Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48434 Chara braunii HOM05D005826 ORTHO05D004357 1.2e-84 316.6 172 100.0
Migut.N00974 Erythranthe guttata HOM05D005826 ORTHO05D004357 1.7e-51 206.5 148 68.9
SGA_v2.0_scaffold22G09707 Striga asiatica HOM05D005826 ORTHO05D004357 1.9e-50 203.0 148 67.6
AUR62000478 Chenopodium quinoa HOM05D005826 ORTHO05D004357 4.2e-50 201.8 148 68.9
AUR62006820 Chenopodium quinoa HOM05D005826 ORTHO05D004357 4.2e-50 201.8 148 68.9
Mapoly0026s0010 Marchantia polymorpha HOM05D005826 ORTHO05D004357 4.2e-50 201.8 148 72.3
unitig_26.g9561 Utricularia gibba HOM05D005826 ORTHO05D005018 4.2e-50 201.8 148 67.6
Pp3c20_6860 Physcomitrium patens HOM05D005826 ORTHO05D004357 1.6e-49 199.9 130 76.2
HPP92_006322 Vanilla planifolia HOM05D005826 ORTHO05D004357 4.6e-49 198.4 166 62.7
HPP92_027884 Vanilla planifolia HOM05D005826 ORTHO05D004357 4.6e-49 198.4 166 62.7
PGR083G1613 Punica granatum HOM05D005826 ORTHO05D004357 3.9e-48 195.3 152 64.5
Lj5C318G10 Lonicera japonica HOM05D002908 ORTHO05D007390 1.1e-47 193.7 134 71.6
EL10Ac4g09561 Beta vulgaris HOM05D005826 ORTHO05D004357 1.9e-47 193.0 138 68.8
CANSAT54G1651 Cannabis sativa HOM05D005826 ORTHO05D004357 9.6e-47 190.7 133 69.9
Hund21832 Selenicereus undatus HOM05D005826 ORTHO05D004357 1.3e-46 190.3 163 61.3
COL.COLO4_05485 Corchorus olitorius HOM05D005826 ORTHO05D004357 1.6e-46 189.9 148 66.2
Nn3g21953 Nelumbo nucifera HOM05D005826 ORTHO05D004357 1.6e-46 189.9 119 80.7
Sc09g0002410 Simmondsia chinensis HOM05D005826 ORTHO05D004357 1.6e-46 189.9 133 69.9
TAR636G1621 Trochodendron aralioides HOM05D005826 ORTHO05D004357 2.1e-46 189.5 148 69.6
Dinv30950 Davidia involucrata HOM05D005826 ORTHO05D004357 3.7e-46 188.7 125 74.4
Eucgr.B01823 Eucalyptus grandis HOM05D005826 ORTHO05D004357 4.8e-46 188.3 152 62.5
Phvul.001G222000 Phaseolus vulgaris HOM05D005826 ORTHO05D004357 8.1e-46 187.6 148 64.9
TWI12G0016 Tripterygium wilfordii HOM05D005826 ORTHO05D004357 8.1e-46 187.6 133 69.2
Hma1.2p1_0052F.1_g030400 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 1.1e-45 187.2 128 71.1
Actinidia17738 Actinidia chinensis HOM05D005826 ORTHO05D004357 1.4e-45 186.8 120 75.8
MD12G1199800 Malus domestica HOM05D005826 ORTHO05D004357 1.4e-45 186.8 122 74.6
VMungo1383G1915 Vigna mungo HOM05D005826 ORTHO05D004357 1.4e-45 186.8 148 64.9
CiPaw.07G036400 Carya illinoinensis HOM05D005826 ORTHO05D004357 1.8e-45 186.4 120 76.7
Atru.chr12.1539 Acer truncatum HOM05D005826 ORTHO05D004357 2.4e-45 186.0 122 73.8
DCAR_006590 Daucus carota HOM05D005826 ORTHO05D004357 3.1e-45 185.7 120 75.0
Rhsim11G0105000 Rhododendron simsii HOM05D005826 ORTHO05D004357 4.0e-45 185.3 119 74.8
