Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4862 Chara braunii HOM05D006302 ORTHO05D007960 0.0e+00 3197.5 1745 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1719 Anthoceros agrestis HOM05D006302 ORTHO05D007960 1.8e-177 628.2 1252 34.5
Mapoly0172s0015 Marchantia polymorpha HOM05D006302 ORTHO05D007960 9.4e-174 615.9 1042 36.5
Pp3c9_1610 Physcomitrium patens HOM05D006302 ORTHO05D007960 7.7e-168 596.3 1239 34.2
Pp3c9_1614 Physcomitrium patens HOM05D006302 ORTHO05D007960 8.2e-162 576.2 1226 33.8
SEGI_33145 Sequoiadendron giganteum HOM05D006302 ORTHO05D007960 5.4e-153 547.0 1230 32.0
SMO340G0100 Selaginella moellendorffii HOM05D006302 ORTHO05D007960 2.7e-152 544.7 1223 30.9
GSVIVG01012939001 Vitis vinifera HOM05D006302 ORTHO05D007960 5.4e-145 520.4 1232 32.5
Potri.015G033300 Populus trichocarpa HOM05D006302 ORTHO05D007960 1.2e-144 519.2 1220 31.2
TWI81G1078 Tripterygium wilfordii HOM05D006302 ORTHO05D007960 1.2e-144 519.2 1227 30.8
Dinv19314 Davidia involucrata HOM05D006302 ORTHO05D007960 3.5e-144 517.7 1236 31.3
TAR629G0371 Trochodendron aralioides HOM05D006302 ORTHO05D007960 5.9e-144 516.9 1218 30.8
FAN13G0246 Fragaria x ananassa HOM05D006302 ORTHO05D007960 1.7e-143 515.4 1229 30.8
RcHm_v2.0_Chr7g0177661 Rosa chinensis HOM05D006302 ORTHO05D007960 2.3e-143 515.0 1231 30.8
CiPaw.15G150000 Carya illinoinensis HOM05D006302 ORTHO05D007960 2.9e-143 514.6 1229 31.2
FAN04G1871 Fragaria x ananassa HOM05D006302 ORTHO05D007960 3.8e-143 514.2 1225 31.3
Glyma.16G219200 Glycine max HOM05D006302 ORTHO05D007960 7.3e-142 510.0 1228 29.8
SalBow5G5149 Salvia bowleyana HOM05D006302 ORTHO05D007960 7.3e-142 510.0 1233 31.4
Lalb_Chr14g0370421 Lupinus albus HOM05D006302 ORTHO05D007960 1.6e-141 508.8 1224 30.2
ATR0598G116 Amborella trichopoda HOM05D006302 ORTHO05D007960 6.1e-141 506.9 1229 30.3
MSTRG.23195 Avicennia marina HOM05D006302 ORTHO05D007960 8.0e-141 506.5 1223 31.0
FvH4_5g17940 Fragaria vesca HOM05D006302 ORTHO05D007960 8.0e-141 506.5 1229 30.7
Lj2g0026336 Lotus japonicus HOM05D006302 ORTHO05D007960 1.8e-140 505.4 1229 30.8
FAN08G1906 Fragaria x ananassa HOM05D006302 ORTHO05D007960 2.3e-140 505.0 1234 30.8
FAN18G4444 Fragaria x ananassa HOM05D006302 ORTHO05D007960 3.0e-140 504.6 1229 30.6
Ca_23670_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 5.2e-140 503.8 1230 30.2
PSO063G0294 Papaver somniferum HOM05D006302 ORTHO05D007960 8.9e-140 503.1 1218 30.4
Manes.06G000900 Manihot esculenta HOM05D006302 ORTHO05D007960 1.2e-139 502.7 1235 30.4
Medtr4g016590 Medicago truncatula HOM05D006302 ORTHO05D007960 1.2e-139 502.7 1228 30.0
TPR.G28992 Trifolium pratense HOM05D006302 ORTHO05D007960 2.0e-139 501.9 1220 30.2
Sp3g15860 Schrenkiella parvula HOM05D006302 ORTHO05D007960 2.6e-139 501.5 1210 31.4
Psat1g124600 Pisum sativum HOM05D006302 ORTHO05D007960 7.5e-139 500.0 1220 30.2
EL10Ac8g19491 Beta vulgaris HOM05D006302 ORTHO05D007960 3.7e-138 497.7 1236 30.6
CsaV3_1G007420 Cucumis sativus L. HOM05D006302 ORTHO05D007960 6.4e-138 496.9 1222 30.7
Sed0020457 Sechium edule HOM05D006302 ORTHO05D007960 1.1e-137 496.1 1220 30.5
Lsat_1_v5_gn_2_15380 Lactuca sativa HOM05D006302 ORTHO05D007960 1.4e-137 495.7 1229 31.2
DCAR_010206 Daucus carota HOM05D006302 ORTHO05D007960 4.1e-137 494.2 1229 29.9
