Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g49624 Chara braunii HOM05D006711 ORTHO05D008104 1.6e-83 312.8 163 100.0
Oeu047317.1 Olea europaea HOM05D006711 ORTHO05D008104 2.0e-17 93.2 70 65.7
BcaC07g39289 Brassica carinata HOM05D006711 ORTHO05D008104 4.4e-17 92.0 65 70.8
A06p19610 Brassica napus HOM05D006711 ORTHO05D008104 4.4e-17 92.0 65 70.8
C08p22960 Brassica napus HOM05D006711 ORTHO05D008104 4.4e-17 92.0 65 70.8
BolC8t49933H Brassica oleracea HOM05D006711 ORTHO05D008104 4.4e-17 92.0 65 70.8
BraA06t25041Z Brassica rapa HOM05D006711 ORTHO05D008104 4.4e-17 92.0 65 70.8
AUR62031000 Chenopodium quinoa HOM05D006711 ORTHO05D008104 4.4e-17 92.0 65 70.8
SalBow6G5258 Salvia bowleyana HOM05D006711 ORTHO05D008104 5.8e-17 91.7 69 68.1
Sp5g13950 Schrenkiella parvula HOM05D006711 ORTHO05D008104 5.8e-17 91.7 73 65.8
Aa31LG4G16690 Aethionema arabicum HOM05D006711 ORTHO05D008104 7.5e-17 91.3 73 65.8
AL5G27360 Arabidopsis lyrata HOM05D006711 ORTHO05D008104 7.5e-17 91.3 73 65.8
BcaB01g00848 Brassica carinata HOM05D006711 ORTHO05D008104 7.5e-17 91.3 65 70.8
CARHR156770 Cardamine hirsuta HOM05D006711 ORTHO05D008104 7.5e-17 91.3 73 65.8
ATR1149G012 Amborella trichopoda HOM05D006711 ORTHO05D008104 1.3e-16 90.5 78 64.1
Thhalv10010870m.g Eutrema salsugineum HOM05D006711 ORTHO05D008104 1.3e-16 90.5 65 69.2
MBI15_g24174_MAGBIO Magnolia biondii HOM05D006711 ORTHO05D008104 1.3e-16 90.5 65 67.7
EL10Ac5g10797 Beta vulgaris HOM05D006711 ORTHO05D008104 1.7e-16 90.1 65 69.2
Oeu059193.1 Olea europaea HOM05D006711 ORTHO05D008104 1.7e-16 90.1 69 66.7
Sc04g0001970 Simmondsia chinensis HOM05D006711 ORTHO05D008104 1.7e-16 90.1 69 65.2
Ah.10g035450 Amaranthus hybridus HOM05D006711 ORTHO05D008104 2.2e-16 89.7 65 67.7
Migut.N03365 Erythranthe guttata HOM05D006711 ORTHO05D008104 2.2e-16 89.7 69 65.2
Lj4g0001750 Lotus japonicus HOM05D006711 ORTHO05D008104 2.2e-16 89.7 68 64.7
Mapoly0124s0028 Marchantia polymorpha HOM05D006711 ORTHO05D008104 2.2e-16 89.7 66 66.7
THA.LOC104821460 Tarenaya hassleriana HOM05D006711 ORTHO05D008104 2.2e-16 89.7 65 69.2
Eucgr.K02867 Eucalyptus grandis HOM05D006711 ORTHO05D008104 2.9e-16 89.4 69 63.8
THA.LOC104798980 Tarenaya hassleriana HOM05D000086 ORTHO05D008104 2.9e-16 89.4 65 67.7
DCAR_011220 Daucus carota HOM05D006711 ORTHO05D008104 3.7e-16 89.0 65 67.7
Aa31LG11G810 Aethionema arabicum HOM05D006711 ORTHO05D008104 4.9e-16 88.6 65 69.2
Aqoxy3G00948 Aquilegia oxysepala HOM05D006711 ORTHO05D008104 4.9e-16 88.6 65 67.7