Solyc01g101250.3 Solanum lycopersicum HOM05D005826 ORTHO05D004357 4.0e-45 185.3 125 70.4
Sopen01g044700 Solanum pennellii HOM05D005826 ORTHO05D004357 4.0e-45 185.3 125 70.4
vmacro01667 Vaccinium macrocarpon HOM05D005826 ORTHO05D004357 4.0e-45 185.3 119 74.8
CsaV3_1G038040 Cucumis sativus L. HOM05D005826 ORTHO05D004357 6.9e-45 184.5 119 76.5
Cfa006771 Carpinus fangiana HOM05D005826 ORTHO05D004357 9.0e-45 184.1 120 75.8
Haze_03986 Corylus avellana HOM05D005826 ORTHO05D004357 9.0e-45 184.1 120 75.8
Hma1.2p1_0052F.1_g030390 Hydrangea macrophylla HOM05D005826 ORTHO05D004357 9.0e-45 184.1 148 64.2
arahy.Tifrunner.gnm1.ann1.CWLZ7L Arachis hypogaea HOM05D005826 ORTHO05D004357 1.2e-44 183.7 148 62.8
Ciclev10012662m.g Citrus clementina HOM05D005826 ORTHO05D004357 1.2e-44 183.7 120 75.0
Aqoxy2G02470 Aquilegia oxysepala HOM05D005826 ORTHO05D004357 2.0e-44 183.0 120 74.2
Nn4g25335 Nelumbo nucifera HOM05D005826 ORTHO05D004357 2.6e-44 182.6 118 77.1
Sed0027683 Sechium edule HOM05D005826 ORTHO05D004357 3.4e-44 182.2 120 75.0
TPR.G1630 Trifolium pratense HOM05D005826 ORTHO05D004357 3.4e-44 182.2 125 70.4
Psat3g015120 Pisum sativum HOM05D005826 ORTHO05D004357 4.5e-44 181.8 122 72.1
Ca_09273_v3 Cicer arietinum L. HOM05D005826 ORTHO05D004357 5.8e-44 181.4 119 73.9
SMO196G0190 Selaginella moellendorffii HOM05D005826 ORTHO05D004357 5.8e-44 181.4 160 63.8
Lalb_Chr18g0046231 Lupinus albus HOM05D005826 ORTHO05D004357 7.6e-44 181.0 120 73.3
Lj1g0011738 Lotus japonicus HOM05D005826 ORTHO05D004357 9.9e-44 180.6 128 68.0
arahy.Tifrunner.gnm1.ann1.TKMT5T Arachis hypogaea HOM05D005826 ORTHO05D004357 1.3e-43 180.3 125 68.8
Medtr7g111520 Medicago truncatula HOM05D005826 ORTHO05D004357 1.7e-43 179.9 119 73.9
Hund07271 Selenicereus undatus HOM05D005826 ORTHO05D004357 1.7e-43 179.9 130 67.7
Glyma.19G225400 Glycine max HOM05D005826 ORTHO05D004357 2.2e-43 179.5 119 73.9
SEGI_10560 Sequoiadendron giganteum HOM05D005826 ORTHO05D004357 2.2e-43 179.5 148 64.2
Glyma.03G228100 Glycine max HOM05D005826 ORTHO05D004357 2.9e-43 179.1 119 73.1
Manes.09G181300 Manihot esculenta HOM05D005826 ORTHO05D004357 2.9e-43 179.1 120 71.7
GSVIVG01031331001 Vitis vinifera HOM05D005826 ORTHO05D004357 3.8e-43 178.7 136 68.4
Cpa.g.sc48.51 Carica papaya HOM05D005826 ORTHO05D004357 6.4e-43 177.9 116 75.9
THA.LOC104821749 Tarenaya hassleriana HOM05D005826 ORTHO05D004357 1.1e-42 177.2 117 73.5
Thhalv10004695m.g Eutrema salsugineum HOM05D005826 ORTHO05D004357 2.4e-42 176.0 129 65.1
CAN.G1248.16 Capsicum annuum HOM05D005826 ORTHO05D004357 9.3e-42 174.1 134 65.7
Lsat_1_v5_gn_7_64900 Lactuca sativa HOM05D005826 ORTHO05D004357 2.1e-41 172.9 138 65.9
