Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g48013 Chara braunii HOM05D004029 ORTHO05D004613 2.3e-75 285.4 138 100.0
Migut.H01912 Erythranthe guttata HOM05D004029 ORTHO05D004613 5.7e-26 121.3 119 47.1
MSTRG.12924 Avicennia marina HOM05D004029 ORTHO05D004613 7.5e-26 120.9 119 47.9
SGA_v2.0_scaffold77G25216 Striga asiatica HOM05D004029 ORTHO05D004613 2.9e-25 119.0 119 47.9
CAN.G162.91 Capsicum annuum HOM05D004029 ORTHO05D004613 4.9e-25 118.2 107 50.5
Solyc07g063440.3 Solanum lycopersicum HOM05D004029 ORTHO05D004613 6.3e-25 117.9 107 50.5
Sopen07g031610 Solanum pennellii HOM05D004029 ORTHO05D004613 6.3e-25 117.9 107 50.5
unitig_0.g2259 Utricularia gibba HOM05D004029 ORTHO05D004613 1.4e-24 116.7 119 45.4
CsaV3_3G044490 Cucumis sativus L. HOM05D004029 ORTHO05D004613 7.0e-24 114.4 107 48.6
Dinv08326 Davidia involucrata HOM05D004029 ORTHO05D004613 9.2e-24 114.0 107 48.6
Sed0019496 Sechium edule HOM05D004029 ORTHO05D004613 9.2e-24 114.0 107 48.6
CSS0001233 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 1.2e-23 113.6 107 47.7
CSS0038840 Camellia sinensis var. sinensis HOM05D004029 ORTHO05D004613 1.2e-23 113.6 107 47.7
ATR0064G128 Amborella trichopoda HOM05D004029 ORTHO05D004613 1.6e-23 113.2 107 48.6
Peaxi162Scf01111g00112 Petunia axillaris HOM05D004029 ORTHO05D004613 1.6e-23 113.2 107 48.6
DCAR_013079 Daucus carota HOM05D004029 ORTHO05D004613 2.0e-23 112.8 107 50.5
Glyma.12G220900 Glycine max HOM05D004029 ORTHO05D004613 2.7e-23 112.5 107 47.7
Nn1g03970 Nelumbo nucifera HOM05D004029 ORTHO05D004613 2.7e-23 112.5 119 45.4
Sabra11G0109200 Salix brachista HOM05D004029 ORTHO05D004613 2.7e-23 112.5 107 47.7
Sc03g0009690 Simmondsia chinensis HOM05D004029 ORTHO05D004613 2.7e-23 112.5 107 51.4
Medtr2g080050 Medicago truncatula HOM05D004029 ORTHO05D004613 3.5e-23 112.1 119 43.7
Phvul.005G085200 Phaseolus vulgaris HOM05D004029 ORTHO05D004613 3.5e-23 112.1 107 47.7
Lsat_1_v5_gn_7_105721 Lactuca sativa HOM05D004029 ORTHO05D004613 5.9e-23 111.3 102 49.0
Lsat_1_v5_gn_9_95861 Lactuca sativa HOM05D004029 ORTHO05D004613 5.9e-23 111.3 107 48.6
Potri.011G123900 Populus trichocarpa HOM05D004029 ORTHO05D004613 5.9e-23 111.3 107 46.7
PGR031G0420 Punica granatum HOM05D004029 ORTHO05D004613 5.9e-23 111.3 107 47.7
Glyma.13G280700 Glycine max HOM05D004029 ORTHO05D004613 1.0e-22 110.5 107 46.7
Atru.chr2.2810 Acer truncatum HOM05D004029 ORTHO05D004613 1.3e-22 110.2 107 47.7
GSVIVG01014409001 Vitis vinifera HOM05D004029 ORTHO05D004613 1.3e-22 110.2 107 47.7
