Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g46834 Chara braunii HOM05D003862 ORTHO05D004398 4.8e-45 184.1 91 100.0
Dinv17003 Davidia involucrata HOM05D003862 ORTHO05D004398 3.1e-28 128.3 94 66.0
Dinv42952 Davidia involucrata HOM05D003862 ORTHO05D004398 3.1e-28 128.3 94 66.0
Dinv43148 Davidia involucrata HOM05D003862 ORTHO05D004398 3.1e-28 128.3 94 66.0
Hma1.2p1_0936F.1_g238710 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 4.0e-28 127.9 94 67.0
Hma1.2p1_1513F.1_g287975 Hydrangea macrophylla HOM05D003862 ORTHO05D004398 4.0e-28 127.9 94 67.0
SalBow5G2575 Salvia bowleyana HOM05D003862 ORTHO05D004398 4.0e-28 127.9 94 66.0
TAR369G0814 Trochodendron aralioides HOM05D003862 ORTHO05D004398 4.0e-28 127.9 94 64.9
Cc10_g12100 Coffea canephora HOM05D003862 ORTHO05D004398 5.3e-28 127.5 94 66.0
Lsat_1_v5_gn_4_177081 Lactuca sativa HOM05D003862 ORTHO05D004398 5.3e-28 127.5 94 67.0
Lsat_1_v5_gn_5_170681 Lactuca sativa HOM05D003862 ORTHO05D004398 5.3e-28 127.5 94 67.0
AagrBONN_evm.TU.Sc2ySwM_368.1516 Anthoceros agrestis HOM05D003862 ORTHO05D004398 6.9e-28 127.1 91 64.8
unitig_744.g24379 Utricularia gibba HOM05D003862 ORTHO05D004398 6.9e-28 127.1 93 64.5
HPP92_018126 Vanilla planifolia HOM05D003862 ORTHO05D004398 1.2e-27 126.3 94 66.0
HPP92_018144 Vanilla planifolia HOM05D003862 ORTHO05D004398 1.2e-27 126.3 94 66.0
CSS0028919 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.5e-27 125.9 94 64.9
CSS0038231 Camellia sinensis var. sinensis HOM05D003862 ORTHO05D004398 1.5e-27 125.9 94 64.9
Oeu014415.1 Olea europaea HOM05D003862 ORTHO05D004398 1.5e-27 125.9 94 64.9
unitig_21.g20465 Utricularia gibba HOM05D003164 ORTHO05D003575 1.5e-27 125.9 93 64.5
Migut.D00467 Erythranthe guttata HOM05D003862 ORTHO05D004398 2.0e-27 125.6 94 64.9
EL10Ac5g11591 Beta vulgaris HOM05D003862 ORTHO05D004398 2.6e-27 125.2 94 66.0
GSVIVG01024961001 Vitis vinifera HOM05D003862 ORTHO05D004398 2.6e-27 125.2 94 64.9
Migut.D01636 Erythranthe guttata HOM05D003862 ORTHO05D004398 3.4e-27 124.8 94 64.9
Oeu032100.1 Olea europaea HOM05D003862 ORTHO05D004398 3.4e-27 124.8 94 63.8
HanXRQChr05g0136091 Helianthus annuus HOM05D003862 ORTHO05D004398 4.5e-27 124.4 93 65.6
Os12g0571200 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 5.8e-27 124.0 94 63.8
TAR636G2804 Trochodendron aralioides HOM05D003862 ORTHO05D004398 5.8e-27 124.0 94 63.8
CAN.G1195.10 Capsicum annuum HOM05D003862 ORTHO05D004398 1.0e-26 123.2 94 66.0
Solyc10g086510.2 Solanum lycopersicum HOM05D003862 ORTHO05D004398 1.0e-26 123.2 94 66.0
Sopen10g035890 Solanum pennellii HOM05D003862 ORTHO05D004398 1.0e-26 123.2 94 66.0
PGSC0003DMG400019201 Solanum tuberosum HOM05D003862 ORTHO05D004398 1.0e-26 123.2 94 66.0
MBI05_g22042_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 1.3e-26 122.9 94 62.8
CDE07G2069 Ceratophyllum demersum HOM05D003862 ORTHO05D004398 1.7e-26 122.5 94 63.8
ECA248G1530 Erigeron canadensis HOM05D003862 ORTHO05D004398 1.7e-26 122.5 94 63.8