Carub.0006s2438 Capsella rubella HOM05D005826 ORTHO05D004357 7.9e-41 171.0 120 68.3
Zm00001eb089260 Zea mays HOM05D005826 ORTHO05D004357 7.9e-41 171.0 120 72.5
AT5G26610 Arabidopsis thaliana HOM05D005826 ORTHO05D004357 1.0e-40 170.6 119 68.9
Thecc.05G329600 Theobroma cacao HOM05D005826 ORTHO05D004357 7.4e-39 164.5 148 59.5
AL6G38590 Arabidopsis lyrata HOM05D005826 ORTHO05D004357 3.7e-38 162.2 148 57.4
Sabra13G0001500 Salix brachista HOM05D005826 ORTHO05D004357 4.8e-38 161.8 122 65.6
AagrBONN_evm.TU.Sc2ySwM_362.2503 Anthoceros agrestis HOM05D005826 ORTHO05D004357 1.4e-37 160.2 137 62.8
Manes.08G107500 Manihot esculenta HOM05D005826 ORTHO05D004357 3.1e-37 159.1 130 62.3
ClCG03G017880 Citrullus lanatus HOM05D005826 ORTHO05D004357 4.0e-37 158.7 153 56.9
FAN09G2233 Fragaria x ananassa HOM05D005826 ORTHO05D004357 5.3e-37 158.3 153 54.9
Ah.06g190730 Amaranthus hybridus HOM05D005826 ORTHO05D004357 1.9e-34 149.8 109 67.0
MBI12_g27791_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 3.2e-34 149.1 114 70.2
FvH4_6g08510 Fragaria vesca HOM05D005826 ORTHO05D004357 7.1e-34 147.9 119 62.2
FAN14G1262 Fragaria x ananassa HOM05D005826 ORTHO05D004357 7.1e-34 147.9 119 62.2
ATR0796G273 Amborella trichopoda HOM05D005826 ORTHO05D004357 1.5e-31 140.2 148 54.7
A09p05710 Brassica napus HOM05D005826 ORTHO05D004357 7.4e-31 137.9 152 50.0
BraA09t36211Z Brassica rapa HOM05D005826 ORTHO05D004357 7.4e-31 137.9 152 50.0
ECA240G4745 Erigeron canadensis HOM05D005826 ORTHO05D004357 5.9e-28 128.3 133 57.1
Rhsim11G0104700 Rhododendron simsii HOM05D005826 ORTHO05D004357 5.9e-28 128.3 134 53.7
MBI09_g02136_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 2.9e-27 125.9 114 63.2
Aa31LG11G9920 Aethionema arabicum HOM05D005826 ORTHO05D004357 5.0e-27 125.2 118 57.6
MSTRG.27910 Avicennia marina HOM05D005826 ORTHO05D004357 1.4e-26 123.6 148 50.0
BcaNung03909 Brassica carinata HOM05D005826 ORTHO05D004357 4.2e-26 122.1 148 47.3
HanXRQChr09g0247941 Helianthus annuus HOM05D005826 ORTHO05D004357 5.5e-26 121.7 119 56.3
BcaC04g23633 Brassica carinata HOM05D005826 ORTHO05D004357 1.6e-25 120.2 152 45.4
C09p06300 Brassica napus HOM05D005826 ORTHO05D004357 1.6e-25 120.2 152 45.4
BolC9t53550H Brassica oleracea HOM05D005826 ORTHO05D004357 1.6e-25 120.2 152 45.4
Dinv24515 Davidia involucrata HOM05D005826 ORTHO05D004357 2.1e-25 119.8 134 54.5
Sp2g21260 Schrenkiella parvula HOM05D005826 ORTHO05D004357 1.3e-24 117.1 120 54.2
CSS0017545 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 3.0e-24 115.9 120 55.8
CSS0045001 Camellia sinensis var. sinensis HOM05D005826 ORTHO05D004357 3.0e-24 115.9 120 55.8
