.G02442 Eucalyptus grandis HOM05D005523 ORTHO05D007089 8.3e-72 276.9 361 42.4
Duzib251G0966 Durio zibethinus HOM05D005523 ORTHO05D007089 1.1e-71 276.6 390 40.3
Haze_11899 Corylus avellana HOM05D005523 ORTHO05D007089 2.0e-70 272.3 547 34.4
BcaB07g30661 Brassica carinata HOM05D005523 ORTHO05D007089 6.6e-69 267.3 426 37.8
Manes.05G109800 Manihot esculenta HOM05D005523 ORTHO05D007089 8.6e-69 266.9 360 41.7
Oeu021803.1 Olea europaea HOM05D005523 ORTHO05D007089 1.0e-66 260.0 410 38.8
PRCOL_00003408 Prasinoderma coloniale HOM05D005523 ORTHO05D007089 4.0e-66 258.1 400 40.0
Cfa008872 Carpinus fangiana HOM05D005523 ORTHO05D007089 6.4e-64 250.8 410 37.3
Sc14g0007970 Simmondsia chinensis HOM05D005523 ORTHO05D007089 6.0e-62 244.2 352 39.2
vmacro10430 Vaccinium macrocarpon HOM05D005523 ORTHO05D007089 1.0e-61 243.4 387 38.8
Actinidia28650 Actinidia chinensis HOM05D005523 ORTHO05D007089 7.3e-60 237.3 383 36.8
Rhsim09G0126700 Rhododendron simsii HOM05D005523 ORTHO05D007089 4.7e-59 234.6 552 33.3
CDE10G0904 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 2.6e-57 228.8 373 37.5
BcaC06g31164 Brassica carinata HOM05D005523 ORTHO05D006344 4.4e-57 228.0 313 42.2
Actinidia36738 Actinidia chinensis HOM05D005523 ORTHO05D007089 1.7e-56 226.1 362 36.7
SGA_v2.0_scaffold16G07795 Striga asiatica HOM05D005523 ORTHO05D007089 3.7e-56 224.9 445 34.2
Lj6A778G61 Lonicera japonica HOM05D005523 ORTHO05D007089 2.1e-54 219.2 399 34.6
MBI19_g44450_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 5.1e-53 214.5 364 36.8
RcHm_v2.0_Chr7g0182531 Rosa chinensis HOM05D005523 ORTHO05D007089 4.3e-52 211.5 178 59.6
Lsat_1_v5_gn_5_70240 Lactuca sativa HOM05D005523 ORTHO05D007089 5.2e-50 204.5 154 64.9
Actinidia14169 Actinidia chinensis HOM05D005523 ORTHO05D007089 6.4e-48 197.6 290 37.6
Actinidia12916 Actinidia chinensis HOM05D005523 ORTHO05D007089 1.1e-44 186.8 166 58.4
BolC9t56002H Brassica oleracea HOM05D005523 ORTHO05D007089 7.3e-44 184.1 123 68.3
C09p31430 Brassica napus HOM05D000070 ORTHO05D006344 2.8e-43 182.2 123 68.3
Lsat_1_v5_gn_7_112061 Lactuca sativa HOM05D005523 ORTHO05D007089 4.0e-42 178.3 154 57.1
Lsat_1_v5_gn_5_143020 Lactuca sativa HOM05D005523 ORTHO05D007089 8.9e-42 177.2 294 34.4
BcaC04g21469 Brassica carinata HOM05D000070 ORTHO05D006344 1.3e-40 173.3 429 31.0
Cpa.g.sc1.134 Carica papaya HOM05D005523 ORTHO05D007089 4.6e-38 164.9 108 66.7
MBI19_g25293_MAGBIO Magnolia biondii HOM05D005523 ORTHO05D007089 9.6e-36 157.1 496 26.2
Oeu021804.1 Olea europaea HOM05D005523 ORTHO05D007089 7.1e-31 141.0 153 46.4
VMungo0251G1186 Vigna mungo HOM05D005523 ORTHO05D007089 6.6e-29 134.4 147 46.3
CDE10G0400 Ceratophyllum demersum HOM05D005523 ORTHO05D007089 8.7e-29 134.0 142 45.8
BcaB03g12091 Brassica carinata HOM05D005523 ORTHO05D007089 4.3e-28 131.7 240 29.6
ATR0177G042 Amborella trichopoda HOM05D005523 ORTHO05D007089 6.2e-27 127.9 143 42.7
CSS0024141 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 3.0e-21 109.0 117 43.6
CSS0004547 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 4.8e-19 101.7 167 34.7
Cpa.g.sc1.132 Carica papaya HOM05D005523 ORTHO05D007089 4.8e-19 101.7 129 40.3
CSS0023178 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D007089 3.8e-16 92.0 114 40.4
Os12g0574900 Oryza sativa ssp. japonica HOM05D005523 ORTHO05D007089 3.5e-14 85.5 112 38.4
ClCG05G023660 Citrullus lanatus HOM05D005523 ORTHO05D007089 1.0e-13 84.0 157 29.9
Lsat_1_v5_gn_7_82480 Lactuca sativa HOM05D005523 ORTHO05D007089 3.0e-13 82.4 84 48.8
TAR374G1311 Trochodendron aralioides HOM05D005523 ORTHO05D007089 3.0e-13 82.4 134 37.3
SEGI_10872 Sequoiadendron giganteum HOM05D005523 ORTHO05D007089 5.1e-13 81.6 100 39.0
CSS0028074 Camellia sinensis var. sinensis HOM05D005523 ORTHO05D026295 5.7e-12 78.2 102 38.2
Cpa.g.sc1.135 Carica papaya HOM05D005523 ORTHO05D007089 1.6e-06 60.1 55 61.8
CiPaw.04G124200 Carya illinoinensis HOM05D005523 ORTHO05D007089 4.6e-06 58.5 86 41.9


User provided reference genes

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