PGR083G1118 Punica granatum HOM05D006302 ORTHO05D007960 5.4e-137 493.8 1235 31.3
C05p48650 Brassica napus HOM05D006302 ORTHO05D007960 1.6e-136 492.3 1211 31.8
BolC5t33600H Brassica oleracea HOM05D006302 ORTHO05D007960 1.6e-136 492.3 1211 31.8
ClCG01G014910 Citrullus lanatus HOM05D006302 ORTHO05D007960 1.6e-136 492.3 1227 30.2
Eucgr.H00592 Eucalyptus grandis HOM05D006302 ORTHO05D007960 1.6e-136 492.3 1229 30.7
HanXRQChr01g0002621 Helianthus annuus HOM05D006302 ORTHO05D007960 1.6e-136 492.3 1227 31.0
Aa31LG8G4630 Aethionema arabicum HOM05D006302 ORTHO05D007960 2.0e-136 491.9 1240 30.6
Thecc.03G067700 Theobroma cacao HOM05D006302 ORTHO05D007960 2.0e-136 491.9 1214 30.6
Solyc03g098160.3 Solanum lycopersicum HOM05D006302 ORTHO05D007960 2.7e-136 491.5 1234 30.9
Carub.0003s1747 Capsella rubella HOM05D006302 ORTHO05D007960 3.5e-136 491.1 1208 31.0
VMungo0464G0980 Vigna mungo HOM05D006302 ORTHO05D007960 4.6e-136 490.7 1225 29.6
Rhsim09G0028600 Rhododendron simsii HOM05D006302 ORTHO05D007960 7.8e-136 490.0 1221 30.3
Sopen03g028860 Solanum pennellii HOM05D006302 ORTHO05D007960 7.8e-136 490.0 1241 30.6
Ciclev10018592m.g Citrus clementina HOM05D006302 ORTHO05D007960 3.9e-135 487.6 1200 31.5
CAN.G637.21 Capsicum annuum HOM05D006302 ORTHO05D007960 6.6e-135 486.9 1248 30.4
Sabra15G0027400 Salix brachista HOM05D006302 ORTHO05D007960 5.6e-134 483.8 1243 30.5
Prupe.5G239800 Prunus persica HOM05D006302 ORTHO05D007960 7.3e-134 483.4 1221 31.7
A05p32110 Brassica napus HOM05D006302 ORTHO05D007960 9.5e-134 483.0 1145 32.0
Actinidia34644 Actinidia chinensis HOM05D006302 ORTHO05D007960 2.1e-133 481.9 1238 31.1
Thhalv10019937m.g Eutrema salsugineum HOM05D006302 ORTHO05D007960 2.8e-133 481.5 1207 31.9
Gohir.A03G090800 Gossypium hirsutum HOM05D006302 ORTHO05D007960 3.6e-133 481.1 1204 30.8
Nitab4.5_0005200g0040 Nicotiana tabacum HOM05D006302 ORTHO05D007960 8.0e-133 479.9 1229 30.4
Gohir.D02G118900 Gossypium hirsutum HOM05D006302 ORTHO05D007960 1.1e-132 479.6 1211 30.6
CDE07G1110 Ceratophyllum demersum HOM05D006302 ORTHO05D007960 4.0e-132 477.6 1226 29.3
MD14G1242200 Malus domestica HOM05D006302 ORTHO05D007960 6.8e-132 476.9 1232 29.6
AL3G30880 Arabidopsis lyrata HOM05D006302 ORTHO05D007960 8.9e-132 476.5 1206 30.7
ECA238G1211 Erigeron canadensis HOM05D006302 ORTHO05D007960 8.9e-132 476.5 1234 30.1
THA.LOC104821822 Tarenaya hassleriana HOM05D006302 ORTHO05D007960 1.5e-131 475.7 1209 31.1
arahy.Tifrunner.gnm1.ann1.YU9TRY Arachis hypogaea HOM05D006302 ORTHO05D007960 3.4e-131 474.6 1262 30.4
Gorai.005G134900 Gossypium raimondii HOM05D006302 ORTHO05D007960 7.5e-131 473.4 1211 30.5
AT3G17740 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 1.7e-130 472.2 1209 31.3
CSS0040809 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 1.7e-130 472.2 1236 29.6
Cc04_g09070 Coffea canephora HOM05D006302 ORTHO05D007960 1.1e-129 469.5 1228 30.1
BcaC05g28760 Brassica carinata HOM05D006302 ORTHO05D007960 2.7e-128 464.9 1188 31.1
Oeu060652.1 Olea europaea HOM05D006302 ORTHO05D007960 2.7e-128 464.9 1211 29.6
vmacro22676 Vaccinium macrocarpon HOM05D006302 ORTHO05D007960 7.8e-128 463.4 1257 29.7
Os02g0772500 Oryza sativa ssp. japonica HOM05D006302 ORTHO05D007960 1.0e-127 463.0 1229 29.9
Zm00001eb256430 Zea mays HOM05D006302 ORTHO05D007960 1.3e-127 462.6 1226 30.3