arahy.Tifrunner.gnm1.ann1.5NY27E Arachis hypogaea HOM05D006711 ORTHO05D008104 4.9e-16 88.6 72 62.5
PSO478G1559 Papaver somniferum HOM05D006711 ORTHO05D008104 4.9e-16 88.6 65 66.2
Sabra12G0055800 Salix brachista HOM05D006711 ORTHO05D008104 4.9e-16 88.6 65 67.7
Potri.012G078000 Populus trichocarpa HOM05D006711 ORTHO05D008104 6.4e-16 88.2 65 67.7
Potri.015G073300 Populus trichocarpa HOM05D006711 ORTHO05D008104 6.4e-16 88.2 65 67.7
Hund09419 Selenicereus undatus HOM05D006711 ORTHO05D008104 6.4e-16 88.2 65 67.7
vmacro05808 Vaccinium macrocarpon HOM05D006711 ORTHO05D008104 8.3e-16 87.8 69 65.2
Gohir.A12G275900 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.1e-15 87.4 70 62.9
Gorai.008G297100 Gossypium raimondii HOM05D006711 ORTHO05D008104 1.1e-15 87.4 70 62.9
Sabra15G0097500 Salix brachista HOM05D006711 ORTHO05D008104 1.1e-15 87.4 65 69.2
Cfa019085 Carpinus fangiana HOM05D006711 ORTHO05D008104 1.4e-15 87.0 65 64.6
CsaV3_1G008300 Cucumis sativus L. HOM05D006711 ORTHO05D008104 1.4e-15 87.0 65 67.7
Atru.chr9.2428 Acer truncatum HOM05D006711 ORTHO05D008104 1.9e-15 86.7 65 66.2
Actinidia33966 Actinidia chinensis HOM05D006711 ORTHO05D008104 1.9e-15 86.7 69 63.8
Cpa.g.sc134.10 Carica papaya HOM05D006711 ORTHO05D008104 1.9e-15 86.7 65 63.1
MELO3C002246.2 Cucumis melo HOM05D006711 ORTHO05D008104 1.9e-15 86.7 65 67.7
Duzib068G0631 Durio zibethinus HOM05D006711 ORTHO05D008104 1.9e-15 86.7 65 66.2
Gohir.D12G276600 Gossypium hirsutum HOM05D006711 ORTHO05D008104 1.9e-15 86.7 65 66.2
Pp3c3_16770 Physcomitrium patens HOM05D006711 ORTHO05D008104 1.9e-15 86.7 68 67.6
GSVIVG01032507001 Vitis vinifera HOM05D006711 ORTHO05D008104 1.9e-15 86.7 65 67.7
Hma1.2p1_0697F.1_g204840 Hydrangea macrophylla HOM05D006711 ORTHO05D008104 2.4e-15 86.3 69 62.3
Manes.14G068400 Manihot esculenta HOM05D006711 ORTHO05D008104 2.4e-15 86.3 65 66.2
Medtr4g106700 Medicago truncatula HOM05D006711 ORTHO05D008104 2.4e-15 86.3 65 66.2
PSO063G1690 Papaver somniferum HOM05D006711 ORTHO05D008104 2.4e-15 86.3 65 64.6
PSO832G1815 Papaver somniferum HOM05D006711 ORTHO05D008104 2.4e-15 86.3 65 64.6
TWI15G0492 Tripterygium wilfordii HOM05D006711 ORTHO05D008104 2.4e-15 86.3 65 64.6
Ca_21901_v3 Cicer arietinum L. HOM05D006711 ORTHO05D008104 3.2e-15 85.9 65 64.6
COL.COLO4_24770 Corchorus olitorius HOM05D006711 ORTHO05D008104 3.2e-15 85.9 65 66.2
Glyma.05G035600 Glycine max HOM05D006711 ORTHO05D008104 3.2e-15 85.9 68 67.6
HanXRQChr09g0265981 Helianthus annuus HOM05D006711 ORTHO05D008104 3.2e-15 85.9 69 63.8
