Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g47100 Chara braunii HOM05D013443 ORTHO05D000146 5.8e-124 447.6 227 100.0
CBR_g47098 Chara braunii HOM05D013443 ORTHO05D000146 1.9e-82 309.7 212 78.3
CBR_g47097 Chara braunii HOM05D013443 ORTHO05D000146 6.0e-81 304.7 215 79.5
CBR_g20110 Chara braunii HOM05D013443 ORTHO05D000146 1.7e-51 206.8 203 59.1
CBR_g39547 Chara braunii HOM05D013443 ORTHO05D000146 1.7e-46 190.3 204 54.4
CBR_g46312 Chara braunii HOM05D013443 ORTHO05D000146 8.3e-22 108.2 209 34.9
CBR_g46321 Chara braunii HOM05D013443 ORTHO05D000146 1.6e-20 104.0 194 37.6
CBR_g38934 Chara braunii HOM05D005309 ORTHO05D006648 2.2e-14 83.6 202 35.6
Pp3c16_11450 Physcomitrium patens HOM05D000950 ORTHO05D000774 1.1e-13 81.3 172 33.1
AagrBONN_evm.TU.Sc2ySwM_117.23 Anthoceros agrestis HOM05D000950 ORTHO05D000146 1.1e-10 71.2 246 30.1
CBR_g8676 Chara braunii HOM05D007240 ORTHO05D003552 1.1e-10 71.2 223 27.8
Thhalv10010582m.g Eutrema salsugineum HOM05D000950 ORTHO05D000774 1.1e-10 71.2 189 28.6
Sp5g09320 Schrenkiella parvula HOM05D000950 ORTHO05D000774 1.1e-10 71.2 190 28.9
A09p46060 Brassica napus HOM05D000950 ORTHO05D000774 4.3e-10 69.3 186 28.5
Psat6g137880 Pisum sativum HOM05D000248 ORTHO05D000146 5.6e-10 68.9 194 30.9
BraA09t40070Z Brassica rapa HOM05D000950 ORTHO05D000774 7.3e-10 68.6 186 28.5
BcaB01g00318 Brassica carinata HOM05D000950 ORTHO05D000774 9.5e-10 68.2 181 28.7
BcaC07g39663 Brassica carinata HOM05D000950 ORTHO05D000774 9.5e-10 68.2 186 28.0
C08p28310 Brassica napus HOM05D000950 ORTHO05D000774 9.5e-10 68.2 186 28.0
BolC8t50440H Brassica oleracea HOM05D000950 ORTHO05D000774 9.5e-10 68.2 186 28.0
Aa31LG10G8210 Aethionema arabicum HOM05D000950 ORTHO05D000774 1.2e-09 67.8 189 28.0
CBR_g8677 Chara braunii HOM05D013443 ORTHO05D000146 1.2e-09 67.8 234 31.2
Mapoly0007s0161 Marchantia polymorpha HOM05D000950 ORTHO05D000774 1.6e-09 67.4 183 28.4
AL5G33810 Arabidopsis lyrata HOM05D000950 ORTHO05D000774 2.1e-09 67.0 189 28.6
AT3G53000 Arabidopsis thaliana HOM05D000950 ORTHO05D000774 2.1e-09 67.0 189 28.6
Carub.0005s1950 Capsella rubella HOM05D000950 ORTHO05D000774 3.6e-09 66.2 189 28.0
Zm00001eb319000 Zea mays HOM05D000950 ORTHO05D000774 6.2e-09 65.5 181 29.3
AagrBONN_evm.TU.Sc2ySwM_228.227 Anthoceros agrestis HOM05D000950 ORTHO05D000774 8.0e-09 65.1 203 28.6
PSO675G2500 Papaver somniferum HOM05D000248 ORTHO05D000146 8.0e-09 65.1 190 29.5
THA.LOC104827492 Tarenaya hassleriana HOM05D000950 ORTHO05D000774 8.0e-09 65.1 186 28.5
A02p32770 Brassica napus HOM05D000248 ORTHO05D000146 1.0e-08 64.7 167 31.1
BraA02t08292Z Brassica rapa HOM05D000248 ORTHO05D000146 1.0e-08 64.7 167 31.1
CBR_g11028 Chara braunii HOM05D013443 ORTHO05D000146 1.0e-08 64.7 93 35.5
ECA236G0152 Erigeron canadensis HOM05D000950 ORTHO05D000774 1.0e-08 64.7 197 28.9
TPR.G14652 Trifolium pratense HOM05D000248 ORTHO05D000146 1.4e-08 64.3 193 31.6
Ca_09990_v3 Cicer arietinum L. HOM05D000248 ORTHO05D000146 2.3e-08 63.5 198 28.8
Lsat_1_v5_gn_2_16181 Lactuca sativa HOM05D000248 ORTHO05D000146 2.3e-08 63.5 192 28.1
PGR004G0020 Punica granatum HOM05D000950 ORTHO05D000774 2.3e-08 63.5 182 28.0
Medtr1g079140 Medicago truncatula HOM05D000248 ORTHO05D000146 4.0e-08 62.8 194 30.9
PSO017G0732 Papaver somniferum HOM05D000248 ORTHO05D000146 6.8e-08 62.0 186 29.6
Gohir.A09G052240 Gossypium hirsutum HOM05D000248 ORTHO05D000146 8.9e-08 61.6 185 28.1
Gorai.006G056400 Gossypium raimondii HOM05D000248 ORTHO05D000146 1.2e-07 61.2 191 28.8