Lj1C850G7 Lonicera japonica HOM05D004029 ORTHO05D004613 1.7e-22 109.8 107 48.6
MD03G1222200 Malus domestica HOM05D004029 ORTHO05D004613 1.7e-22 109.8 107 47.7
HPP92_027774 Vanilla planifolia HOM05D004029 ORTHO05D004613 1.7e-22 109.8 123 44.7
CANSAT11G2434 Cannabis sativa HOM05D004029 ORTHO05D004613 2.3e-22 109.4 107 46.7
Ciclev10007273m.g Citrus clementina HOM05D004029 ORTHO05D004613 2.3e-22 109.4 107 45.8
Lj3g0020332 Lotus japonicus HOM05D004029 ORTHO05D004613 2.3e-22 109.4 107 44.9
Hund02202 Selenicereus undatus HOM05D004029 ORTHO05D004613 2.3e-22 109.4 107 49.5
Ah.06g183680 Amaranthus hybridus HOM05D004029 ORTHO05D004613 2.9e-22 109.0 107 49.5
COL.COLO4_03559 Corchorus olitorius HOM05D004029 ORTHO05D004613 2.9e-22 109.0 107 47.7
Duzib268G1628 Durio zibethinus HOM05D004029 ORTHO05D004613 2.9e-22 109.0 107 47.7
Thecc.07G074600 Theobroma cacao HOM05D004029 ORTHO05D004613 2.9e-22 109.0 107 47.7
arahy.Tifrunner.gnm1.ann1.3J4V9H Arachis hypogaea HOM05D004029 ORTHO05D004613 3.9e-22 108.6 107 43.9
CiPaw.11G174500 Carya illinoinensis HOM05D004029 ORTHO05D004613 3.9e-22 108.6 107 46.7
Eucgr.F03341 Eucalyptus grandis HOM05D004029 ORTHO05D004613 3.9e-22 108.6 107 45.8
Gohir.A01G067000 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.9e-22 108.6 107 47.7
Gohir.D01G054200 Gossypium hirsutum HOM05D004029 ORTHO05D004613 3.9e-22 108.6 107 47.7
Gorai.002G074000 Gossypium raimondii HOM05D004029 ORTHO05D004613 3.9e-22 108.6 107 47.7
TWI38G0763 Tripterygium wilfordii HOM05D004029 ORTHO05D004613 3.9e-22 108.6 107 48.6
Cfa020529 Carpinus fangiana HOM05D004029 ORTHO05D004613 5.0e-22 108.2 107 45.8
HanXRQChr10g0289491 Helianthus annuus HOM05D004029 ORTHO05D004613 5.0e-22 108.2 107 47.7
MD11G1239600 Malus domestica HOM05D004029 ORTHO05D004613 5.0e-22 108.2 107 46.7
Nitab4.5_0001204g0130 Nicotiana tabacum HOM05D004029 ORTHO05D004613 5.0e-22 108.2 87 58.6
Prupe.4G187500 Prunus persica HOM05D004029 ORTHO05D004613 5.0e-22 108.2 107 46.7
THA.LOC104811852 Tarenaya hassleriana HOM05D004029 ORTHO05D004613 5.0e-22 108.2 119 42.9
Duzib213G0443 Durio zibethinus HOM05D004029 ORTHO05D004613 6.6e-22 107.8 107 47.7
QL08p019114 Quercus lobata HOM05D004029 ORTHO05D004613 6.6e-22 107.8 107 46.7
HPP92_020359 Vanilla planifolia HOM05D004029 ORTHO05D004613 8.6e-22 107.5 107 45.8
Nitab4.5_0000815g0060 Nicotiana tabacum HOM05D004029 ORTHO05D004613 1.1e-21 107.1 87 57.5
arahy.Tifrunner.gnm1.ann1.IWX37I Arachis hypogaea HOM05D004029 ORTHO05D004613 1.5e-21 106.7 98 46.9