PSO017G6527 Papaver somniferum HOM05D006711 ORTHO05D008104 3.2e-15 85.9 65 64.6
TPR.G37552 Trifolium pratense HOM05D006711 ORTHO05D008104 3.2e-15 85.9 65 64.6
GSVIVG01007800001 Vitis vinifera HOM05D006711 ORTHO05D008104 3.2e-15 85.9 65 66.2
CANSAT11G1423 Cannabis sativa HOM05D006711 ORTHO05D008104 4.1e-15 85.5 65 64.6
Lsat_1_v5_gn_4_181601 Lactuca sativa HOM05D006711 ORTHO05D008104 4.1e-15 85.5 63 69.8
AUR62008246 Chenopodium quinoa HOM05D001451 ORTHO05D008104 7.0e-15 84.7 60 71.7
ClCG01G014050 Citrullus lanatus HOM05D006711 ORTHO05D008104 7.0e-15 84.7 65 64.6
Duzib084G0075 Durio zibethinus HOM05D006711 ORTHO05D008104 7.0e-15 84.7 65 64.6
Thecc.03G007500 Theobroma cacao HOM05D006711 ORTHO05D008104 7.0e-15 84.7 65 64.6
CDE10G0118 Ceratophyllum demersum HOM05D001322 ORTHO05D001301 9.2e-15 84.3 77 55.8
Cc07_g02450 Coffea canephora HOM05D006711 ORTHO05D008104 9.2e-15 84.3 66 66.7
Phvul.003G198200 Phaseolus vulgaris HOM05D006711 ORTHO05D008104 9.2e-15 84.3 68 66.2
Psat4g057240 Pisum sativum HOM05D006711 ORTHO05D008104 9.2e-15 84.3 65 64.6
PGR044G2080 Punica granatum HOM05D006711 ORTHO05D008104 9.2e-15 84.3 65 64.6
AagrBONN_evm.TU.Sc2ySwM_368.1224 Anthoceros agrestis HOM05D006711 ORTHO05D008104 1.2e-14 84.0 64 68.8
Carub.0005s1414 Capsella rubella HOM05D000086 ORTHO05D008104 1.2e-14 84.0 68 66.2
Ciclev10023110m.g Citrus clementina HOM05D006711 ORTHO05D008104 1.2e-14 84.0 65 66.2
CDE10G0426 Ceratophyllum demersum HOM05D006711 ORTHO05D008104 1.6e-14 83.6 65 63.1
HPP92_010905 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.7e-14 82.8 71 57.7
HPP92_010907 Vanilla planifolia HOM05D006711 ORTHO05D008104 2.7e-14 82.8 71 57.7
MD06G1177900 Malus domestica HOM05D006711 ORTHO05D008104 3.5e-14 82.4 65 63.1
MD14G1184500 Malus domestica HOM05D006711 ORTHO05D008104 3.5e-14 82.4 65 63.1
Sed0004980 Sechium edule HOM05D006711 ORTHO05D008104 3.5e-14 82.4 65 61.5
FvH4_5g05020 Fragaria vesca HOM05D006711 ORTHO05D008104 4.6e-14 82.0 65 64.6
FAN04G0211 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-14 82.0 65 64.6
FAN08G2471 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-14 82.0 65 64.6
FAN13G1278 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-14 82.0 65 64.6
FAN18G1479 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-14 82.0 65 64.6
FAN18G2156 Fragaria x ananassa HOM05D006711 ORTHO05D008104 4.6e-14 82.0 65 64.6
HanXRQChr12g0385511 Helianthus annuus HOM05D006711 ORTHO05D008104 7.8e-14 81.3 69 62.3
SEGI_30617 Sequoiadendron giganteum HOM05D006711 ORTHO05D008104 1.0e-13 80.9 65 58.5