CARHR186850 Cardamine hirsuta HOM05D005826 ORTHO05D004357 5.1e-24 115.2 119 53.8
FAN02G3127 Fragaria x ananassa HOM05D005826 ORTHO05D004357 8.7e-24 114.4 131 48.9
Cre03.g201250 Chlamydomonas reinhardtii HOM05D005826 ORTHO05D004357 2.5e-23 112.8 168 43.5
Gohir.A13G177700 Gossypium hirsutum HOM05D005826 ORTHO05D004357 3.7e-22 109.0 120 52.5
Gohir.D13G184300 Gossypium hirsutum HOM05D005826 ORTHO05D004357 3.7e-22 109.0 120 52.5
Gorai.013G210000 Gossypium raimondii HOM05D005826 ORTHO05D004357 3.7e-22 109.0 120 52.5
Potri.005G002700 Populus trichocarpa HOM05D005826 ORTHO05D004357 3.7e-22 109.0 128 48.4
Nitab4.5_0005662g0030 Nicotiana tabacum HOM05D005826 ORTHO05D004357 1.1e-21 107.5 120 51.7
Peaxi162Scf00194g00018 Petunia axillaris HOM05D005826 ORTHO05D004357 1.1e-21 107.5 120 51.7
RcHm_v2.0_Chr3g0458551 Rosa chinensis HOM05D005826 ORTHO05D004357 1.8e-21 106.7 119 52.1
Cc02_g35870 Coffea canephora HOM05D005826 ORTHO05D004357 5.3e-21 105.1 120 50.8
Os04g0115400 Oryza sativa ssp. japonica HOM05D005826 ORTHO05D004357 6.9e-21 104.8 66 77.3
Nitab4.5_0002516g0020 Nicotiana tabacum HOM05D005826 ORTHO05D004357 1.2e-20 104.0 121 50.4
PSO210G7107 Papaver somniferum HOM05D005826 ORTHO05D004357 2.6e-20 102.8 119 50.4
PSO761G0619 Papaver somniferum HOM05D005826 ORTHO05D004357 1.3e-19 100.5 119 49.6
MELO3C021663.2 Cucumis melo HOM05D005826 ORTHO05D004357 1.7e-19 100.1 65 75.4
CDE01G0499 Ceratophyllum demersum HOM05D005826 ORTHO05D004357 3.8e-19 99.0 119 49.6
QL03p011008 Quercus lobata HOM05D005826 ORTHO05D004357 1.1e-18 97.4 120 48.3
Sabra05G0000100 Salix brachista HOM05D005826 ORTHO05D004357 1.1e-18 97.4 122 46.7
Sabra05G0014200 Salix brachista HOM05D005826 ORTHO05D004357 1.1e-18 97.4 122 46.7
PGR083G0870 Punica granatum HOM05D005826 ORTHO05D004357 1.9e-18 96.7 81 59.3
BcaB04g19716 Brassica carinata HOM05D005826 ORTHO05D004357 1.6e-17 93.6 125 44.0
Prupe.6G304400 Prunus persica HOM05D005826 ORTHO05D004357 4.7e-17 92.0 148 41.9
Potri.013G002100 Populus trichocarpa HOM05D005826 ORTHO05D004357 1.1e-15 87.4 59 69.5
FAN05G0435 Fragaria x ananassa HOM05D005826 ORTHO05D004357 1.5e-15 87.0 153 39.2
MBI12_g47801_MAGBIO Magnolia biondii HOM05D005826 ORTHO05D004357 2.6e-15 86.3 72 66.7
BraA06t26622Z Brassica rapa HOM05D005826 ORTHO05D004357 9.7e-15 84.3 92 47.8
A06p36960 Brassica napus HOM05D005826 ORTHO05D004357 7.7e-12 74.7 61 57.4
BcaNung03680 Brassica carinata HOM05D005826 ORTHO05D004357 3.7e-06 55.8 66 48.5
C07p41530 Brassica napus HOM05D005826 ORTHO05D004357 3.7e-06 55.8 66 48.5
BolC7t44686H Brassica oleracea HOM05D005826 ORTHO05D004357 3.7e-06 55.8 66 48.5


User provided reference genes

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