SGA_v2.0_scaffold90G27777 Striga asiatica HOM05D006302 ORTHO05D007960 1.7e-127 462.2 1249 30.3
Atru.chr9.205 Acer truncatum HOM05D006302 ORTHO05D007960 3.3e-126 458.0 1227 30.8
CSS0030577 Camellia sinensis var. sinensis HOM05D006302 ORTHO05D007960 3.3e-126 458.0 1235 29.3
Haze_18958 Corylus avellana HOM05D006302 ORTHO05D007960 9.5e-126 456.4 1352 28.6
BraA05t22040Z Brassica rapa HOM05D006302 ORTHO05D007960 4.4e-123 447.6 1141 31.2
Phvul.004G145200 Phaseolus vulgaris HOM05D006302 ORTHO05D007960 7.5e-123 446.8 1229 28.1
SalBow5G5312 Salvia bowleyana HOM05D006302 ORTHO05D007960 2.1e-120 438.7 1200 29.1
Peaxi162Scf00171g00631 Petunia axillaris HOM05D006302 ORTHO05D007960 2.3e-119 435.3 1153 29.4
Nitab4.5_0001180g0010 Nicotiana tabacum HOM05D006302 ORTHO05D007960 3.9e-119 434.5 1213 29.7
arahy.Tifrunner.gnm1.ann1.2W4JQ8 Arachis hypogaea HOM05D006302 ORTHO05D007960 4.7e-117 427.6 1244 29.7
MELO3C002158.2 Cucumis melo HOM05D006302 ORTHO05D007960 8.1e-117 426.8 1177 28.9
SHI19119 Sapria himalayana HOM05D006302 ORTHO05D007960 9.6e-110 403.3 1249 28.3
QL10p033145 Quercus lobata HOM05D006302 ORTHO05D007960 9.0e-108 396.7 1635 25.4
Nn4g24592 Nelumbo nucifera HOM05D006302 ORTHO05D007960 9.9e-107 393.3 1144 28.5
Migut.O00235 Erythranthe guttata HOM05D006302 ORTHO05D007960 4.2e-105 387.9 1128 29.6
Lj9C414G14 Lonicera japonica HOM05D006302 ORTHO05D007960 1.3e-103 382.9 995 28.5
unitig_22.g5442 Utricularia gibba HOM05D006302 ORTHO05D007960 1.4e-100 372.9 1034 30.2
Sc10g0008940 Simmondsia chinensis HOM05D006302 ORTHO05D007960 2.4e-97 362.1 852 31.8
CARHR093080 Cardamine hirsuta HOM05D006302 ORTHO05D007960 5.4e-97 360.9 849 32.5
Duzib084G0934 Durio zibethinus HOM05D006302 ORTHO05D007960 5.3e-92 344.4 1215 26.3
AUR62034018 Chenopodium quinoa HOM05D006302 ORTHO05D007960 1.9e-89 335.9 1046 27.7
HPP92_002770 Vanilla planifolia HOM05D006302 ORTHO05D007960 3.5e-80 305.1 1111 25.7
Ca_26696_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 2.2e-77 295.8 650 30.2
AT3G17712 Arabidopsis thaliana HOM05D006302 ORTHO05D007960 1.4e-73 283.1 637 31.2
Glyma.09G169600 Glycine max HOM05D006302 ORTHO05D007960 3.3e-70 271.9 681 30.2
Ca_05032_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 1.4e-63 250.0 609 28.9
Ca_22760_v3 Cicer arietinum L. HOM05D006302 ORTHO05D007960 1.4e-63 250.0 609 28.9
Cpa.g.sc7.123 Carica papaya HOM05D006302 ORTHO05D007960 7.2e-57 227.6 435 32.2
COL.COLO4_09239 Corchorus olitorius HOM05D006302 ORTHO05D007960 4.7e-56 224.9 477 30.2
C05p48600 Brassica napus HOM05D006302 ORTHO05D007960 4.4e-46 191.8 433 31.2
Sc10g0008950 Simmondsia chinensis HOM05D006302 ORTHO05D007960 5.2e-39 168.3 342 31.6
Ah.14g085900 Amaranthus hybridus HOM05D006302 ORTHO05D007960 1.3e-34 153.7 179 44.7
Cre13.g589650 Chlamydomonas reinhardtii HOM05D006302 ORTHO05D007960 3.1e-28 132.5 757 26.4
Lsat_1_v5_gn_0_6420 Lactuca sativa HOM05D002112 ORTHO05D007960 3.2e-20 105.9 275 25.5
Medtr6g072640 Medicago truncatula HOM05D006302 ORTHO05D007960 1.8e-07 63.5 61 52.5
Medtr6g075030 Medicago truncatula HOM05D006302 ORTHO05D007960 4.0e-07 62.4 75 48.0
Medtr6g074610 Medicago truncatula HOM05D006302 ORTHO05D007960 2.0e-06 60.1 114 36.0
CAN.G852.1 Capsicum annuum HOM05D006302 ORTHO05D007960 9.9e-06 57.8 60 45.0


User provided reference genes

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