Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4867 Chara braunii HOM05D005159 ORTHO05D006237 1.6e-82 309.7 199 100.0
CBR_g52693 Chara braunii HOM05D005159 ORTHO05D006237 4.1e-41 172.2 199 55.3
Pp3c10_24110 Physcomitrium patens HOM05D005159 ORTHO05D006237 4.0e-28 129.0 139 49.6
Ca_13657_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 1.3e-23 114.0 138 44.9
Cc08_g12050 Coffea canephora HOM05D005159 ORTHO05D006237 1.7e-23 113.6 136 47.1
Sc10g0001500 Simmondsia chinensis HOM05D005159 ORTHO05D006237 2.3e-23 113.2 136 45.6
ClCG11G001130 Citrullus lanatus HOM05D005159 ORTHO05D006237 2.9e-23 112.8 159 43.4
Nn1g09575 Nelumbo nucifera HOM05D005159 ORTHO05D006237 5.0e-23 112.1 156 43.6
Sed0002827 Sechium edule HOM05D005159 ORTHO05D006237 5.0e-23 112.1 136 47.1
Ciclev10012260m.g Citrus clementina HOM05D005159 ORTHO05D006237 8.6e-23 111.3 136 47.1
MD09G1079700 Malus domestica HOM05D005159 ORTHO05D006237 8.6e-23 111.3 141 45.4
Manes.01G106500 Manihot esculenta HOM05D005159 ORTHO05D006237 8.6e-23 111.3 140 47.1
Medtr8g085800 Medicago truncatula HOM05D005159 ORTHO05D006237 8.6e-23 111.3 137 45.3
MD17G1070200 Malus domestica HOM05D005159 ORTHO05D006237 1.1e-22 110.9 141 45.4
RcHm_v2.0_Chr2g0163971 Rosa chinensis HOM05D005159 ORTHO05D006237 1.1e-22 110.9 138 43.5
SMO196G0176 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 1.1e-22 110.9 154 40.9
CsaV3_5G013180 Cucumis sativus L. HOM05D005159 ORTHO05D006237 1.5e-22 110.5 140 44.3
FvH4_6g45790 Fragaria vesca HOM05D005159 ORTHO05D006237 1.5e-22 110.5 135 43.7
FAN02G2008 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.5e-22 110.5 135 43.7
FAN09G0042 Fragaria x ananassa HOM05D005159 ORTHO05D006237 1.5e-22 110.5 135 43.7
CAN.G497.25 Capsicum annuum HOM05D005159 ORTHO05D006237 2.5e-22 109.8 136 44.1
Medtr4g051625 Medicago truncatula HOM05D005159 ORTHO05D006237 2.5e-22 109.8 137 46.0
Glyma.07G204700 Glycine max HOM05D005159 ORTHO05D006237 3.3e-22 109.4 136 44.1
Potri.017G108700 Populus trichocarpa HOM05D005159 ORTHO05D006237 3.3e-22 109.4 136 47.8
Prupe.3G244000 Prunus persica HOM05D005159 ORTHO05D006237 3.3e-22 109.4 136 45.6
Solyc03g046350.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 3.3e-22 109.4 136 44.9
THA.LOC104805544 Tarenaya hassleriana HOM05D005159 ORTHO05D006237 3.3e-22 109.4 137 46.0
Actinidia18107 Actinidia chinensis HOM05D005159 ORTHO05D006237 4.3e-22 109.0 136 44.1
Sabra04G0075100 Salix brachista HOM05D005159 ORTHO05D006237 4.3e-22 109.0 136 47.8
TWI32G0838 Tripterygium wilfordii HOM05D005159 ORTHO05D006237 4.3e-22 109.0 141 44.7
Actinidia36292 Actinidia chinensis HOM05D005159 ORTHO05D006237 5.6e-22 108.6 133 45.1
Sopen03g009860 Solanum pennellii HOM05D005159 ORTHO05D006237 5.6e-22 108.6 136 44.9
PGSC0003DMG400018775 Solanum tuberosum HOM05D005159 ORTHO05D006237 5.6e-22 108.6 136 44.9
Cpa.g.sc70.15 Carica papaya HOM05D005159 ORTHO05D006237 7.3e-22 108.2 136 47.1
MELO3C020033.2 Cucumis melo HOM05D005159 ORTHO05D006237 7.3e-22 108.2 140 43.6
