Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48699 Chara braunii HOM05D006686 ORTHO05D008463 1.1e-122 443.4 238 100.0
Pp3c21_14930 Physcomitrium patens HOM05D006686 ORTHO05D008463 3.5e-23 112.8 81 63.0
Nitab4.5_0001129g0010 Nicotiana tabacum HOM05D006686 ORTHO05D008463 2.5e-21 106.7 79 58.2
SMO364G0094 Selaginella moellendorffii HOM05D006686 ORTHO05D008463 3.3e-21 106.3 85 57.6
Nitab4.5_0001057g0120 Nicotiana tabacum HOM05D006686 ORTHO05D008463 5.6e-21 105.5 79 57.0
CAN.G855.45 Capsicum annuum HOM05D006686 ORTHO05D008463 2.1e-20 103.6 90 51.1
PGSC0003DMG402024871 Solanum tuberosum HOM05D006686 ORTHO05D008463 3.6e-20 102.8 79 57.0
Solyc01g103110.3 Solanum lycopersicum HOM05D006686 ORTHO05D008463 6.2e-20 102.1 79 55.7
Sopen01g045530 Solanum pennellii HOM05D006686 ORTHO05D008463 6.2e-20 102.1 79 55.7
AagrBONN_evm.TU.Sc2ySwM_362.840 Anthoceros agrestis HOM05D006686 ORTHO05D008463 1.1e-19 101.3 85 54.1
Cpa.g.sc113.25 Carica papaya HOM05D006686 ORTHO05D008463 1.1e-19 101.3 80 55.0
Peaxi162Scf00011g01843 Petunia axillaris HOM05D006686 ORTHO05D008463 1.4e-19 100.9 80 56.2
Aqoxy5G01865 Aquilegia oxysepala HOM05D006686 ORTHO05D008463 1.8e-19 100.5 95 47.4
Eucgr.G00081 Eucalyptus grandis HOM05D006686 ORTHO05D008463 1.8e-19 100.5 92 54.3
Mapoly0007s0219 Marchantia polymorpha HOM05D006686 ORTHO05D008463 1.8e-19 100.5 90 52.2
Potri.004G228500 Populus trichocarpa HOM05D006686 ORTHO05D008463 2.4e-19 100.1 79 57.0
VMungo1215G3175 Vigna mungo HOM05D006686 ORTHO05D008463 4.0e-19 99.4 95 48.4
Migut.B00728 Erythranthe guttata HOM05D006686 ORTHO05D008463 5.3e-19 99.0 113 42.5
ATR1089G117 Amborella trichopoda HOM05D006686 ORTHO05D008463 9.0e-19 98.2 79 55.7
Prupe.1G584700 Prunus persica HOM05D006686 ORTHO05D008463 9.0e-19 98.2 79 57.0
Psat4g001080 Pisum sativum HOM05D006686 ORTHO05D008463 1.2e-18 97.8 82 53.7
unitig_22.g6102 Utricularia gibba HOM05D006686 ORTHO05D008463 2.0e-18 97.1 79 53.2
DCAR_022282 Daucus carota HOM05D006686 ORTHO05D008463 2.6e-18 96.7 98 44.9
HPP92_005637 Vanilla planifolia HOM05D006686 ORTHO05D008463 2.6e-18 96.7 81 55.6
Lj4g0021342 Lotus japonicus HOM05D006686 ORTHO05D008463 3.4e-18 96.3 79 55.7
MD08G1247400 Malus domestica HOM05D006686 ORTHO05D008463 3.4e-18 96.3 90 50.0
Phvul.003G075600 Phaseolus vulgaris HOM05D006686 ORTHO05D008463 3.4e-18 96.3 84 52.4
HPP92_005643 Vanilla planifolia HOM05D006686 ORTHO05D008463 3.4e-18 96.3 81 55.6
TWI59G1206 Tripterygium wilfordii HOM05D006686 ORTHO05D008463 4.5e-18 95.9 79 54.4
Ah.03g136810 Amaranthus hybridus HOM05D006686 ORTHO05D008463 5.8e-18 95.5 79 53.2
MSTRG.16472 Avicennia marina HOM05D006686 ORTHO05D008463 5.8e-18 95.5 79 50.6
Lj9C281G9 Lonicera japonica HOM05D006686 ORTHO05D008463 5.8e-18 95.5 79 54.4
Sabra01G0173400 Salix brachista HOM05D006686 ORTHO05D008463 5.8e-18 95.5 135 37.8
Cfa004450 Carpinus fangiana HOM05D006686 ORTHO05D008463 7.6e-18 95.1 79 55.7