EL10Ac4g08092 Beta vulgaris HOM05D004029 ORTHO05D004613 1.5e-21 106.7 107 46.7
Dinv22372 Davidia involucrata HOM05D004029 ORTHO05D004613 1.5e-21 106.7 107 49.5
Psat5g246120 Pisum sativum HOM05D004029 ORTHO05D004613 1.5e-21 106.7 107 44.9
Mapoly0031s0138 Marchantia polymorpha HOM05D004029 ORTHO05D004613 1.9e-21 106.3 107 44.9
Aqoxy7G04099 Aquilegia oxysepala HOM05D004029 ORTHO05D004613 2.5e-21 105.9 107 45.8
Ca_01815_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 2.5e-21 105.9 107 43.9
Ca_30535_v3 Cicer arietinum L. HOM05D004029 ORTHO05D004613 2.5e-21 105.9 107 43.9
TAR627G0431 Trochodendron aralioides HOM05D004029 ORTHO05D004613 2.5e-21 105.9 107 46.7
ECA240G1154 Erigeron canadensis HOM05D004029 ORTHO05D004613 3.3e-21 105.5 107 46.7
RcHm_v2.0_Chr5g0034971 Rosa chinensis HOM05D004029 ORTHO05D004613 3.3e-21 105.5 119 42.9
BcaC03g14313 Brassica carinata HOM05D004029 ORTHO05D004613 4.3e-21 105.1 119 42.9
A02p10290 Brassica napus HOM05D004029 ORTHO05D004613 4.3e-21 105.1 119 42.9
C02p17030 Brassica napus HOM05D004029 ORTHO05D004613 4.3e-21 105.1 119 42.9
BolC2t07800H Brassica oleracea HOM05D004029 ORTHO05D004613 4.3e-21 105.1 119 42.9
FvH4_3g20750 Fragaria vesca HOM05D004029 ORTHO05D004613 4.3e-21 105.1 107 45.8
FAN11G1114 Fragaria x ananassa HOM05D004029 ORTHO05D004613 4.3e-21 105.1 107 45.8
FAN16G1973 Fragaria x ananassa HOM05D004029 ORTHO05D004613 4.3e-21 105.1 107 45.8
FAN21G1497 Fragaria x ananassa HOM05D004029 ORTHO05D004613 4.3e-21 105.1 107 45.8
FAN25G1694 Fragaria x ananassa HOM05D004029 ORTHO05D004613 4.3e-21 105.1 107 45.8
AUR62015624 Chenopodium quinoa HOM05D004029 ORTHO05D004613 5.6e-21 104.8 107 46.7
AUR62029337 Chenopodium quinoa HOM05D004029 ORTHO05D004613 5.6e-21 104.8 107 46.7
Gohir.1Z049674 Gossypium hirsutum HOM05D004029 ORTHO05D004613 5.6e-21 104.8 90 54.4
Os12g0554400 Oryza sativa ssp. japonica HOM05D004029 ORTHO05D004613 5.6e-21 104.8 107 46.7
Lalb_Chr25g0286611 Lupinus albus HOM05D004029 ORTHO05D004613 7.3e-21 104.4 107 43.9
Manes.03G114700 Manihot esculenta HOM05D004029 ORTHO05D004613 9.5e-21 104.0 107 45.8
PSO541G4143 Papaver somniferum HOM05D004029 ORTHO05D004613 9.5e-21 104.0 119 41.2
PSO675G2841 Papaver somniferum HOM05D004029 ORTHO05D004613 9.5e-21 104.0 119 41.2
Actinidia05171 Actinidia chinensis HOM05D004029 ORTHO05D004613 1.2e-20 103.6 107 44.9
Thhalv10012467m.g Eutrema salsugineum HOM05D004029 ORTHO05D004613 1.2e-20 103.6 119 42.0
ClCG11G018320 Citrullus lanatus HOM05D004029 ORTHO05D004613 1.6e-20 103.2 83 57.8
