Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g49480 Chara braunii HOM05D005703 ORTHO05D006643 6.0e-141 504.2 262 100.0
Pp3c22_4620 Physcomitrium patens HOM05D005703 ORTHO05D006643 3.0e-39 166.4 246 39.0
SMO356G0671 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 9.5e-38 161.4 242 40.1
SMO290G0013 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 2.8e-37 159.8 242 39.7
SMO290G0004 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 3.6e-37 159.5 242 39.7
Actinidia27862 Actinidia chinensis HOM05D005703 ORTHO05D006643 2.3e-36 156.8 248 36.3
ATR0661G148 Amborella trichopoda HOM05D005703 ORTHO05D006643 4.0e-36 156.0 242 37.2
CiPaw.06G130900 Carya illinoinensis HOM05D005703 ORTHO05D006643 4.0e-36 156.0 247 35.2
Phvul.011G040900 Phaseolus vulgaris HOM05D005703 ORTHO05D006643 5.2e-36 155.6 248 35.1
SMO356G0278 Selaginella moellendorffii HOM05D005703 ORTHO05D006643 8.9e-36 154.8 240 38.3
Sc14g0002020 Simmondsia chinensis HOM05D005703 ORTHO05D006643 8.9e-36 154.8 246 36.2
Nn6g32200 Nelumbo nucifera HOM05D005703 ORTHO05D006643 1.5e-35 154.1 240 37.5
GSVIVG01024205001 Vitis vinifera HOM05D005703 ORTHO05D006643 2.6e-35 153.3 246 36.6
TWI31G0330 Tripterygium wilfordii HOM05D005703 ORTHO05D006643 3.4e-35 152.9 240 35.4
VMungo1127G0812 Vigna mungo HOM05D005703 ORTHO05D006643 3.4e-35 152.9 248 34.7
Atru.chr5.3109 Acer truncatum HOM05D005703 ORTHO05D006643 4.4e-35 152.5 244 36.1
CsaV3_7G000370 Cucumis sativus L. HOM05D005703 ORTHO05D006643 4.4e-35 152.5 240 36.2
CSS0001334 Camellia sinensis var. sinensis HOM05D005703 ORTHO05D006643 5.8e-35 152.1 248 34.3
Gohir.D12G030600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 7.5e-35 151.8 240 35.0
Gorai.008G031500 Gossypium raimondii HOM05D005703 ORTHO05D006643 7.5e-35 151.8 240 35.0
MD10G1066100 Malus domestica HOM05D005703 ORTHO05D006643 7.5e-35 151.8 241 36.1
Actinidia02238 Actinidia chinensis HOM05D005703 ORTHO05D006643 9.8e-35 151.4 250 36.4
Lalb_Chr03g0025421 Lupinus albus HOM05D005703 ORTHO05D006643 9.8e-35 151.4 248 34.3
Manes.11G087800 Manihot esculenta HOM05D005703 ORTHO05D006643 2.2e-34 150.2 247 35.2
Migut.B00193 Erythranthe guttata HOM05D005703 ORTHO05D006643 2.9e-34 149.8 242 37.2
Eucgr.D00178 Eucalyptus grandis HOM05D005703 ORTHO05D006643 2.9e-34 149.8 240 35.0
Glyma.11G112900 Glycine max HOM05D005703 ORTHO05D006643 2.9e-34 149.8 248 34.7
Glyma.12G038800 Glycine max HOM05D005703 ORTHO05D006643 2.9e-34 149.8 249 34.9
PSO170G4951 Papaver somniferum HOM05D005703 ORTHO05D006643 2.9e-34 149.8 254 36.6
arahy.Tifrunner.gnm1.ann1.YBLQ63 Arachis hypogaea HOM05D005703 ORTHO05D006643 3.7e-34 149.4 245 34.3
MELO3C002791.2 Cucumis melo HOM05D005703 ORTHO05D006643 3.7e-34 149.4 240 36.7
Cre08.g372000 Chlamydomonas reinhardtii HOM05D005703 ORTHO05D006643 6.4e-34 148.7 235 36.2
Thecc.02G078100 Theobroma cacao HOM05D005703 ORTHO05D006643 6.4e-34 148.7 240 34.6
Solyc01g110160.4 Solanum lycopersicum HOM05D005703 ORTHO05D006643 8.3e-34 148.3 240 35.8
Lj3g0017018 Lotus japonicus HOM05D005703 ORTHO05D006643 1.1e-33 147.9 240 35.8
QL11p045612 Quercus lobata HOM05D005703 ORTHO05D006643 1.1e-33 147.9 253 34.8
FvH4_2g10050 Fragaria vesca HOM05D005703 ORTHO05D006643 1.4e-33 147.5 241 36.1
