Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48696 Chara braunii HOM05D001568 ORTHO05D008804 6.3e-285 983.4 492 100.0
AagrBONN_evm.TU.Sc2ySwM_362.475 Anthoceros agrestis HOM05D001568 ORTHO05D008804 1.4e-69 268.1 245 56.3
Mapoly0081s0053 Marchantia polymorpha HOM05D001568 ORTHO05D008804 5.3e-66 256.1 246 52.8
Pp3c3_17050 Physcomitrium patens HOM05D001568 ORTHO05D008804 1.2e-65 255.0 244 54.1
Eucgr.I02493 Eucalyptus grandis HOM05D001568 ORTHO05D008804 1.3e-64 251.5 244 52.5
Cc00_g17990 Coffea canephora HOM05D001568 ORTHO05D008804 1.7e-64 251.1 260 49.2
CsaV3_7G007700 Cucumis sativus L. HOM05D001568 ORTHO05D008804 2.9e-64 250.4 262 50.8
MELO3C018530.2 Cucumis melo HOM05D001568 ORTHO05D008804 8.5e-64 248.8 262 50.4
FvH4_2g03440 Fragaria vesca HOM05D001568 ORTHO05D008804 1.5e-63 248.1 245 51.0
THA.LOC104826495 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 2.5e-63 247.3 257 49.4
THA.LOC104826496 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 3.2e-63 246.9 257 49.0
Ciclev10030269m.g Citrus clementina HOM05D001568 ORTHO05D008804 8.0e-62 242.3 263 47.1
TWI14G1141 Tripterygium wilfordii HOM05D001568 ORTHO05D008804 1.0e-61 241.9 263 47.1
PSO017G1092 Papaver somniferum HOM05D001568 ORTHO05D008804 1.4e-61 241.5 245 50.6
Os03g0729700 Oryza sativa ssp. japonica HOM05D001568 ORTHO05D008804 2.3e-61 240.7 249 49.4
DCAR_001738 Daucus carota HOM05D001568 ORTHO05D008804 3.9e-61 240.0 249 50.2
Prupe.8G149200 Prunus persica HOM05D001568 ORTHO05D008804 3.9e-61 240.0 257 48.6
Atru.chr5.2305 Acer truncatum HOM05D001568 ORTHO05D008804 6.7e-61 239.2 256 47.7
TAR628G1281 Trochodendron aralioides HOM05D001568 ORTHO05D008804 6.7e-61 239.2 265 47.2
Haze_10309 Corylus avellana HOM05D001568 ORTHO05D008804 8.8e-61 238.8 269 48.7
Solyc01g106880.3 Solanum lycopersicum HOM05D001568 ORTHO05D008804 8.8e-61 238.8 261 47.5
Gohir.A12G018701 Gossypium hirsutum HOM05D001568 ORTHO05D008804 1.1e-60 238.4 262 46.9
Gorai.008G019500 Gossypium raimondii HOM05D001568 ORTHO05D008804 1.1e-60 238.4 262 46.9
PSO170G6576 Papaver somniferum HOM05D001568 ORTHO05D008804 1.1e-60 238.4 245 50.2
HanXRQChr03g0072921 Helianthus annuus HOM05D001568 ORTHO05D008804 1.5e-60 238.0 245 49.8
CiPaw.05G020500 Carya illinoinensis HOM05D001568 ORTHO05D008804 2.0e-60 237.7 257 47.9
Manes.07G057400 Manihot esculenta HOM05D001568 ORTHO05D008804 2.0e-60 237.7 249 49.0
ECA240G3857 Erigeron canadensis HOM05D001568 ORTHO05D008804 3.3e-60 236.9 252 48.8
GSVIVG01037056001 Vitis vinifera HOM05D001568 ORTHO05D008804 3.3e-60 236.9 251 49.4
AT1G50000 Arabidopsis thaliana HOM05D001568 ORTHO05D008804 4.4e-60 236.5 260 47.3
Hma1.2p1_0661F.1_g198113 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 4.4e-60 236.5 265 46.0
Nn5g30645 Nelumbo nucifera HOM05D001568 ORTHO05D008804 4.4e-60 236.5 270 47.0
Sp1g36840 Schrenkiella parvula HOM05D001568 ORTHO05D008804 5.7e-60 236.1 262 47.7
SpUn0137_0040 Schrenkiella parvula HOM05D001568 ORTHO05D008804 5.7e-60 236.1 262 47.7
EL10Ac9g22185 Beta vulgaris HOM05D001568 ORTHO05D008804 7.4e-60 235.7 245 49.8
Sopen01g049160 Solanum pennellii HOM05D001568 ORTHO05D008804 9.7e-60 235.3 261 47.1
Thecc.02G119500 Theobroma cacao HOM05D001568 ORTHO05D008804 1.3e-59 235.0 266 47.0
