Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48375 Chara braunii HOM05D007059 ORTHO05D009155 9.3e-202 706.8 401 100.0
Potri.010G169700 Populus trichocarpa HOM05D007059 ORTHO05D009155 4.7e-36 156.4 139 55.4
Sabra10G0129500 Salix brachista HOM05D007059 ORTHO05D009155 4.7e-36 156.4 139 55.4
ATR0124G031 Amborella trichopoda HOM05D007059 ORTHO05D009155 1.0e-35 155.2 123 59.3
AL3G33460 Arabidopsis lyrata HOM05D007059 ORTHO05D009155 2.3e-35 154.1 122 59.8
CARHR095430 Cardamine hirsuta HOM05D007059 ORTHO05D009155 2.3e-35 154.1 122 59.8
AUR62012864 Chenopodium quinoa HOM05D007059 ORTHO05D009155 2.3e-35 154.1 132 56.1
AUR62017646 Chenopodium quinoa HOM05D007059 ORTHO05D009155 3.0e-35 153.7 128 57.0
Nitab4.5_0007261g0020 Nicotiana tabacum HOM05D007059 ORTHO05D009155 3.0e-35 153.7 122 60.7
Nitab4.5_0002113g0150 Nicotiana tabacum HOM05D007059 ORTHO05D009155 4.0e-35 153.3 122 60.7
Peaxi162Scf01172g00004 Petunia axillaris HOM05D007059 ORTHO05D009155 4.0e-35 153.3 122 59.0
unitig_27.g25281 Utricularia gibba HOM05D007059 ORTHO05D009155 4.0e-35 153.3 124 58.1
BcaC09g48947 Brassica carinata HOM05D007059 ORTHO05D009155 5.2e-35 152.9 122 59.0
A01p34850 Brassica napus HOM05D007059 ORTHO05D009155 5.2e-35 152.9 122 59.0
C01p44250 Brassica napus HOM05D007059 ORTHO05D009155 5.2e-35 152.9 122 59.0
BolC1t04385H Brassica oleracea HOM05D007059 ORTHO05D009155 5.2e-35 152.9 122 59.0
BraA01t03568Z Brassica rapa HOM05D007059 ORTHO05D009155 5.2e-35 152.9 122 59.0
Carub.0003s1980 Capsella rubella HOM05D007059 ORTHO05D009155 5.2e-35 152.9 122 59.0
Sp3g17910 Schrenkiella parvula HOM05D007059 ORTHO05D009155 5.2e-35 152.9 122 59.0
VMungo1127G1389 Vigna mungo HOM05D007059 ORTHO05D009155 5.2e-35 152.9 122 59.0
EL10Ac9g22903 Beta vulgaris HOM05D007059 ORTHO05D009155 6.8e-35 152.5 132 55.3
Thhalv10021482m.g Eutrema salsugineum HOM05D007059 ORTHO05D009155 6.8e-35 152.5 136 55.9
Nn4g24915 Nelumbo nucifera HOM05D007059 ORTHO05D009155 6.8e-35 152.5 123 57.7
ClCG11G001160 Citrullus lanatus HOM05D007059 ORTHO05D009155 8.8e-35 152.1 122 58.2
Cc11_g00200 Coffea canephora HOM05D007059 ORTHO05D009155 8.8e-35 152.1 134 56.0
MELO3C020030.2 Cucumis melo HOM05D007059 ORTHO05D009155 8.8e-35 152.1 122 58.2
Phvul.011G032300 Phaseolus vulgaris HOM05D007059 ORTHO05D009155 8.8e-35 152.1 122 59.0
Sed0015909 Sechium edule HOM05D007059 ORTHO05D009155 8.8e-35 152.1 183 44.8
Aa31LG8G6740 Aethionema arabicum HOM05D007059 ORTHO05D009155 1.2e-34 151.8 122 58.2
Aqoxy3G04246 Aquilegia oxysepala HOM05D007059 ORTHO05D009155 1.2e-34 151.8 127 56.7
Migut.E00704 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.2e-34 151.8 124 58.9
Glyma.11G104100 Glycine max HOM05D007059 ORTHO05D009155 1.2e-34 151.8 122 57.4
Sopen04g004490 Solanum pennellii HOM05D007059 ORTHO05D009155 1.2e-34 151.8 122 59.8
PGSC0003DMG400032539 Solanum tuberosum HOM05D007059 ORTHO05D009155 1.2e-34 151.8 122 59.8
CiPaw.05G167400 Carya illinoinensis HOM05D007059 ORTHO05D009155 1.5e-34 151.4 122 58.2
Lj3g0001367 Lotus japonicus HOM05D007059 ORTHO05D009155 1.5e-34 151.4 124 57.3