Dinv33896 Davidia involucrata HOM05D005159 ORTHO05D006237 7.3e-22 108.2 136 44.1
QL02p054338 Quercus lobata HOM05D005159 ORTHO05D006237 9.5e-22 107.8 133 47.4
PGSC0003DMG400010100 Solanum tuberosum HOM05D005159 ORTHO05D006237 9.5e-22 107.8 136 44.1
unitig_61.g26382 Utricularia gibba HOM05D005159 ORTHO05D006237 9.5e-22 107.8 140 43.6
GSVIVG01036491001 Vitis vinifera HOM05D005159 ORTHO05D006237 9.5e-22 107.8 136 44.9
Atru.chr11.1725 Acer truncatum HOM05D005159 ORTHO05D006237 1.2e-21 107.5 133 47.4
Ah.15g094970 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.2e-21 107.5 136 43.4
Lju237A1T66 Lonicera japonica HOM05D005159 ORTHO05D006237 1.2e-21 107.5 136 43.4
Peaxi162Scf00479g00439 Petunia axillaris HOM05D005159 ORTHO05D006237 1.2e-21 107.5 136 43.4
Sed0024356 Sechium edule HOM05D005159 ORTHO05D006237 1.2e-21 107.5 136 44.9
Aa31LG9G16930 Aethionema arabicum HOM05D005159 ORTHO05D006237 1.6e-21 107.1 141 44.7
Solyc02g089600.3 Solanum lycopersicum HOM05D005159 ORTHO05D006237 1.6e-21 107.1 136 44.1
Eucgr.I02096 Eucalyptus grandis HOM05D005159 ORTHO05D006237 2.8e-21 106.3 198 36.4
FAN05G5180 Fragaria x ananassa HOM05D005159 ORTHO05D006237 2.8e-21 106.3 151 39.7
Nitab4.5_0001982g0030 Nicotiana tabacum HOM05D005159 ORTHO05D006237 2.8e-21 106.3 136 43.4
PSO478G0642 Papaver somniferum HOM05D005159 ORTHO05D006237 3.6e-21 105.9 136 46.3
Peaxi162Scf01056g00019 Petunia axillaris HOM05D005159 ORTHO05D006237 3.6e-21 105.9 136 44.1
arahy.Tifrunner.gnm1.ann1.MEN3PN Arachis hypogaea HOM05D005159 ORTHO05D006237 4.7e-21 105.5 136 41.9
Psat6g166480 Pisum sativum HOM05D005159 ORTHO05D006237 4.7e-21 105.5 139 43.2
CDE01G0131 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 6.1e-21 105.1 136 43.4
AUR62016605 Chenopodium quinoa HOM05D005159 ORTHO05D006237 6.1e-21 105.1 136 41.9
Mapoly0058s0026 Marchantia polymorpha HOM05D005159 ORTHO05D006237 6.1e-21 105.1 131 43.5
Oeu062202.1 Olea europaea HOM05D005159 ORTHO05D006237 6.1e-21 105.1 140 42.1
Phvul.008G006700 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 6.1e-21 105.1 136 43.4
Potri.004G106900 Populus trichocarpa HOM05D005159 ORTHO05D006237 6.1e-21 105.1 136 46.3
Migut.K00872 Erythranthe guttata HOM05D005159 ORTHO05D006237 8.0e-21 104.8 136 42.6
SEGI_21798 Sequoiadendron giganteum HOM05D005159 ORTHO05D006237 8.0e-21 104.8 133 45.9
Ah.08g217340 Amaranthus hybridus HOM05D005159 ORTHO05D006237 1.0e-20 104.4 136 41.9
Thecc.04G145900 Theobroma cacao HOM05D005159 ORTHO05D006237 1.0e-20 104.4 135 44.4
MSTRG.15424 Avicennia marina HOM05D005159 ORTHO05D006237 1.4e-20 104.0 136 41.2
Glyma.13G171200 Glycine max HOM05D005159 ORTHO05D006237 1.4e-20 104.0 135 42.2
PGR004G1892 Punica granatum HOM05D005159 ORTHO05D006237 1.4e-20 104.0 140 41.4
Aqoxy3G00614 Aquilegia oxysepala HOM05D005159 ORTHO05D006237 1.8e-20 103.6 136 50.7
CiPaw.03G007500 Carya illinoinensis HOM05D005159 ORTHO05D006237 1.8e-20 103.6 133 42.9
Gohir.A13G118100 Gossypium hirsutum HOM05D005159 ORTHO05D006237 1.8e-20 103.6 135 43.7