AL1G57570 Arabidopsis lyrata HOM05D001568 ORTHO05D008804 1.7e-59 234.6 260 47.3
Migut.B00460 Erythranthe guttata HOM05D001568 ORTHO05D008804 1.7e-59 234.6 250 49.6
Nitab4.5_0001099g0070 Nicotiana tabacum HOM05D001568 ORTHO05D008804 1.7e-59 234.6 272 45.6
BcaB07g33452 Brassica carinata HOM05D001568 ORTHO05D008804 2.8e-59 233.8 251 47.4
Rhsim05G0092700 Rhododendron simsii HOM05D001568 ORTHO05D008804 3.7e-59 233.4 257 47.9
HPP92_026588 Vanilla planifolia HOM05D001568 ORTHO05D008804 4.8e-59 233.0 249 50.2
RcHm_v2.0_Chr6g0248601 Rosa chinensis HOM05D001568 ORTHO05D008804 6.3e-59 232.6 275 45.8
Aqoxy1G00265 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 1.1e-58 231.9 247 51.8
Potri.001G290100 Populus trichocarpa HOM05D001568 ORTHO05D008804 1.4e-58 231.5 257 47.1
Actinidia04394 Actinidia chinensis HOM05D001568 ORTHO05D008804 5.3e-58 229.6 263 47.1
CDE04G1257 Ceratophyllum demersum HOM05D001568 ORTHO05D008804 5.3e-58 229.6 258 46.1
FAN15G2988 Fragaria x ananassa HOM05D001568 ORTHO05D008804 5.3e-58 229.6 240 48.8
SalBow6G4520 Salvia bowleyana HOM05D001568 ORTHO05D008804 5.3e-58 229.6 294 44.9
Carub.0151s0002 Capsella rubella HOM05D001568 ORTHO05D008804 1.2e-57 228.4 264 45.8
CANSAT25G3386 Cannabis sativa HOM05D001568 ORTHO05D008804 2.0e-57 227.6 264 46.6
Nitab4.5_0010145g0020 Nicotiana tabacum HOM05D001568 ORTHO05D008804 2.0e-57 227.6 277 44.4
ATR0739G203 Amborella trichopoda HOM05D001568 ORTHO05D008804 2.6e-57 227.3 255 48.2
SGA_v2.0_scaffold225G43060 Striga asiatica HOM05D001568 ORTHO05D008804 4.5e-57 226.5 303 44.6
ClCG02G007120 Citrullus lanatus HOM05D001568 ORTHO05D008804 7.7e-57 225.7 272 47.4
unitig_744.g24207 Utricularia gibba HOM05D001568 ORTHO05D008804 7.7e-57 225.7 245 48.2
Lalb_Chr06g0165001 Lupinus albus HOM05D001568 ORTHO05D008804 3.8e-56 223.4 246 47.6
BcaC08g43178 Brassica carinata HOM05D001568 ORTHO05D008804 6.5e-56 222.6 268 44.4
VMungo0720G2114 Vigna mungo HOM05D001568 ORTHO05D008804 8.5e-56 222.2 246 47.2
TPR.G21139 Trifolium pratense HOM05D001568 ORTHO05D008804 1.1e-55 221.9 259 44.4
CAN.G606.69 Capsicum annuum HOM05D001568 ORTHO05D008804 1.5e-55 221.5 290 42.4
Cfa004705 Carpinus fangiana HOM05D001568 ORTHO05D008804 1.9e-55 221.1 235 49.4
Cfa004706 Carpinus fangiana HOM05D001568 ORTHO05D008804 4.2e-55 219.9 236 50.0
MBI16_g16470_MAGBIO Magnolia biondii HOM05D001568 ORTHO05D008804 7.2e-55 219.2 230 49.6
CSS0011887 Camellia sinensis var. sinensis HOM05D001568 ORTHO05D008804 1.6e-54 218.0 257 45.9
MD10G1109100 Malus domestica HOM05D001568 ORTHO05D008804 2.7e-54 217.2 231 49.8
BolC6t35607H Brassica oleracea HOM05D001568 ORTHO05D008804 3.6e-54 216.9 268 44.4
COL.COLO4_32489 Corchorus olitorius HOM05D001568 ORTHO05D008804 4.7e-54 216.5 266 44.4
SMO358G0428 Selaginella moellendorffii HOM05D001568 ORTHO05D008804 4.7e-54 216.5 246 47.2
A06p03430 Brassica napus HOM05D001568 ORTHO05D008804 6.1e-54 216.1 266 44.0
BraA06t23551Z Brassica rapa HOM05D001568 ORTHO05D008804 6.1e-54 216.1 269 43.5
Glyma.20G135600 Glycine max HOM05D001568 ORTHO05D008804 8.0e-54 215.7 249 44.6
Lj1g0020001 Lotus japonicus HOM05D001568 ORTHO05D008804 8.0e-54 215.7 246 46.7
Medtr1g106055 Medicago truncatula HOM05D001568 ORTHO05D008804 1.0e-53 215.3 249 44.6