ClCG10G007390 Citrullus lanatus HOM05D006686 ORTHO05D008463 7.6e-18 95.1 84 51.2
HanXRQChr01g0013991 Helianthus annuus HOM05D006686 ORTHO05D008463 7.6e-18 95.1 90 46.7
QL02p103152 Quercus lobata HOM05D006686 ORTHO05D008463 7.6e-18 95.1 91 48.4
SGA_v2.0_scaffold254G45251 Striga asiatica HOM05D006686 ORTHO05D008463 7.6e-18 95.1 96 45.8
CANSAT01G1449 Cannabis sativa HOM05D006686 ORTHO05D008463 9.9e-18 94.7 79 54.4
Nn5g27352 Nelumbo nucifera HOM05D006686 ORTHO05D008463 1.3e-17 94.4 79 53.2
EL10Ac6g14006 Beta vulgaris HOM05D006686 ORTHO05D008463 1.7e-17 94.0 79 54.4
FvH4_5g27990 Fragaria vesca HOM05D006686 ORTHO05D008463 1.7e-17 94.0 79 53.2
FAN04G2541 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.7e-17 94.0 117 44.4
FAN08G3117 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.7e-17 94.0 79 53.2
FAN18G1657 Fragaria x ananassa HOM05D006686 ORTHO05D008463 1.7e-17 94.0 79 53.2
Lsat_1_v5_gn_7_75180 Lactuca sativa HOM05D006686 ORTHO05D008463 1.7e-17 94.0 90 47.8
PGR042G1861 Punica granatum HOM05D006686 ORTHO05D008463 1.7e-17 94.0 84 53.6
Sc03g0004960 Simmondsia chinensis HOM05D006686 ORTHO05D008463 1.7e-17 94.0 79 57.0
CSS0008654 Camellia sinensis var. sinensis HOM05D006686 ORTHO05D008463 2.2e-17 93.6 79 53.2
Zm00001eb423040 Zea mays HOM05D006686 ORTHO05D008463 2.2e-17 93.6 79 50.6
COL.COLO4_26876 Corchorus olitorius HOM05D006686 ORTHO05D008463 2.9e-17 93.2 95 48.4
Gohir.D10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 2.9e-17 93.2 79 51.9
Gorai.011G003800 Gossypium raimondii HOM05D006686 ORTHO05D008463 2.9e-17 93.2 79 51.9
Sp6g11350 Schrenkiella parvula HOM05D006686 ORTHO05D008463 2.9e-17 93.2 86 48.8
BcaC01g04848 Brassica carinata HOM05D006686 ORTHO05D008463 4.9e-17 92.4 128 37.5
C03p33220 Brassica napus HOM05D006686 ORTHO05D008463 4.9e-17 92.4 128 37.5
BolC3t15644H Brassica oleracea HOM05D006686 ORTHO05D008463 4.9e-17 92.4 128 37.5
BraA03t11965Z Brassica rapa HOM05D006686 ORTHO05D008463 4.9e-17 92.4 131 35.9
ECA236G4971 Erigeron canadensis HOM05D006686 ORTHO05D008463 4.9e-17 92.4 79 51.9
TAR381G1724 Trochodendron aralioides HOM05D006686 ORTHO05D008463 4.9e-17 92.4 79 51.9
GSVIVG01023154001 Vitis vinifera HOM05D006686 ORTHO05D008463 4.9e-17 92.4 81 51.9
AUR62032459 Chenopodium quinoa HOM05D006686 ORTHO05D008463 6.4e-17 92.0 93 47.3
Ciclev10001220m.g Citrus clementina HOM05D006686 ORTHO05D008463 6.4e-17 92.0 78 55.1
Dinv29673 Davidia involucrata HOM05D006686 ORTHO05D008463 6.4e-17 92.0 79 51.9
Thecc.06G000500 Theobroma cacao HOM05D006686 ORTHO05D008463 6.4e-17 92.0 79 50.6
Atru.chr6.339 Acer truncatum HOM05D006686 ORTHO05D008463 8.4e-17 91.7 79 54.4
MELO3C016473.2 Cucumis melo HOM05D006686 ORTHO05D008463 8.4e-17 91.7 84 48.8
CsaV3_3G006630 Cucumis sativus L. HOM05D006686 ORTHO05D008463 8.4e-17 91.7 84 48.8
Thhalv10013635m.g Eutrema salsugineum HOM05D006686 ORTHO05D008463 8.4e-17 91.7 79 50.6