Nitab4.5_0006224g0050 Nicotiana tabacum HOM05D005159 ORTHO05D006237 1.8e-20 103.6 136 42.6
PSO017G6426 Papaver somniferum HOM05D005159 ORTHO05D006237 2.3e-20 103.2 136 43.4
EL10Ac7g16490 Beta vulgaris HOM05D005159 ORTHO05D006237 3.0e-20 102.8 136 41.2
Duzib211G0079 Durio zibethinus HOM05D005159 ORTHO05D006237 3.0e-20 102.8 135 42.2
Gorai.013G136600 Gossypium raimondii HOM05D005159 ORTHO05D006237 3.0e-20 102.8 135 43.7
SGA_v2.0_scaffold10G05141 Striga asiatica HOM05D005159 ORTHO05D006237 3.0e-20 102.8 136 41.2
Hund27686 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.0e-20 102.4 198 33.8
Hund27687 Selenicereus undatus HOM05D005159 ORTHO05D006237 4.0e-20 102.4 198 33.8
arahy.Tifrunner.gnm1.ann1.VE7QKQ Arachis hypogaea HOM05D005159 ORTHO05D006237 5.2e-20 102.1 136 46.3
CANSAT21G0179 Cannabis sativa HOM05D005159 ORTHO05D006237 5.2e-20 102.1 136 42.6
MCO13G254 Micromonas commoda HOM05D005159 ORTHO05D006237 6.8e-20 101.7 138 43.5
HPP92_015315 Vanilla planifolia HOM05D005159 ORTHO05D006237 6.8e-20 101.7 167 42.5
Ca_26327_v3 Cicer arietinum L. HOM05D005159 ORTHO05D006237 8.9e-20 101.3 137 42.3
Gohir.D13G121900 Gossypium hirsutum HOM05D005159 ORTHO05D006237 8.9e-20 101.3 135 43.0
CDE02G0002 Ceratophyllum demersum HOM05D005159 ORTHO05D006237 1.2e-19 100.9 135 42.2
Os02g0728700 Oryza sativa ssp. japonica HOM05D005159 ORTHO05D006237 1.2e-19 100.9 160 48.8
SalBow1G7987 Salvia bowleyana HOM05D005159 ORTHO05D006237 1.5e-19 100.5 136 40.4
MBI15_g18197_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 2.0e-19 100.1 136 41.9
DCAR_026285 Daucus carota HOM05D005159 ORTHO05D006237 4.4e-19 99.0 159 37.1
TPR.G37714 Trifolium pratense HOM05D005159 ORTHO05D006237 4.4e-19 99.0 138 43.5
Thhalv10028147m.g Eutrema salsugineum HOM05D005159 ORTHO05D006237 7.5e-19 98.2 137 45.3
BcaB06g27239 Brassica carinata HOM05D005159 ORTHO05D006237 9.8e-19 97.8 137 42.3
BcaC02g09665 Brassica carinata HOM05D005159 ORTHO05D006237 9.8e-19 97.8 137 42.3
C04p45340 Brassica napus HOM05D005159 ORTHO05D006237 9.8e-19 97.8 137 42.3
BolC4t26116H Brassica oleracea HOM05D005159 ORTHO05D006237 9.8e-19 97.8 137 42.3
BraA04t16828Z Brassica rapa HOM05D005159 ORTHO05D006237 9.8e-19 97.8 137 42.3
A04p11610 Brassica napus HOM05D005159 ORTHO05D006237 3.7e-18 95.9 137 41.6
AUR62026768 Chenopodium quinoa HOM05D005159 ORTHO05D006237 3.7e-18 95.9 135 39.3
Sp7g03200 Schrenkiella parvula HOM05D005159 ORTHO05D006237 4.9e-18 95.5 137 41.6
C06p18340 Brassica napus HOM05D005159 ORTHO05D006237 6.4e-18 95.1 137 42.3
BolC6t37046H Brassica oleracea HOM05D005159 ORTHO05D006237 6.4e-18 95.1 137 42.3
ECA240G3626 Erigeron canadensis HOM05D005159 ORTHO05D006237 8.3e-18 94.7 141 39.7
Lalb_Chr18g0059201 Lupinus albus HOM05D005159 ORTHO05D006237 1.1e-17 94.4 136 49.3
AT5G38720 Arabidopsis thaliana HOM05D005159 ORTHO05D006237 1.8e-17 93.6 137 40.9
Carub.0007s3714 Capsella rubella HOM05D005159 ORTHO05D006237 1.8e-17 93.6 137 39.4
Psat7g186040 Pisum sativum HOM05D002527 ORTHO05D002865 2.4e-17 93.2 123 43.1