Medtr4g071190 Medicago truncatula HOM05D005703 ORTHO05D006643 1.4e-33 147.5 240 35.4
Potri.004G160800 Populus trichocarpa HOM05D005703 ORTHO05D006643 1.4e-33 147.5 253 35.2
MSTRG.20056 Avicennia marina HOM05D005703 ORTHO05D006643 1.9e-33 147.1 242 36.0
COL.COLO4_26014 Corchorus olitorius HOM05D005703 ORTHO05D006643 1.9e-33 147.1 240 34.2
Sopen01g052320 Solanum pennellii HOM05D005703 ORTHO05D006643 1.9e-33 147.1 240 35.4
Hma1.2p1_0066F.1_g035910 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 2.4e-33 146.7 240 34.6
Os09g0531100 Oryza sativa ssp. japonica HOM05D005703 ORTHO05D006643 2.4e-33 146.7 240 37.1
Sabra04G0107600 Salix brachista HOM05D005703 ORTHO05D006643 4.1e-33 146.0 253 36.0
RcHm_v2.0_Chr6g0266981 Rosa chinensis HOM05D005703 ORTHO05D006643 7.1e-33 145.2 241 35.3
Cpa.g.sc150.43 Carica papaya HOM05D005703 ORTHO05D006643 1.2e-32 144.4 248 33.9
AUR62010417 Chenopodium quinoa HOM05D005703 ORTHO05D006643 1.2e-32 144.4 266 33.5
Peaxi162Scf00016g00231 Petunia axillaris HOM05D005703 ORTHO05D006643 1.2e-32 144.4 252 34.5
CARHR112270 Cardamine hirsuta HOM05D005703 ORTHO05D006643 2.1e-32 143.7 246 35.0
Rhsim05G0069500 Rhododendron simsii HOM05D005703 ORTHO05D006643 2.1e-32 143.7 244 34.4
Aqoxy5G01507 Aquilegia oxysepala HOM05D005703 ORTHO05D006643 3.5e-32 142.9 246 35.4
AUR62016798 Chenopodium quinoa HOM05D005703 ORTHO05D006643 3.5e-32 142.9 279 33.7
HPP92_025877 Vanilla planifolia HOM05D005703 ORTHO05D006643 4.6e-32 142.5 240 35.8
TPR.G16235 Trifolium pratense HOM05D005703 ORTHO05D006643 6.0e-32 142.1 249 32.5
Ca_20918_v3 Cicer arietinum L. HOM05D005703 ORTHO05D006643 7.8e-32 141.7 237 35.9
Prupe.8G088000 Prunus persica HOM05D005703 ORTHO05D006643 1.0e-31 141.4 247 34.4
AT2G21385 Arabidopsis thaliana HOM05D005703 ORTHO05D006643 1.3e-31 141.0 240 34.2
Zm00001eb353590 Zea mays HOM05D005703 ORTHO05D006643 1.3e-31 141.0 239 36.0
AL4G10560 Arabidopsis lyrata HOM05D005703 ORTHO05D006643 1.7e-31 140.6 246 34.1
Mapoly0084s0041 Marchantia polymorpha HOM05D005703 ORTHO05D006643 1.7e-31 140.6 244 36.9
THA.LOC104824803 Tarenaya hassleriana HOM05D005703 ORTHO05D006643 1.7e-31 140.6 240 32.9
Thhalv10000241m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 5.1e-31 139.0 245 33.1
Sp4g00560 Schrenkiella parvula HOM05D005703 ORTHO05D006643 5.1e-31 139.0 240 33.8
Ciclev10028680m.g Citrus clementina HOM05D005703 ORTHO05D006643 6.6e-31 138.7 291 31.3
ECA234G1754 Erigeron canadensis HOM05D005703 ORTHO05D006643 6.6e-31 138.7 239 33.5
Carub.0004s0043 Capsella rubella HOM05D005703 ORTHO05D006643 8.6e-31 138.3 242 34.3
Psat7g139960 Pisum sativum HOM05D005703 ORTHO05D006643 1.1e-30 137.9 248 33.1
PGSC0003DMG400030971 Solanum tuberosum HOM05D005703 ORTHO05D006643 1.5e-30 137.5 250 33.6
Aa31LG7G15130 Aethionema arabicum HOM05D005703 ORTHO05D001153 1.9e-30 137.1 240 33.3
HanXRQChr12g0373591 Helianthus annuus HOM05D005703 ORTHO05D006643 3.3e-30 136.3 247 32.4
A09p58290 Brassica napus HOM05D005703 ORTHO05D006643 8.1e-29 131.7 247 33.2
C08p41580 Brassica napus HOM05D005703 ORTHO05D006643 8.1e-29 131.7 247 33.2
BraA09t41216Z Brassica rapa HOM05D005703 ORTHO05D006643 1.4e-28 131.0 248 33.1
BolC8t51720H Brassica oleracea HOM05D005703 ORTHO05D006643 4.0e-28 129.4 248 32.7