vmacro20157 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.7e-26 122.5 94 63.8
CiPaw.09G192600 Carya illinoinensis HOM05D003862 ORTHO05D004398 3.8e-26 121.3 94 63.8
Pp3c24_15930 Physcomitrium patens HOM05D003862 ORTHO05D004398 3.8e-26 121.3 91 62.6
AUR62038108 Chenopodium quinoa HOM05D003862 ORTHO05D004398 4.9e-26 120.9 94 63.8
THA.LOC104799442 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 4.9e-26 120.9 94 63.8
Cfa017379 Carpinus fangiana HOM05D003862 ORTHO05D004398 6.5e-26 120.6 94 62.8
AUR62025808 Chenopodium quinoa HOM05D003862 ORTHO05D004398 6.5e-26 120.6 94 63.8
Haze_20791 Corylus avellana HOM05D003862 ORTHO05D004398 6.5e-26 120.6 94 62.8
Gohir.D03G125700 Gossypium hirsutum HOM05D003862 ORTHO05D004398 6.5e-26 120.6 94 63.8
DCAR_030095 Daucus carota HOM05D003862 ORTHO05D004398 8.4e-26 120.2 94 62.8
Nitab4.5_0000349g0310 Nicotiana tabacum HOM05D003862 ORTHO05D004398 8.4e-26 120.2 94 62.8
Nitab4.5_0001911g0090 Nicotiana tabacum HOM05D003862 ORTHO05D004398 8.4e-26 120.2 94 62.8
Peaxi162Scf00330g00415 Petunia axillaris HOM05D003862 ORTHO05D004398 1.1e-25 119.8 94 61.7
Sc05g0009640 Simmondsia chinensis HOM05D003862 ORTHO05D004398 1.1e-25 119.8 94 61.7
Ah.02g115390 Amaranthus hybridus HOM05D003862 ORTHO05D004398 1.4e-25 119.4 94 62.8
PSO063G5647 Papaver somniferum HOM05D003862 ORTHO05D004398 1.4e-25 119.4 93 59.1
PSO339G2698 Papaver somniferum HOM05D003862 ORTHO05D004398 1.4e-25 119.4 93 59.1
PSO384G2795 Papaver somniferum HOM05D003862 ORTHO05D004398 1.4e-25 119.4 93 59.1
Hund10643 Selenicereus undatus HOM05D003862 ORTHO05D004398 1.4e-25 119.4 94 62.8
BcaC02g10413 Brassica carinata HOM05D003862 ORTHO05D004398 1.9e-25 119.0 94 62.8
C04p29160 Brassica napus HOM05D003862 ORTHO05D004398 1.9e-25 119.0 94 62.8
BolC4t24450H Brassica oleracea HOM05D003862 ORTHO05D004398 1.9e-25 119.0 94 62.8
Gohir.A03G042066 Gossypium hirsutum HOM05D003862 ORTHO05D004398 1.9e-25 119.0 94 62.8
THA.LOC104810779 Tarenaya hassleriana HOM05D003862 ORTHO05D004398 1.9e-25 119.0 94 62.8
Cfa011504 Carpinus fangiana HOM05D003862 ORTHO05D004398 2.5e-25 118.6 94 60.6
Gorai.003G131900 Gossypium raimondii HOM05D003862 ORTHO05D004398 2.5e-25 118.6 94 62.8
Mapoly0020s0168 Marchantia polymorpha HOM05D003862 ORTHO05D004398 2.5e-25 118.6 86 62.8
SMO367G0781 Selaginella moellendorffii HOM05D003862 ORTHO05D004398 2.5e-25 118.6 86 64.0
CiPaw.14G068400 Carya illinoinensis HOM05D003862 ORTHO05D004398 3.2e-25 118.2 94 60.6
Duzib168G1372 Durio zibethinus HOM05D003862 ORTHO05D004398 3.2e-25 118.2 94 62.8
Duzib170G0179 Durio zibethinus HOM05D003862 ORTHO05D004398 3.2e-25 118.2 94 62.8
Potri.012G039100 Populus trichocarpa HOM05D003862 ORTHO05D004398 3.2e-25 118.2 93 61.3
Sabra12G0027600 Salix brachista HOM05D003862 ORTHO05D004398 3.2e-25 118.2 93 61.3
Aa31LG4G15560 Aethionema arabicum HOM05D003862 ORTHO05D004398 4.2e-25 117.9 94 62.8