vmacro19835 Vaccinium macrocarpon HOM05D006686 ORTHO05D008463 8.4e-17 91.7 89 46.1
Manes.07G028500 Manihot esculenta HOM05D006686 ORTHO05D008463 1.1e-16 91.3 117 41.0
BcaB01g02944 Brassica carinata HOM05D006686 ORTHO05D008463 1.4e-16 90.9 130 36.2
CDE04G2622 Ceratophyllum demersum HOM05D006686 ORTHO05D008463 1.4e-16 90.9 179 35.8
RcHm_v2.0_Chr7g0220471 Rosa chinensis HOM05D006686 ORTHO05D008463 1.4e-16 90.9 77 54.5
Gohir.A10G003400 Gossypium hirsutum HOM05D006686 ORTHO05D008463 1.9e-16 90.5 79 49.4
Cc02_g23500 Coffea canephora HOM05D006686 ORTHO05D008463 2.4e-16 90.1 89 47.2
Duzib235G0699 Durio zibethinus HOM05D006686 ORTHO05D008463 2.4e-16 90.1 81 46.9
MBI03_g20875_MAGBIO Magnolia biondii HOM05D006686 ORTHO05D008463 4.2e-16 89.4 79 50.6
Actinidia01629 Actinidia chinensis HOM05D006686 ORTHO05D008463 5.4e-16 89.0 79 51.9
Aa31LG3G6890 Aethionema arabicum HOM05D006686 ORTHO05D008463 5.4e-16 89.0 95 42.1
Ca_13532_v3 Cicer arietinum L. HOM05D006686 ORTHO05D008463 7.1e-16 88.6 85 50.6
Os04g0442200 Oryza sativa ssp. japonica HOM05D006686 ORTHO05D008463 7.1e-16 88.6 79 48.1
Sp4g17050 Schrenkiella parvula HOM05D006686 ORTHO05D008463 9.3e-16 88.2 86 46.5
SEGI_40259 Sequoiadendron giganteum HOM05D006686 ORTHO05D008463 1.2e-15 87.8 79 45.6
Medtr4g134670 Medicago truncatula HOM05D006686 ORTHO05D008463 2.1e-15 87.0 80 53.8
THA.LOC104809035 Tarenaya hassleriana HOM05D006686 ORTHO05D008463 2.1e-15 87.0 79 50.6
arahy.Tifrunner.gnm1.ann1.A5H9W7 Arachis hypogaea HOM05D006686 ORTHO05D008463 3.5e-15 86.3 82 51.2
arahy.Tifrunner.gnm1.ann1.KKPS0T Arachis hypogaea HOM05D006686 ORTHO05D003399 3.5e-15 86.3 82 51.2
Rhsim05G0116000 Rhododendron simsii HOM05D006686 ORTHO05D008463 3.5e-15 86.3 89 44.9
Glyma.07G273000 Glycine max HOM05D006686 ORTHO05D008463 4.6e-15 85.9 117 43.6
PSO210G5299 Papaver somniferum HOM05D006686 ORTHO05D008463 4.6e-15 85.9 94 42.6
Carub.0004s0259 Capsella rubella HOM05D006686 ORTHO05D008463 6.0e-15 85.5 95 43.2
AT2G23390 Arabidopsis thaliana HOM05D006686 ORTHO05D008463 3.9e-14 82.8 130 34.6
AL4G13300 Arabidopsis lyrata HOM05D006686 ORTHO05D008463 8.7e-14 81.6 148 32.4
Lalb_Chr07g0176791 Lupinus albus HOM05D006686 ORTHO05D008463 1.1e-13 81.3 90 50.0
TPR.G5968 Trifolium pratense HOM05D006686 ORTHO05D008463 2.5e-13 80.1 74 55.4
A03p27520 Brassica napus HOM05D006686 ORTHO05D008463 3.7e-12 76.3 162 29.0
RcHm_v2.0_Chr7g0220181 Rosa chinensis HOM05D006686 ORTHO05D008463 6.9e-11 72.0 57 56.1
Haze_27211 Corylus avellana HOM05D006686 ORTHO05D008463 1.0e-09 68.2 73 47.9
Haze_09994 Corylus avellana HOM05D006686 ORTHO05D008463 6.4e-09 65.5 90 38.9
Sed0016336 Sechium edule HOM05D006686 ORTHO05D008463 8.4e-09 65.1 57 49.1
PSO447G0166 Papaver somniferum HOM05D006686 ORTHO05D008463 1.8e-06 57.4 67 40.3
CiPaw.06G176500 Carya illinoinensis HOM05D006686 ORTHO05D008463 3.9e-06 56.2 55 49.1


User provided reference genes

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