Zm00001eb253420 Zea mays HOM05D005159 ORTHO05D006237 2.4e-17 93.2 137 51.8
Medtr1g090650 Medicago truncatula HOM05D005159 ORTHO05D006237 3.2e-17 92.8 138 39.9
HanXRQChr03g0078031 Helianthus annuus HOM05D005159 ORTHO05D006237 4.1e-17 92.4 157 36.3
Lsat_1_v5_gn_8_24161 Lactuca sativa HOM05D005159 ORTHO05D006237 4.1e-17 92.4 159 35.8
AUR62011452 Chenopodium quinoa HOM05D005159 ORTHO05D006237 7.0e-17 91.7 172 33.1
MBI15_g38433_MAGBIO Magnolia biondii HOM05D005159 ORTHO05D006237 9.2e-17 91.3 137 38.7
ATR0691G244 Amborella trichopoda HOM05D005159 ORTHO05D006237 1.2e-16 90.9 136 45.6
Rhsim08G0081100 Rhododendron simsii HOM05D005159 ORTHO05D006237 1.2e-16 90.9 138 48.6
vmacro18090 Vaccinium macrocarpon HOM05D005159 ORTHO05D006237 2.7e-16 89.7 142 47.2
VMungo1383G3720 Vigna mungo HOM05D005159 ORTHO05D006237 2.7e-16 89.7 136 46.3
BcaC08g44401 Brassica carinata HOM05D005159 ORTHO05D006237 3.5e-16 89.4 136 40.4
Sopen02g034320 Solanum pennellii HOM05D005159 ORTHO05D006237 3.5e-16 89.4 136 47.1
Phvul.001G061500 Phaseolus vulgaris HOM05D005159 ORTHO05D006237 4.6e-16 89.0 188 39.9
SMO234G0023 Selaginella moellendorffii HOM05D005159 ORTHO05D006237 5.9e-16 88.6 107 43.0
Lj6g0020881 Lotus japonicus HOM05D005159 ORTHO05D006237 1.3e-15 87.4 136 45.6
Nn8g41096 Nelumbo nucifera HOM05D005159 ORTHO05D006237 3.0e-15 86.3 135 47.4
AL7G51700 Arabidopsis lyrata HOM05D005159 ORTHO05D006237 5.0e-15 85.5 205 32.2
arahy.Tifrunner.gnm1.ann1.3J3UL0 Arachis hypogaea HOM05D005159 ORTHO05D006237 2.5e-14 83.2 136 36.0
FAN14G1445 Fragaria x ananassa HOM05D005159 ORTHO05D006237 3.3e-14 82.8 88 48.9
CARHR291790 Cardamine hirsuta HOM05D005159 ORTHO05D006237 6.2e-13 78.6 138 36.2
TAR371G0967 Trochodendron aralioides HOM05D005159 ORTHO05D006237 8.9e-12 74.7 107 42.1
CSS0013880 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.5e-11 73.9 107 40.2
TPR.G28602 Trifolium pratense HOM05D005159 ORTHO05D006237 2.0e-11 73.6 127 37.8
COL.COLO4_37042 Corchorus olitorius HOM05D005159 ORTHO05D006237 2.6e-11 73.2 114 35.1
TAR629G0318 Trochodendron aralioides HOM05D005159 ORTHO05D006237 9.8e-11 71.2 112 39.3
CSS0007706 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.3e-10 70.9 107 39.3
CSS0044288 Camellia sinensis var. sinensis HOM05D005159 ORTHO05D006237 1.3e-10 70.9 107 39.3
Cre01.g052200 Chlamydomonas reinhardtii HOM05D005159 ORTHO05D006237 3.2e-09 66.2 140 34.3
PRCOL_00005361 Prasinoderma coloniale HOM05D005159 ORTHO05D006237 3.2e-09 66.2 144 38.9
Medtr8g085830 Medicago truncatula HOM05D005159 ORTHO05D006237 4.6e-08 62.4 42 69.0
Haze_14082 Corylus avellana HOM05D005159 ORTHO05D006237 7.8e-08 61.6 105 38.1
AagrBONN_evm.TU.Sc2ySwM_369.363 Anthoceros agrestis HOM05D005159 ORTHO05D006237 1.0e-07 61.2 109 35.8
Lj7A7T32 Lonicera japonica HOM05D005159 ORTHO05D006237 2.3e-07 60.1 87 35.6
TAR629G0746 Trochodendron aralioides HOM05D005159 ORTHO05D006237 8.6e-07 58.2 106 34.9


User provided reference genes

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