Glyma.12G063000 Glycine max HOM05D003862 ORTHO05D004398 4.2e-25 117.9 94 61.7
MD11G1108200 Malus domestica HOM05D003862 ORTHO05D004398 4.2e-25 117.9 94 61.7
RcHm_v2.0_Chr5g0064531 Rosa chinensis HOM05D003862 ORTHO05D004398 4.2e-25 117.9 94 61.7
GSVIVG01034172001 Vitis vinifera HOM05D003862 ORTHO05D004398 4.2e-25 117.9 94 62.8
Thecc.09G321500 Theobroma cacao HOM05D003862 ORTHO05D004398 5.5e-25 117.5 94 62.8
Carub.0003s2691 Capsella rubella HOM05D003862 ORTHO05D004398 7.1e-25 117.1 94 61.7
Gohir.D13G233100 Gossypium hirsutum HOM05D003862 ORTHO05D004398 7.1e-25 117.1 94 60.6
Gorai.013G263900 Gossypium raimondii HOM05D003862 ORTHO05D004398 7.1e-25 117.1 94 60.6
Nitab4.5_0002018g0010 Nicotiana tabacum HOM05D003862 ORTHO05D004398 7.1e-25 117.1 94 60.6
TWI75G0870 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 7.1e-25 117.1 94 60.6
Ca_19161_v3 Cicer arietinum L. HOM05D003862 ORTHO05D004398 9.3e-25 116.7 94 60.6
Thhalv10023780m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 9.3e-25 116.7 94 62.8
FvH4_3g36110 Fragaria vesca HOM05D003862 ORTHO05D004398 9.3e-25 116.7 93 61.3
FAN11G3597 Fragaria x ananassa HOM05D003862 ORTHO05D004398 9.3e-25 116.7 93 61.3
FAN16G1598 Fragaria x ananassa HOM05D003862 ORTHO05D004398 9.3e-25 116.7 93 61.3
FAN21G0907 Fragaria x ananassa HOM05D003862 ORTHO05D004398 9.3e-25 116.7 93 61.3
FAN25G1864 Fragaria x ananassa HOM05D003862 ORTHO05D004398 9.3e-25 116.7 93 61.3
Sed0018689 Sechium edule HOM05D003862 ORTHO05D004398 9.3e-25 116.7 94 60.6
TWI36G0288 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 9.3e-25 116.7 94 60.6
BcaC04g22454 Brassica carinata HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 62.8
A03p68180 Brassica napus HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 61.7
A09p15900 Brassica napus HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 62.8
C09p19140 Brassica napus HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 62.8
BolC9t54821H Brassica oleracea HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 62.8
BraA01t02647Z Brassica rapa HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 61.7
BraA09t37226Z Brassica rapa HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 62.8
CARHR155240 Cardamine hirsuta HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 61.7
ClCG10G021140 Citrullus lanatus HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 59.6
MELO3C009258.2 Cucumis melo HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 59.6
CsaV3_3G034900 Cucumis sativus L. HOM05D003862 ORTHO05D004398 1.2e-24 116.3 94 59.6
Ciclev10029679m.g Citrus clementina HOM05D003862 ORTHO05D004398 1.6e-24 115.9 94 60.6
Duzib150G0578 Durio zibethinus HOM05D003862 ORTHO05D004398 1.6e-24 115.9 94 61.7
Thhalv10002743m.g Eutrema salsugineum HOM05D003862 ORTHO05D004398 1.6e-24 115.9 94 61.7
Glyma.11G139400 Glycine max HOM05D003862 ORTHO05D004398 1.6e-24 115.9 94 60.6
PGR102G0842 Punica granatum HOM05D003862 ORTHO05D004398 1.6e-24 115.9 94 60.6
