Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g49722 Chara braunii HOM05D018727 ORTHO05D020401 0.0e+00 2446.8 2026 100.0
MCO03G162 Micromonas commoda HOM05D018727 ORTHO05D020401 6.8e-59 234.6 475 30.1
Cre07.g347050 Chlamydomonas reinhardtii HOM05D018727 ORTHO05D020401 8.9e-59 234.2 494 29.6
PRCOL_00005701 Prasinoderma coloniale HOM05D018727 ORTHO05D020401 1.1e-56 227.3 476 30.3
CBR_g49721 Chara braunii HOM05D018727 ORTHO05D020401 5.3e-35 155.2 95 83.2
MCO03G459 Micromonas commoda HOM05D018727 ORTHO05D020401 8.4e-33 147.9 476 26.7
AT4G12860 Arabidopsis thaliana HOM05D000135 ORTHO05D000203 3.6e-07 62.8 151 25.8
AL9U11650 Arabidopsis lyrata HOM05D000135 ORTHO05D000203 4.6e-07 62.4 151 26.5
Sp7g09590 Schrenkiella parvula HOM05D000135 ORTHO05D000203 4.6e-07 62.4 151 26.5
Manes.09G153600 Manihot esculenta HOM05D000227 ORTHO05D000451 6.1e-07 62.0 157 26.8
COL.COLO4_07781 Corchorus olitorius HOM05D002843 ORTHO05D003086 1.8e-06 60.5 151 26.5
FAN10G0417 Fragaria x ananassa HOM05D000227 ORTHO05D000139 1.8e-06 60.5 218 26.6
FAN06G4215 Fragaria x ananassa HOM05D000122 ORTHO05D017956 3.0e-06 59.7 218 25.7
VMungo0540G0537 Vigna mungo HOM05D000227 ORTHO05D000451 3.9e-06 59.3 147 27.9
Duzib213G0303 Durio zibethinus HOM05D002843 ORTHO05D003086 5.1e-06 58.9 159 25.2
Actinidia03348 Actinidia chinensis HOM05D000227 ORTHO05D001491 6.7e-06 58.5 152 27.0
Ciclev10008338m.g Citrus clementina HOM05D000059 ORTHO05D151927 6.7e-06 58.5 222 25.2
Gohir.D07G202500 Gossypium hirsutum HOM05D000135 ORTHO05D000203 6.7e-06 58.5 151 27.2
Gorai.001G227900 Gossypium raimondii HOM05D000135 ORTHO05D000203 6.7e-06 58.5 151 27.2
Nitab4.5_0002724g0060 Nicotiana tabacum HOM05D000227 ORTHO05D000451 6.7e-06 58.5 149 29.5


User provided reference genes

Program Settings