Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g47994 Chara braunii HOM05D006614 ORTHO05D008217 0.0e+00 1209.9 620 100.0
SEGI_22211 Sequoiadendron giganteum HOM05D006614 ORTHO05D008217 9.2e-23 112.8 224 30.4
TWI38G0322 Tripterygium wilfordii HOM05D006614 ORTHO05D008217 1.3e-21 109.0 232 28.4
Pp3c16_3160 Physcomitrium patens HOM05D006614 ORTHO05D008217 1.7e-21 108.6 283 29.0
Migut.M00728 Erythranthe guttata HOM05D006614 ORTHO05D008217 3.0e-21 107.8 162 33.3
HanXRQChr15g0476201 Helianthus annuus HOM05D006614 ORTHO05D008217 5.0e-21 107.1 232 28.4
unitig_747.g21586 Utricularia gibba HOM05D006614 ORTHO05D008217 1.1e-20 105.9 232 28.0
Zm00001eb078480 Zea mays HOM05D006614 ORTHO05D008217 1.5e-20 105.5 329 26.7
Peaxi162Scf00111g01423 Petunia axillaris HOM05D006614 ORTHO05D008217 4.3e-20 104.0 232 29.3
Carub.0003s1456 Capsella rubella HOM05D006614 ORTHO05D008217 7.3e-20 103.2 233 27.9
vmacro11940 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 9.5e-20 102.8 161 32.3
vmacro23466 Vaccinium macrocarpon HOM05D006614 ORTHO05D008217 9.5e-20 102.8 273 27.1
Cpa.g.sc77.8 Carica papaya HOM05D006614 ORTHO05D008217 1.2e-19 102.4 232 26.7
CAN.G375.15 Capsicum annuum HOM05D006614 ORTHO05D008217 1.6e-19 102.1 235 30.2
LjContig00141g0022614 Lotus japonicus HOM05D006614 ORTHO05D008217 1.6e-19 102.1 232 28.0
Sed0001562 Sechium edule HOM05D006614 ORTHO05D008217 1.6e-19 102.1 234 28.2
AL3G27220 Arabidopsis lyrata HOM05D006614 ORTHO05D008217 2.1e-19 101.7 233 27.5
CiPaw.11G160300 Carya illinoinensis HOM05D006614 ORTHO05D008217 2.1e-19 101.7 233 30.0
Thhalv10022322m.g Eutrema salsugineum HOM05D006614 ORTHO05D008217 2.1e-19 101.7 233 27.0
CARHR089840 Cardamine hirsuta HOM05D006614 ORTHO05D008217 2.8e-19 101.3 233 27.5
ClCG11G017450 Citrullus lanatus HOM05D006614 ORTHO05D008217 2.8e-19 101.3 162 32.1
DCAR_021025 Daucus carota HOM05D006614 ORTHO05D008217 2.8e-19 101.3 232 27.2
Os04g0497900 Oryza sativa ssp. japonica HOM05D006614 ORTHO05D008217 2.8e-19 101.3 334 25.4
CsaV3_4G033120 Cucumis sativus L. HOM05D006614 ORTHO05D008217 3.6e-19 100.9 258 26.4
Rhsim06G0208100 Rhododendron simsii HOM05D006614 ORTHO05D008217 3.6e-19 100.9 161 32.3
Solyc07g062440.1 Solanum lycopersicum HOM05D006614 ORTHO05D008217 3.6e-19 100.9 232 27.6
AagrBONN_evm.TU.Sc2ySwM_228.5094 Anthoceros agrestis HOM05D006614 ORTHO05D008217 4.7e-19 100.5 223 29.6
AT3G14900 Arabidopsis thaliana HOM05D006614 ORTHO05D008217 4.7e-19 100.5 233 27.5
Sopen07g030680 Solanum pennellii HOM05D006614 ORTHO05D008217 4.7e-19 100.5 232 28.4
TAR375G0652 Trochodendron aralioides HOM05D006614 ORTHO05D008217 4.7e-19 100.5 161 33.5
Atru.chr2.2145 Acer truncatum HOM05D006614 ORTHO05D008217 6.2e-19 100.1 175 30.9
MELO3C025640.2 Cucumis melo HOM05D006614 ORTHO05D008217 6.2e-19 100.1 259 27.0
ATR0810G004 Amborella trichopoda HOM05D006614 ORTHO05D008217 8.0e-19 99.8 231 28.1
ECA240G1555 Erigeron canadensis HOM05D006614 ORTHO05D008217 8.0e-19 99.8 162 32.1
MBI12_g10753_MAGBIO Magnolia biondii HOM05D006614 ORTHO05D008217 8.0e-19 99.8 162 33.3