Os09g0375900 Oryza sativa ssp. japonica HOM05D006711 ORTHO05D008104 1.7e-13 80.1 65 63.1
Zm00001eb311470 Zea mays HOM05D006711 ORTHO05D008104 1.7e-13 80.1 65 63.1
CiPaw.12G024900 Carya illinoinensis HOM05D006711 ORTHO05D008104 3.0e-13 79.3 77 59.7
CiPaw.11G029900 Carya illinoinensis HOM05D006711 ORTHO05D008104 5.0e-13 78.6 59 69.5
Eucgr.J02179 Eucalyptus grandis HOM05D006711 ORTHO05D008104 8.6e-13 77.8 73 53.4
Prupe.5G177100 Prunus persica HOM05D006711 ORTHO05D008104 8.6e-13 77.8 65 58.5
Peaxi162Scf00429g00118 Petunia axillaris HOM05D006711 ORTHO05D008104 1.1e-12 77.4 65 58.5
Nitab4.5_0002792g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 1.9e-12 76.6 65 58.5
Nitab4.5_0004762g0010 Nicotiana tabacum HOM05D006711 ORTHO05D008104 3.3e-12 75.9 65 58.5
Sopen11g029530 Solanum pennellii HOM05D006711 ORTHO05D008104 7.3e-12 74.7 65 58.5
Oeu006591.3 Olea europaea HOM05D006711 ORTHO05D008104 9.5e-12 74.3 92 47.8
Pp3c14_16830 Physcomitrium patens HOM05D006711 ORTHO05D008104 9.5e-12 74.3 66 60.6
CAN.G742.33 Capsicum annuum HOM05D006711 ORTHO05D008104 1.2e-11 73.9 65 56.9
Lalb_Chr12g0201501 Lupinus albus HOM05D006711 ORTHO05D008104 1.2e-11 73.9 59 62.7
PRCOL_00004863 Prasinoderma coloniale HOM05D006711 ORTHO05D008104 1.1e-10 70.9 68 52.9
unitig_46.g17997 Utricularia gibba HOM05D006711 ORTHO05D008104 1.4e-10 70.5 84 50.0
ATR0820G148 Amborella trichopoda HOM05D006711 ORTHO05D008104 5.2e-10 68.6 72 54.2
Rhsim08G0056600 Rhododendron simsii HOM05D000086 ORTHO05D000983 6.8e-10 68.2 56 60.7
Nn4g22854 Nelumbo nucifera HOM05D006711 ORTHO05D008104 1.2e-09 67.4 52 63.5
TAR622G0690 Trochodendron aralioides HOM05D001464 ORTHO05D002836 2.6e-09 66.2 53 60.4
Haze_07479 Corylus avellana HOM05D006711 ORTHO05D008104 9.8e-09 64.3 48 66.7
Rhsim10G0024700 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.3e-08 63.9 69 50.7
Rhsim10G0024900 Rhododendron simsii HOM05D006711 ORTHO05D008104 1.7e-08 63.5 61 57.4
ATR0661G003 Amborella trichopoda HOM05D006711 ORTHO05D008104 2.2e-08 63.2 74 50.0
QL10p013547 Quercus lobata HOM05D006711 ORTHO05D008104 2.2e-08 63.2 48 68.8
Sed0016611 Sechium edule HOM05D006711 ORTHO05D008104 2.9e-08 62.8 65 53.8
RcHm_v2.0_Chr7g0194021 Rosa chinensis HOM05D006711 ORTHO05D008104 6.4e-08 61.6 48 66.7
CSS0024346 Camellia sinensis var. sinensis HOM05D006711 ORTHO05D008104 1.1e-07 60.8 55 60.0
PGSC0003DMG400003004 Solanum tuberosum HOM05D006711 ORTHO05D008104 2.4e-07 59.7 48 62.5


User provided reference genes

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