Nitab4.5_0011132g0020 Nicotiana tabacum HOM05D005703 ORTHO05D006643 4.0e-28 129.4 249 33.3
CDE09G1081 Ceratophyllum demersum HOM05D005703 ORTHO05D006643 6.8e-28 128.6 278 31.3
Lsat_1_v5_gn_5_125081 Lactuca sativa HOM05D005703 ORTHO05D006643 5.8e-27 125.6 269 30.1
PRCOL_00000952 Prasinoderma coloniale HOM05D005703 ORTHO05D006643 5.8e-27 125.6 240 32.9
FAN15G0097 Fragaria x ananassa HOM05D005703 ORTHO05D006643 2.9e-26 123.2 294 29.3
arahy.Tifrunner.gnm1.ann1.R55P3J Arachis hypogaea HOM05D005703 ORTHO05D006643 4.9e-26 122.5 206 32.5
DCAR_022931 Daucus carota HOM05D005703 ORTHO05D006643 1.0e-23 114.8 215 35.3
CANSAT11G2682 Cannabis sativa HOM05D005703 ORTHO05D006643 5.1e-23 112.5 241 31.1
SalBow6G5125 Salvia bowleyana HOM05D005703 ORTHO05D006643 5.6e-22 109.0 222 32.9
AagrBONN_evm.TU.Sc2ySwM_228.378 Anthoceros agrestis HOM05D005703 ORTHO05D006643 3.6e-21 106.3 151 38.4
Sed0007704 Sechium edule HOM05D005703 ORTHO05D006643 6.2e-21 105.5 151 37.1
SGA_v2.0_scaffold58G20483 Striga asiatica HOM05D005703 ORTHO05D006643 6.2e-21 105.5 226 31.9
EL10Ac9g21670 Beta vulgaris HOM05D005703 ORTHO05D006643 1.4e-20 104.4 234 31.6
Dinv23475 Davidia involucrata HOM05D005703 ORTHO05D006643 1.4e-20 104.4 219 29.7
Gohir.A12G041600 Gossypium hirsutum HOM05D005703 ORTHO05D006643 1.4e-20 104.4 151 35.8
Cfa005074 Carpinus fangiana HOM05D005703 ORTHO05D006643 2.4e-20 103.6 151 37.1
Haze_02308 Corylus avellana HOM05D005703 ORTHO05D006643 2.4e-20 103.6 212 31.6
MELO3C013421.2 Cucumis melo HOM05D005703 ORTHO05D006643 4.0e-20 102.8 204 33.3
Hma1.2p1_0066F.1_g035920 Hydrangea macrophylla HOM05D005703 ORTHO05D006643 2.0e-19 100.5 208 30.8
ClCG02G004580 Citrullus lanatus HOM05D005703 ORTHO05D006643 1.3e-18 97.8 205 32.7
unitig_0.g54 Utricularia gibba HOM05D005703 ORTHO05D006643 1.3e-18 97.8 209 32.1
Nitab4.5_0002723g0090 Nicotiana tabacum HOM05D005703 ORTHO05D006643 1.1e-17 94.7 222 31.1
Hund00227 Selenicereus undatus HOM05D005703 ORTHO05D006643 1.9e-17 94.0 203 32.0
vmacro17444 Vaccinium macrocarpon HOM05D005703 ORTHO05D006643 7.8e-16 88.6 192 28.6
FAN27G2042 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.3e-15 87.8 219 29.2
FAN24G3327 Fragaria x ananassa HOM05D005703 ORTHO05D006643 1.7e-15 87.4 219 28.8
FAN20G2472 Fragaria x ananassa HOM05D005703 ORTHO05D006643 5.1e-15 85.9 219 28.3
Thhalv10005656m.g Eutrema salsugineum HOM05D005703 ORTHO05D006643 6.6e-15 85.5 121 34.7
Cc02_g17090 Coffea canephora HOM05D005703 ORTHO05D006643 8.7e-15 85.1 196 28.1
TAR381G0871 Trochodendron aralioides HOM05D005703 ORTHO05D006643 2.6e-11 73.6 118 36.4
BcaB06g27102 Brassica carinata HOM05D005703 ORTHO05D006643 9.9e-11 71.6 261 25.7
Lj5C191G8 Lonicera japonica HOM05D005703 ORTHO05D006643 8.4e-10 68.6 184 26.1
BraA01t01909Z Brassica rapa HOM05D005703 ORTHO05D006643 3.2e-09 66.6 206 29.1
BolC1t00937H Brassica oleracea HOM05D005703 ORTHO05D006643 2.3e-07 60.5 139 30.9
MCO02G267 Micromonas commoda HOM05D005703 ORTHO05D006643 2.3e-07 60.5 147 31.3
Duzib132G0736 Durio zibethinus HOM05D005703 ORTHO05D006643 2.5e-06 57.0 198 24.2
SEGI_33335 Sequoiadendron giganteum HOM05D005703 ORTHO05D006643 2.5e-06 57.0 88 34.1


User provided reference genes

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