Sp6g16420 Schrenkiella parvula HOM05D004029 ORTHO05D004613 1.6e-20 103.2 119 42.0
C09p44730 Brassica napus HOM05D004029 ORTHO05D004613 2.8e-20 102.4 119 42.0
BraA02t06097Z Brassica rapa HOM05D004029 ORTHO05D004613 2.8e-20 102.4 119 42.0
BcaB05g22133 Brassica carinata HOM05D004029 ORTHO05D004613 3.6e-20 102.1 119 41.2
Gorai.007G319300 Gossypium raimondii HOM05D004029 ORTHO05D004613 3.6e-20 102.1 98 49.0
Rhsim06G0193700 Rhododendron simsii HOM05D004029 ORTHO05D004613 3.6e-20 102.1 89 52.8
Rhsim06G0194500 Rhododendron simsii HOM05D004029 ORTHO05D004613 3.6e-20 102.1 89 52.8
Zm00001eb137170 Zea mays HOM05D004029 ORTHO05D004613 3.6e-20 102.1 107 43.9
AT5G54440 Arabidopsis thaliana HOM05D004029 ORTHO05D004613 6.1e-20 101.3 119 42.0
BcaB08g35795 Brassica carinata HOM05D004029 ORTHO05D004613 6.1e-20 101.3 119 41.2
BcaC04g20340 Brassica carinata HOM05D004029 ORTHO05D004613 6.1e-20 101.3 119 41.2
BolC9t57346H Brassica oleracea HOM05D004029 ORTHO05D004613 6.1e-20 101.3 119 41.2
CARHR267710 Cardamine hirsuta HOM05D004029 ORTHO05D004613 6.1e-20 101.3 119 41.2
Carub.0008s1474 Capsella rubella HOM05D004029 ORTHO05D004613 8.0e-20 100.9 119 42.0
vmacro11822 Vaccinium macrocarpon HOM05D004029 ORTHO05D004613 8.0e-20 100.9 86 54.7
BraA10t43261Z Brassica rapa HOM05D004029 ORTHO05D004613 3.1e-19 99.0 120 42.5
Aa31LG3G10350 Aethionema arabicum HOM05D004029 ORTHO05D004613 4.0e-19 98.6 119 41.2
Lalb_Chr01g0016971 Lupinus albus HOM05D004029 ORTHO05D004613 4.0e-19 98.6 107 42.1
SEGI_16455 Sequoiadendron giganteum HOM05D004029 ORTHO05D004613 5.2e-19 98.2 79 53.2
A10p11660 Brassica napus HOM05D004029 ORTHO05D004613 8.9e-19 97.4 108 45.4
Psat3g119680 Pisum sativum HOM05D004029 ORTHO05D004613 8.9e-19 97.4 107 42.1
Haze_09504 Corylus avellana HOM05D004029 ORTHO05D004613 1.2e-18 97.1 86 51.2
Psat7g242400 Pisum sativum HOM05D004029 ORTHO05D004613 3.4e-18 95.5 98 44.9
HanXRQChr13g0386411 Helianthus annuus HOM05D004029 ORTHO05D004613 7.5e-18 94.4 107 43.0
ECA236G3046 Erigeron canadensis HOM05D004029 ORTHO05D004613 7.0e-16 87.8 76 55.3
SHI21494 Sapria himalayana HOM05D004029 ORTHO05D004613 1.3e-14 83.6 86 46.5
AagrBONN_evm.TU.Sc2ySwM_344.2130 Anthoceros agrestis HOM05D004029 ORTHO05D004613 5.0e-14 81.6 92 44.6
Pp3c26_12060 Physcomitrium patens HOM05D004029 ORTHO05D004613 1.1e-11 73.9 87 42.5
Pp3c3_4080 Physcomitrium patens HOM05D004029 ORTHO05D004613 3.0e-06 55.8 78 41.0


User provided reference genes

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