C06p04780 Brassica napus HOM05D001568 ORTHO05D008804 1.4e-53 214.9 269 44.2
Sc14g0002500 Simmondsia chinensis HOM05D001568 ORTHO05D008804 1.8e-53 214.5 253 48.2
Lsat_1_v5_gn_9_113380 Lactuca sativa HOM05D001568 ORTHO05D008804 8.8e-53 212.2 264 44.3
Ca_11027_v3 Cicer arietinum L. HOM05D001568 ORTHO05D008804 1.5e-52 211.5 268 42.2
Gohir.D12G019200 Gossypium hirsutum HOM05D001568 ORTHO05D008804 2.6e-52 210.7 269 44.2
QL11p029473 Quercus lobata HOM05D001568 ORTHO05D008804 2.6e-52 210.7 326 39.0
Lj9A337T44 Lonicera japonica HOM05D001568 ORTHO05D008804 5.7e-52 209.5 231 46.8
arahy.Tifrunner.gnm1.ann1.804FU2 Arachis hypogaea HOM05D001568 ORTHO05D008804 7.5e-52 209.1 232 47.0
Thhalv10011739m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.7e-51 208.0 230 46.1
arahy.Tifrunner.gnm1.ann1.ESII2D Arachis hypogaea HOM05D001568 ORTHO05D008804 3.7e-51 206.8 231 45.9
Dinv09541 Davidia involucrata HOM05D001568 ORTHO05D008804 1.8e-50 204.5 251 44.2
Peaxi162Scf00016g03020 Petunia axillaris HOM05D001568 ORTHO05D008804 2.7e-49 200.7 267 43.4
AUR62027019 Chenopodium quinoa HOM05D001568 ORTHO05D008804 2.9e-48 197.2 217 49.8
PGR142G1084 Punica granatum HOM05D001568 ORTHO05D008804 4.2e-47 193.4 205 50.2
CARHR040100 Cardamine hirsuta HOM05D001568 ORTHO05D008804 1.6e-46 191.4 217 46.1
AUR62030859 Chenopodium quinoa HOM05D001568 ORTHO05D008804 5.2e-45 186.4 205 49.3
Aa31LG10G4130 Aethionema arabicum HOM05D001568 ORTHO05D008804 1.5e-44 184.9 205 47.3
Hma1.2p1_0661F.1_g198116 Hydrangea macrophylla HOM05D001568 ORTHO05D008804 4.4e-44 183.3 205 47.3
vmacro22256 Vaccinium macrocarpon HOM05D001568 ORTHO05D009161 1.4e-42 178.3 266 41.7
Phvul.007G046900 Phaseolus vulgaris HOM05D001568 ORTHO05D008804 1.8e-42 177.9 202 45.0
MCO02G312 Micromonas commoda HOM05D001568 ORTHO05D008804 2.0e-41 174.5 185 51.9
Ah.01g007040 Amaranthus hybridus HOM05D001568 ORTHO05D008804 1.3e-40 171.8 186 47.8
THA.LOC104809178 Tarenaya hassleriana HOM05D001568 ORTHO05D008804 1.7e-40 171.4 166 53.6
Sed0001597 Sechium edule HOM05D001568 ORTHO05D008804 2.9e-40 170.6 257 40.5
Psat6g214440 Pisum sativum HOM05D001568 ORTHO05D008804 2.6e-36 157.5 158 46.8
PRCOL_00000434 Prasinoderma coloniale HOM05D001568 ORTHO05D008804 5.4e-34 149.8 299 38.8
Sabra16G0181700 Salix brachista HOM05D001568 ORTHO05D008804 5.9e-33 146.4 223 41.3
FAN24G1144 Fragaria x ananassa HOM05D001568 ORTHO05D008804 1.0e-32 145.6 194 41.2
Cre03.g175800 Chlamydomonas reinhardtii HOM05D001568 ORTHO05D008804 2.7e-25 120.9 337 31.5
Aqoxy335s004 Aquilegia oxysepala HOM05D001568 ORTHO05D008804 4.6e-25 120.2 126 50.0
TAR376G0809 Trochodendron aralioides HOM05D001568 ORTHO05D008804 1.1e-21 109.0 142 46.5
FAN24G0164 Fragaria x ananassa HOM05D001568 ORTHO05D008804 2.4e-18 97.8 112 47.3
Manes.10G086502 Manihot esculenta HOM05D001568 ORTHO05D008804 3.9e-16 90.5 226 28.8
MSTRG.20236 Avicennia marina HOM05D001568 ORTHO05D008804 2.3e-13 81.3 100 50.0
Ca_28940_v3 Cicer arietinum L. HOM05D001568 ORTHO05D148655 5.8e-12 76.6 235 28.5
Thhalv10012254m.g Eutrema salsugineum HOM05D001568 ORTHO05D008804 1.2e-09 68.9 100 38.0


User provided reference genes

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