SalBow5G0223 Salvia bowleyana HOM05D006614 ORTHO05D008217 8.0e-19 99.8 161 31.7
PGSC0003DMG400046940 Solanum tuberosum HOM05D006614 ORTHO05D008217 8.0e-19 99.8 232 28.4
MSTRG.6677 Avicennia marina HOM05D006614 ORTHO05D008217 1.4e-18 99.0 232 27.6
Cc05_g11080 Coffea canephora HOM05D006614 ORTHO05D008217 1.4e-18 99.0 232 30.2
Dinv14994 Davidia involucrata HOM05D006614 ORTHO05D008217 1.4e-18 99.0 162 34.0
Glyma.14G066300 Glycine max HOM05D006614 ORTHO05D008217 1.4e-18 99.0 233 28.3
PGR142G0467 Punica granatum HOM05D006614 ORTHO05D008217 1.4e-18 99.0 276 26.1
BcaB06g29517 Brassica carinata HOM05D006614 ORTHO05D008217 1.8e-18 98.6 233 27.0
C05p52250 Brassica napus HOM05D006614 ORTHO05D008217 1.8e-18 98.6 233 27.0
BolC5t33914H Brassica oleracea HOM05D006614 ORTHO05D008217 1.8e-18 98.6 233 27.0
Cfa019566 Carpinus fangiana HOM05D006614 ORTHO05D008217 1.8e-18 98.6 162 33.3
Nitab4.5_0006953g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 1.8e-18 98.6 232 28.4
SMO356G0760 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 1.8e-18 98.6 229 24.9
A05p34510 Brassica napus HOM05D006614 ORTHO05D008217 2.3e-18 98.2 233 28.3
BraA05t22271Z Brassica rapa HOM05D006614 ORTHO05D008217 2.3e-18 98.2 233 28.3
Nitab4.5_0003565g0010 Nicotiana tabacum HOM05D006614 ORTHO05D008217 2.3e-18 98.2 161 32.9
Lj1P829T27 Lonicera japonica HOM05D006614 ORTHO05D008217 3.1e-18 97.8 232 28.4
BcaB06g25331 Brassica carinata HOM05D006614 ORTHO05D008217 4.0e-18 97.4 376 26.1
SGA_v2.0_scaffold34G13782 Striga asiatica HOM05D006614 ORTHO05D008217 4.0e-18 97.4 165 30.9
VMungo0647G0674 Vigna mungo HOM05D006614 ORTHO05D008217 4.0e-18 97.4 232 28.0
Manes.15G094800 Manihot esculenta HOM05D006614 ORTHO05D008217 5.2e-18 97.1 161 29.8
Sp3g13110 Schrenkiella parvula HOM05D006614 ORTHO05D008217 5.2e-18 97.1 276 26.1
Eucgr.K01881 Eucalyptus grandis HOM05D006614 ORTHO05D008217 6.8e-18 96.7 268 27.6
SMO356G0609 Selaginella moellendorffii HOM05D006614 ORTHO05D008217 8.9e-18 96.3 229 24.5
Ca_05900_v3 Cicer arietinum L. HOM05D006614 ORTHO05D008217 1.2e-17 95.9 232 25.9
arahy.Tifrunner.gnm1.ann1.087IU6 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.5e-17 95.5 161 32.3
arahy.Tifrunner.gnm1.ann1.UH0U35 Arachis hypogaea HOM05D006614 ORTHO05D008217 1.5e-17 95.5 161 32.3
Actinidia12578 Actinidia chinensis HOM05D006614 ORTHO05D008217 2.0e-17 95.1 161 31.7
Mapoly0097s0086 Marchantia polymorpha HOM05D006614 ORTHO05D008217 2.0e-17 95.1 277 28.5
CANSAT35G1108 Cannabis sativa HOM05D006614 ORTHO05D008217 3.4e-17 94.4 234 27.8
Oeu061358.1 Olea europaea HOM05D006614 ORTHO05D008217 3.4e-17 94.4 161 30.4
Haze_09323 Corylus avellana HOM05D006614 ORTHO05D008217 4.4e-17 94.0 162 32.1
CSS0027020 Camellia sinensis var. sinensis HOM05D006614 ORTHO05D008217 5.8e-17 93.6 162 31.5
Medtr5g080700 Medicago truncatula HOM05D006614 ORTHO05D008217 5.8e-17 93.6 232 25.4
Phvul.008G231100 Phaseolus vulgaris HOM05D006614 ORTHO05D008217 5.8e-17 93.6 278 27.3
Psat2g179000 Pisum sativum HOM05D006614 ORTHO05D008217 5.8e-17 93.6 274 25.5
