Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g49554 Chara braunii HOM05D005308 ORTHO05D006494 0.0e+00 3342.0 2045 100.0
Pp3c20_21760 Physcomitrium patens HOM05D005308 ORTHO05D006494 8.0e-15 88.2 803 20.9
AagrBONN_evm.TU.Sc2ySwM_228.2792 Anthoceros agrestis HOM05D005308 ORTHO05D006494 9.8e-13 81.3 682 21.1
Mapoly0094s0054 Marchantia polymorpha HOM05D005308 ORTHO05D006494 9.8e-13 81.3 152 35.5
SMO361G0791 Selaginella moellendorffii HOM05D005308 ORTHO05D006494 2.2e-12 80.1 100 39.0
Pp3c10_23930 Physcomitrium patens HOM05D005308 ORTHO05D006494 1.2e-10 74.3 145 32.4
SEGI_39092 Sequoiadendron giganteum HOM05D005308 ORTHO05D006494 1.3e-09 70.9 100 41.0
MCO12G330 Micromonas commoda HOM05D005308 ORTHO05D006494 1.7e-09 70.5 242 27.3
QL02p007937 Quercus lobata HOM05D005308 ORTHO05D006494 8.5e-09 68.2 139 33.8
Carub.0002s2195 Capsella rubella HOM05D005308 ORTHO05D006494 1.9e-08 67.0 252 29.0
Aa31LG4G5330 Aethionema arabicum HOM05D005308 ORTHO05D006494 4.2e-08 65.9 142 30.3
Lsat_1_v5_gn_5_29021 Lactuca sativa HOM05D005308 ORTHO05D006494 4.2e-08 65.9 139 33.1
GSVIVG01009686001 Vitis vinifera HOM05D005308 ORTHO05D006494 4.2e-08 65.9 130 34.6
Duzib041G0136 Durio zibethinus HOM05D005308 ORTHO05D006494 5.5e-08 65.5 170 30.6
THA.LOC104806374 Tarenaya hassleriana HOM05D005308 ORTHO05D006494 5.5e-08 65.5 151 31.1
VMungo0647G0443 Vigna mungo HOM05D005308 ORTHO05D006494 7.2e-08 65.1 156 31.4
Glyma.17G249600 Glycine max HOM05D005308 ORTHO05D006494 9.5e-08 64.7 135 34.8
HanXRQChr05g0151851 Helianthus annuus HOM05D005308 ORTHO05D006494 1.6e-07 63.9 150 30.7
Phvul.001G015400 Phaseolus vulgaris HOM05D005308 ORTHO05D006494 2.8e-07 63.2 136 33.8
Carub.0001s1896 Capsella rubella HOM05D005308 ORTHO05D006494 3.6e-07 62.8 150 31.3
MD08G1033400 Malus domestica HOM05D005308 ORTHO05D006494 3.6e-07 62.8 159 30.2
ATR0829G103 Amborella trichopoda HOM05D005308 ORTHO05D006494 4.7e-07 62.4 106 34.9
CiPaw.15G075700 Carya illinoinensis HOM05D005308 ORTHO05D006494 4.7e-07 62.4 146 33.6
MD15G1030000 Malus domestica HOM05D005308 ORTHO05D006494 4.7e-07 62.4 152 30.9
Psat6g007480 Pisum sativum HOM05D005308 ORTHO05D006494 4.7e-07 62.4 147 33.3
Sc02g0006300 Simmondsia chinensis HOM05D005308 ORTHO05D006494 4.7e-07 62.4 137 32.1
vmacro04517 Vaccinium macrocarpon HOM05D005308 ORTHO05D006494 6.1e-07 62.0 101 37.6
CDE11G0691 Ceratophyllum demersum HOM05D005308 ORTHO05D006494 8.0e-07 61.6 150 30.0
Duzib116G0819 Durio zibethinus HOM05D005308 ORTHO05D006494 8.0e-07 61.6 160 30.6
Glyma.14G076200 Glycine max HOM05D005308 ORTHO05D006494 8.0e-07 61.6 145 33.1
Manes.05G161700 Manihot esculenta HOM05D005308 ORTHO05D006494 8.0e-07 61.6 153 30.1
Sp5g30270 Schrenkiella parvula HOM05D005308 ORTHO05D006494 8.0e-07 61.6 217 29.0
AT1G75140 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 1.0e-06 61.2 220 28.2
DCAR_020966 Daucus carota HOM05D005308 ORTHO05D006494 1.0e-06 61.2 142 28.9