MBI06_g22349_MAGBIO Magnolia biondii HOM05D007059 ORTHO05D009155 1.5e-34 151.4 123 58.5
Mapoly0055s0010 Marchantia polymorpha HOM05D007059 ORTHO05D009155 1.5e-34 151.4 134 56.0
AagrBONN_evm.TU.Sc2ySwM_344.1288 Anthoceros agrestis HOM05D007059 ORTHO05D009155 2.0e-34 151.0 165 46.7
Solyc04g009370.4 Solanum lycopersicum HOM05D007059 ORTHO05D009155 2.0e-34 151.0 122 59.8
CAN.G624.23 Capsicum annuum HOM05D007059 ORTHO05D009155 2.6e-34 150.6 122 59.8
Glyma.12G029100 Glycine max HOM05D007059 ORTHO05D009155 2.6e-34 150.6 122 57.4
Sc10g0008670 Simmondsia chinensis HOM05D007059 ORTHO05D009155 2.6e-34 150.6 139 53.2
CANSAT35G1437 Cannabis sativa HOM05D007059 ORTHO05D009155 3.4e-34 150.2 131 54.2
PSO063G1277 Papaver somniferum HOM05D007059 ORTHO05D009155 3.4e-34 150.2 138 53.6
PSO782G1004 Papaver somniferum HOM05D007059 ORTHO05D009155 3.4e-34 150.2 138 53.6
Psat7g174240 Pisum sativum HOM05D007059 ORTHO05D009155 3.4e-34 150.2 122 59.0
Ca_03042_v3 Cicer arietinum L. HOM05D007059 ORTHO05D009155 4.4e-34 149.8 122 58.2
Ciclev10033522m.g Citrus clementina HOM05D007059 ORTHO05D009155 4.4e-34 149.8 122 59.0
Gohir.A01G145900 Gossypium hirsutum HOM05D007059 ORTHO05D009155 4.4e-34 149.8 122 58.2
Gohir.D01G138500 Gossypium hirsutum HOM05D007059 ORTHO05D009155 4.4e-34 149.8 122 58.2
Gorai.002G167400 Gossypium raimondii HOM05D007059 ORTHO05D009155 4.4e-34 149.8 122 58.2
HanXRQChr01g0028541 Helianthus annuus HOM05D007059 ORTHO05D009155 4.4e-34 149.8 122 57.4
Lsat_1_v5_gn_4_26421 Lactuca sativa HOM05D007059 ORTHO05D009155 4.4e-34 149.8 122 58.2
TPR.G21564 Trifolium pratense HOM05D007059 ORTHO05D009155 4.4e-34 149.8 122 58.2
GSVIVG01010187001 Vitis vinifera HOM05D007059 ORTHO05D009155 4.4e-34 149.8 137 53.3
Cfa008725 Carpinus fangiana HOM05D004663 ORTHO05D006325 5.7e-34 149.4 122 59.0
Thecc.02G295400 Theobroma cacao HOM05D007059 ORTHO05D009155 5.7e-34 149.4 122 58.2
MSTRG.2053 Avicennia marina HOM05D007059 ORTHO05D009155 7.5e-34 149.1 190 47.9
ECA234G4546 Erigeron canadensis HOM05D007059 ORTHO05D009155 7.5e-34 149.1 122 57.4
COL.COLO4_16620 Corchorus olitorius HOM05D007059 ORTHO05D009155 9.8e-34 148.7 140 51.4
Medtr4g074210 Medicago truncatula HOM05D007059 ORTHO05D009155 9.8e-34 148.7 124 56.5
Atru.chr11.1222 Acer truncatum HOM05D007059 ORTHO05D009155 1.3e-33 148.3 122 57.4
CSS0038027 Camellia sinensis var. sinensis HOM05D007059 ORTHO05D009155 1.3e-33 148.3 122 57.4
TAR629G1440 Trochodendron aralioides HOM05D007059 ORTHO05D009155 1.7e-33 147.9 123 56.9
Actinidia38411 Actinidia chinensis HOM05D007059 ORTHO05D009155 2.2e-33 147.5 122 57.4
Prupe.1G344600 Prunus persica HOM05D007059 ORTHO05D009155 2.2e-33 147.5 122 56.6
arahy.Tifrunner.gnm1.ann1.NRJ0Q8 Arachis hypogaea HOM05D007059 ORTHO05D009155 2.8e-33 147.1 135 51.1
arahy.Tifrunner.gnm1.ann1.PC0HA4 Arachis hypogaea HOM05D007059 ORTHO05D009155 2.8e-33 147.1 135 51.1
Manes.16G044801 Manihot esculenta HOM05D007059 ORTHO05D009155 2.8e-33 147.1 127 55.9
Eucgr.G02016 Eucalyptus grandis HOM05D007059 ORTHO05D009155 3.7e-33 146.7 122 57.4
Pp3c2_14430 Physcomitrium patens HOM05D007059 ORTHO05D009155 3.7e-33 146.7 218 44.0