Potri.001G390600 Populus trichocarpa HOM05D006614 ORTHO05D008217 5.8e-17 93.6 164 29.3
Sabra16G0256000 Salix brachista HOM05D006614 ORTHO05D008217 5.8e-17 93.6 270 25.9
HPP92_015867 Vanilla planifolia HOM05D006614 ORTHO05D008217 5.8e-17 93.6 287 24.7
Aa31LG8G2110 Aethionema arabicum HOM05D006614 ORTHO05D008217 7.5e-17 93.2 233 26.2
Sc16g0007600 Simmondsia chinensis HOM05D006614 ORTHO05D008217 7.5e-17 93.2 270 27.4
TPR.G25839 Trifolium pratense HOM05D006614 ORTHO05D008217 9.8e-17 92.8 162 30.2
MD03G1243600 Malus domestica HOM05D006614 ORTHO05D008217 1.3e-16 92.4 255 28.2
Hma1.2p1_0290F.1_g114830 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.7e-16 92.0 272 27.2
Hma1.2p1_0290F.1_g114840 Hydrangea macrophylla HOM05D006614 ORTHO05D008217 1.7e-16 92.0 272 27.2
Aqoxy1G00012 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.9e-16 91.3 164 33.5
CDE12G0873 Ceratophyllum demersum HOM05D006614 ORTHO05D008217 2.9e-16 91.3 163 31.9
Duzib213G0629 Durio zibethinus HOM05D006614 ORTHO05D008217 2.9e-16 91.3 162 31.5
FvH4_3g18290 Fragaria vesca HOM05D006614 ORTHO05D008217 2.9e-16 91.3 233 25.8
FAN16G2994 Fragaria x ananassa HOM05D006614 ORTHO05D008217 2.9e-16 91.3 233 25.8
Lalb_Chr17g0346371 Lupinus albus HOM05D006614 ORTHO05D008217 2.9e-16 91.3 336 25.6
COL.COLO4_17543 Corchorus olitorius HOM05D006614 ORTHO05D008217 3.7e-16 90.9 162 31.5
Prupe.4G164700 Prunus persica HOM05D006614 ORTHO05D008217 3.7e-16 90.9 255 27.5
RcHm_v2.0_Chr5g0030921 Rosa chinensis HOM05D006614 ORTHO05D008217 3.7e-16 90.9 233 26.6
Ah.09g230960 Amaranthus hybridus HOM05D006614 ORTHO05D008217 4.9e-16 90.5 162 32.1
FAN11G1715 Fragaria x ananassa HOM05D006614 ORTHO05D008217 4.9e-16 90.5 233 25.8
PSO063G1163 Papaver somniferum HOM05D006614 ORTHO05D008217 8.3e-16 89.7 161 30.4
Thecc.07G116400 Theobroma cacao HOM05D006614 ORTHO05D008217 1.9e-15 88.6 232 26.7
Gorai.001G269000 Gossypium raimondii HOM05D006614 ORTHO05D008217 3.2e-15 87.8 162 30.2
AUR62010952 Chenopodium quinoa HOM05D006614 ORTHO05D008217 5.4e-15 87.0 233 26.2
PSO421G0295 Papaver somniferum HOM05D006614 ORTHO05D008217 5.4e-15 87.0 161 28.0
Gohir.D07G233600 Gossypium hirsutum HOM05D006614 ORTHO05D008217 7.0e-15 86.7 263 25.1
QL12p002313 Quercus lobata HOM05D006614 ORTHO05D008217 7.0e-15 86.7 172 29.7
Thecc.07G117000 Theobroma cacao HOM05D006614 ORTHO05D008217 7.0e-15 86.7 162 30.2
GSVIVG01014198001 Vitis vinifera HOM05D006614 ORTHO05D008217 7.0e-15 86.7 265 28.7
THA.LOC104822565 Tarenaya hassleriana HOM05D006614 ORTHO05D008217 1.6e-14 85.5 335 24.2
EL10Ac8g18445 Beta vulgaris HOM05D006614 ORTHO05D008217 4.6e-14 84.0 163 30.1
AUR62021467 Chenopodium quinoa HOM05D006614 ORTHO05D008217 4.6e-14 84.0 233 25.8
Aqoxy3G00116 Aquilegia oxysepala HOM05D006614 ORTHO05D008217 2.5e-12 78.2 110 37.3
Gohir.A07G226400 Gossypium hirsutum HOM05D006614 ORTHO05D008217 2.5e-12 78.2 369 23.0
Psat0s3066g0080 Pisum sativum HOM05D006614 ORTHO05D008217 1.3e-08 65.9 242 26.0


User provided reference genes

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