Potri.002G262900 Populus trichocarpa HOM05D005308 ORTHO05D006494 1.0e-06 61.2 149 33.6
TWI73G1022 Tripterygium wilfordii HOM05D005308 ORTHO05D006494 1.0e-06 61.2 131 35.9
Aqoxy3G02057 Aquilegia oxysepala HOM05D005308 ORTHO05D006494 1.4e-06 60.8 124 32.3
BraA07t30544Z Brassica rapa HOM05D005308 ORTHO05D006494 1.4e-06 60.8 216 27.8
CARHR068470 Cardamine hirsuta HOM05D005308 ORTHO05D006494 1.4e-06 60.8 204 27.5
Rhsim07G0237100 Rhododendron simsii HOM05D005308 ORTHO05D006494 1.4e-06 60.8 103 36.9
CARHR019960 Cardamine hirsuta HOM05D005308 ORTHO05D006494 1.8e-06 60.5 116 33.6
PSO063G3485 Papaver somniferum HOM05D005308 ORTHO05D006494 1.8e-06 60.5 152 28.9
Gorai.009G203600 Gossypium raimondii HOM05D005308 ORTHO05D006494 2.3e-06 60.1 143 30.1
Sabra02G0199700 Salix brachista HOM05D005308 ORTHO05D006494 2.3e-06 60.1 149 32.2
TAR376G0813 Trochodendron aralioides HOM05D005308 ORTHO05D006494 2.3e-06 60.1 101 39.6
AL1G31960 Arabidopsis lyrata HOM05D005308 ORTHO05D006494 3.0e-06 59.7 151 31.1
DCAR_019524 Daucus carota HOM05D005308 ORTHO05D006494 3.0e-06 59.7 156 28.2
FAN27G1201 Fragaria x ananassa HOM05D005308 ORTHO05D006494 3.0e-06 59.7 142 30.3
Lalb_Chr22g0355491 Lupinus albus HOM05D005308 ORTHO05D006494 3.0e-06 59.7 125 32.8
PSO782G4716 Papaver somniferum HOM05D005308 ORTHO05D006494 3.0e-06 59.7 152 28.9
RcHm_v2.0_Chr6g0300791 Rosa chinensis HOM05D005308 ORTHO05D006494 3.0e-06 59.7 149 30.2
ClCG08G015210 Citrullus lanatus HOM05D005308 ORTHO05D006494 4.0e-06 59.3 102 35.3
ClCG08G015240 Citrullus lanatus HOM05D005308 ORTHO05D006494 4.0e-06 59.3 102 35.3
Gohir.D05G198500 Gossypium hirsutum HOM05D005308 ORTHO05D006494 4.0e-06 59.3 143 30.1
Medtr1g022045 Medicago truncatula HOM05D005308 ORTHO05D006494 4.0e-06 59.3 136 32.4
MSTRG.11457 Avicennia marina HOM05D005308 ORTHO05D006494 5.2e-06 58.9 168 31.5
BcaB02g06995 Brassica carinata HOM05D005308 ORTHO05D006494 5.2e-06 58.9 194 28.4
BcaB02g07002 Brassica carinata HOM05D005308 ORTHO05D006494 5.2e-06 58.9 188 29.3
C06p32820 Brassica napus HOM05D005308 ORTHO05D006494 5.2e-06 58.9 194 28.4
BolC6t38403H Brassica oleracea HOM05D005308 ORTHO05D006494 5.2e-06 58.9 194 28.4
Cfa018137 Carpinus fangiana HOM05D005308 ORTHO05D006494 5.2e-06 58.9 101 35.6
CsaV3_2G028560 Cucumis sativus L. HOM05D005308 ORTHO05D006494 5.2e-06 58.9 101 36.6
Sed0011840 Sechium edule HOM05D005308 ORTHO05D006494 5.2e-06 58.9 132 31.8
Sed0021548 Sechium edule HOM05D005308 ORTHO05D006494 5.2e-06 58.9 132 31.8
AT1G19370 Arabidopsis thaliana HOM05D005308 ORTHO05D006494 6.8e-06 58.5 151 30.5
AUR62032897 Chenopodium quinoa HOM05D005308 ORTHO05D006494 6.8e-06 58.5 144 29.9
COL.COLO4_26340 Corchorus olitorius HOM05D005308 ORTHO05D006494 6.8e-06 58.5 125 29.6
CsaV3_2G028600 Cucumis sativus L. HOM05D005308 ORTHO05D006494 8.8e-06 58.2 106 35.8
Migut.I00006 Erythranthe guttata HOM05D005308 ORTHO05D006494 8.8e-06 58.2 124 30.6


User provided reference genes

Program Settings