Lalb_Chr01g0001591 Lupinus albus HOM05D007059 ORTHO05D009155 4.8e-33 146.4 122 56.6
Rhsim04G0168700 Rhododendron simsii HOM05D007059 ORTHO05D009155 4.8e-33 146.4 132 52.3
RcHm_v2.0_Chr4g0446371 Rosa chinensis HOM05D007059 ORTHO05D009155 4.8e-33 146.4 133 51.9
FvH4_4g36660 Fragaria vesca HOM05D007059 ORTHO05D009155 8.3e-33 145.6 122 55.7
FAN12G0665 Fragaria x ananassa HOM05D007059 ORTHO05D009155 8.3e-33 145.6 122 55.7
MD16G1006000 Malus domestica HOM05D007059 ORTHO05D009155 1.8e-32 144.4 122 55.7
vmacro08590 Vaccinium macrocarpon HOM05D007059 ORTHO05D009155 1.8e-32 144.4 122 56.6
FAN07G2854 Fragaria x ananassa HOM05D007059 ORTHO05D009155 4.1e-32 143.3 122 54.9
Hund08500 Selenicereus undatus HOM05D007059 ORTHO05D009155 4.1e-32 143.3 110 60.9
Zm00001eb259420 Zea mays HOM05D007059 ORTHO05D009155 5.4e-32 142.9 123 56.9
Pp3c10_16080 Physcomitrium patens HOM05D007059 ORTHO05D009155 2.0e-31 141.0 125 56.8
SMO114G0039 Selaginella moellendorffii HOM05D007059 ORTHO05D009155 2.0e-31 141.0 122 53.3
HPP92_002491 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.7e-31 140.6 122 54.1
HPP92_002544 Vanilla planifolia HOM05D007059 ORTHO05D009155 2.7e-31 140.6 122 54.1
Oeu027905.1 Olea europaea HOM05D007059 ORTHO05D009155 2.3e-30 137.5 122 56.6
TWI77G0260 Tripterygium wilfordii HOM05D007059 ORTHO05D009155 5.0e-30 136.3 109 59.6
Lj3A851T65 Lonicera japonica HOM05D007059 ORTHO05D009155 6.5e-30 136.0 201 40.3
SGA_v2.0_scaffold88G27235 Striga asiatica HOM05D007059 ORTHO05D009155 1.5e-29 134.8 117 55.6
Cpa.g.sc298.2 Carica papaya HOM05D007059 ORTHO05D009155 9.5e-29 132.1 118 55.1
DCAR_023442 Daucus carota HOM05D007059 ORTHO05D008600 8.0e-28 129.0 106 56.6
Migut.E00613 Erythranthe guttata HOM05D007059 ORTHO05D009155 1.4e-27 128.3 167 46.1
Haze_11738 Corylus avellana HOM05D007059 ORTHO05D009155 3.0e-27 127.1 103 59.2
THA.LOC104801903 Tarenaya hassleriana HOM05D007059 ORTHO05D009155 1.4e-24 118.2 130 50.8
Duzib251G0490 Durio zibethinus HOM05D007059 ORTHO05D009155 1.0e-22 112.1 122 47.5
CDE04G0067 Ceratophyllum demersum HOM05D007059 ORTHO05D009155 3.0e-19 100.5 136 39.7
Actinidia13703 Actinidia chinensis HOM05D007059 ORTHO05D009155 3.3e-13 80.5 122 38.5
CsaV3_5G013210 Cucumis sativus L. HOM05D007059 ORTHO05D009155 7.3e-13 79.3 74 51.4
AT3G19900 Arabidopsis thaliana HOM05D007059 ORTHO05D009155 1.2e-12 78.6 57 63.2
Dinv01917 Davidia involucrata HOM05D007059 ORTHO05D009155 3.6e-12 77.0 96 42.7
PGR031G0357 Punica granatum HOM05D007059 ORTHO05D009155 6.2e-12 76.3 57 59.6
SEGI_27177 Sequoiadendron giganteum HOM05D007059 ORTHO05D009155 1.8e-11 74.7 59 55.9
Cre01.g007050 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D009155 5.2e-11 73.2 83 44.6
Cre03.g197850 Chlamydomonas reinhardtii HOM05D007059 ORTHO05D034487 1.5e-10 71.6 99 38.4
Actinidia14379 Actinidia chinensis HOM05D007059 ORTHO05D009155 4.6e-07 60.1 52 51.9
MCO14G049 Micromonas commoda HOM05D007059 ORTHO05D009155 1.0e-06 58.9 86 37.2
BolC5t33201H Brassica oleracea HOM05D007059 ORTHO05D009155 3.0e-06 57.4 74 44.6


User provided reference genes

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