HanXRQChr05g0156951 Helianthus annuus HOM05D000248 ORTHO05D000146 1.5e-07 60.8 187 28.3
Sed0002591 Sechium edule HOM05D000248 ORTHO05D000146 1.5e-07 60.8 189 27.5
vmacro10402 Vaccinium macrocarpon HOM05D000248 ORTHO05D000146 1.5e-07 60.8 190 28.4
arahy.Tifrunner.gnm1.ann1.KY5LXX Arachis hypogaea HOM05D000248 ORTHO05D000146 2.0e-07 60.5 182 27.5
CSS0005023 Camellia sinensis var. sinensis HOM05D000248 ORTHO05D000146 2.0e-07 60.5 159 28.9
Cc09_g03230 Coffea canephora HOM05D000248 ORTHO05D000146 2.0e-07 60.5 177 28.2
Gohir.A08G224500 Gossypium hirsutum HOM05D000248 ORTHO05D000146 3.4e-07 59.7 209 27.3
Os09g0525300 Oryza sativa ssp. japonica HOM05D000950 ORTHO05D000774 3.4e-07 59.7 178 28.1
Dinv06644 Davidia involucrata HOM05D000248 ORTHO05D000146 4.4e-07 59.3 193 26.4
Gohir.D08G244800 Gossypium hirsutum HOM05D000248 ORTHO05D000146 4.4e-07 59.3 190 28.4
HanXRQChr05g0143321 Helianthus annuus HOM05D000248 ORTHO05D000146 4.4e-07 59.3 184 27.2
HanXRQChr17g0559131 Helianthus annuus HOM05D000248 ORTHO05D000146 4.4e-07 59.3 190 26.8
MELO3C008578.2 Cucumis melo HOM05D000248 ORTHO05D000146 5.8e-07 58.9 213 26.8
arahy.Tifrunner.gnm1.ann1.N1E5J3 Arachis hypogaea HOM05D000248 ORTHO05D000146 7.5e-07 58.5 200 28.0
Gorai.004G261300 Gossypium raimondii HOM05D000248 ORTHO05D000146 9.8e-07 58.2 209 27.3
BcaC06g31240 Brassica carinata HOM05D000248 ORTHO05D000146 1.3e-06 57.8 176 29.0
CBR_g20277 Chara braunii HOM05D000950 ORTHO05D000774 1.3e-06 57.8 140 29.3
BraA06t27249Z Brassica rapa HOM05D000248 ORTHO05D000146 1.7e-06 57.4 177 28.2
Thecc.05G202200 Theobroma cacao HOM05D000248 ORTHO05D000146 1.7e-06 57.4 200 27.0
unitig_749.g14309 Utricularia gibba HOM05D000950 ORTHO05D000774 1.7e-06 57.4 192 27.6
BcaC06g34061 Brassica carinata HOM05D000248 ORTHO05D000146 2.2e-06 57.0 176 28.4
BolC7t43823H Brassica oleracea HOM05D000248 ORTHO05D000146 2.2e-06 57.0 176 28.4
CBR_g4852 Chara braunii HOM05D013443 ORTHO05D000146 2.2e-06 57.0 242 26.9
unitig_26.g9260 Utricularia gibba HOM05D000950 ORTHO05D000774 2.2e-06 57.0 207 26.6
A06p43680 Brassica napus HOM05D000248 ORTHO05D000146 2.9e-06 56.6 177 28.8
BolC2t11125H Brassica oleracea HOM05D000248 ORTHO05D000146 2.9e-06 56.6 153 29.4
CsaV3_2G010420 Cucumis sativus L. HOM05D000248 ORTHO05D000146 2.9e-06 56.6 194 29.4
CiPaw.07G076300 Carya illinoinensis HOM05D000248 ORTHO05D000146 3.7e-06 56.2 184 28.8
COL.COLO4_12617 Corchorus olitorius HOM05D000950 ORTHO05D000774 3.7e-06 56.2 181 26.0
COL.COLO4_20293 Corchorus olitorius HOM05D000248 ORTHO05D000146 3.7e-06 56.2 181 27.6
Duzib212G0080 Durio zibethinus HOM05D000248 ORTHO05D000146 3.7e-06 56.2 186 26.9
Lsat_1_v5_gn_2_23501 Lactuca sativa HOM05D000950 ORTHO05D000774 3.7e-06 56.2 179 26.8
SalBow3G1014 Salvia bowleyana HOM05D000248 ORTHO05D000146 3.7e-06 56.2 168 29.2
AL5G11560 Arabidopsis lyrata HOM05D000248 ORTHO05D000146 4.9e-06 55.8 183 29.0
C07p33150 Brassica napus HOM05D000248 ORTHO05D000146 4.9e-06 55.8 176 27.8
Ca_09974_v3 Cicer arietinum L. HOM05D000248 ORTHO05D000146 4.9e-06 55.8 194 25.8
AT2G02340 Arabidopsis thaliana HOM05D000248 ORTHO05D000146 6.4e-06 55.5 155 29.7
arahy.Tifrunner.gnm1.ann1.IM6RX7 Arachis hypogaea HOM05D000248 ORTHO05D000146 6.4e-06 55.5 200 27.5
PGSC0003DMG400023354 Solanum tuberosum HOM05D000248 ORTHO05D000146 6.4e-06 55.5 202 26.7
Peaxi162Scf00156g00619 Petunia axillaris HOM05D000248 ORTHO05D000146 8.3e-06 55.1 189 28.6


User provided reference genes

Program Settings