Sp2g01740 Schrenkiella parvula HOM05D003862 ORTHO05D004398 1.6e-24 115.9 94 61.7
AT3G46560 Arabidopsis thaliana HOM05D003862 ORTHO05D004398 2.1e-24 115.5 94 61.7
Prupe.6G077400 Prunus persica HOM05D003862 ORTHO05D004398 2.1e-24 115.5 94 60.6
Sed0022625 Sechium edule HOM05D003862 ORTHO05D004398 2.1e-24 115.5 94 60.6
TPR.G14480 Trifolium pratense HOM05D003862 ORTHO05D004398 2.1e-24 115.5 94 62.8
Carub.0005s1283 Capsella rubella HOM05D003862 ORTHO05D004398 2.7e-24 115.2 94 61.7
Cpa.g.sc81.150 Carica papaya HOM05D003862 ORTHO05D004398 2.7e-24 115.2 94 60.6
COL.COLO4_18508 Corchorus olitorius HOM05D003862 ORTHO05D004398 2.7e-24 115.2 94 60.6
Gohir.A13G227500 Gossypium hirsutum HOM05D003862 ORTHO05D004398 2.7e-24 115.2 94 59.6
Lj3g0018643 Lotus japonicus HOM05D003862 ORTHO05D004398 2.7e-24 115.2 94 59.6
Phvul.011G064100 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 2.7e-24 115.2 94 59.6
TWI31G1113 Tripterygium wilfordii HOM05D003862 ORTHO05D004398 2.7e-24 115.2 94 59.6
AL5G25420 Arabidopsis lyrata HOM05D003862 ORTHO05D004398 3.5e-24 114.8 94 60.6
MCO12G250 Micromonas commoda HOM05D003862 ORTHO05D004398 3.5e-24 114.8 83 63.9
Nitab4.5_0006455g0030 Nicotiana tabacum HOM05D003862 ORTHO05D004398 3.5e-24 114.8 94 59.6
CANSAT54G2947 Cannabis sativa HOM05D003862 ORTHO05D004398 6.0e-24 114.0 95 57.9
Lalb_Chr03g0026631 Lupinus albus HOM05D003862 ORTHO05D004398 6.0e-24 114.0 94 58.5
arahy.Tifrunner.gnm1.ann1.Q4VW5J Arachis hypogaea HOM05D003862 ORTHO05D004398 7.9e-24 113.6 94 59.6
Medtr4g063925 Medicago truncatula HOM05D003862 ORTHO05D004398 7.9e-24 113.6 94 58.5
PGR119G1270 Punica granatum HOM05D003862 ORTHO05D004398 7.9e-24 113.6 94 59.6
Aa31sc23G440 Aethionema arabicum HOM05D003862 ORTHO05D004398 1.0e-23 113.2 94 59.6
Lalb_Chr19g0137831 Lupinus albus HOM05D003862 ORTHO05D004398 1.0e-23 113.2 94 58.5
Pp3c20_6200 Physcomitrium patens HOM05D003862 ORTHO05D004398 1.3e-23 112.8 91 57.1
RcHm_v2.0_Chr3g0466561 Rosa chinensis HOM05D003862 ORTHO05D004398 1.3e-23 112.8 96 59.4
arahy.Tifrunner.gnm1.ann1.PAA8CG Arachis hypogaea HOM05D003862 ORTHO05D004398 1.8e-23 112.5 94 58.5
BcaB07g31364 Brassica carinata HOM05D003862 ORTHO05D004398 2.3e-23 112.1 94 60.6
Manes.01G173900 Manihot esculenta HOM05D003862 ORTHO05D004398 2.3e-23 112.1 93 58.1
Peaxi162Scf01517g00013 Petunia axillaris HOM05D003862 ORTHO05D004398 2.3e-23 112.1 86 59.3
Cfa016018 Carpinus fangiana HOM05D000273 ORTHO05D004398 3.0e-23 111.7 94 59.6
FAN02G2377 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.9e-23 111.3 86 59.3
FAN09G4075 Fragaria x ananassa HOM05D003862 ORTHO05D004398 3.9e-23 111.3 86 59.3
Prupe.6G255300 Prunus persica HOM05D003862 ORTHO05D004398 3.9e-23 111.3 95 56.8
Manes.02G133100 Manihot esculenta HOM05D003862 ORTHO05D004398 5.1e-23 110.9 93 57.0
MD04G1129100 Malus domestica HOM05D003862 ORTHO05D004398 8.7e-23 110.2 86 58.1
TPR.G17728 Trifolium pratense HOM05D003862 ORTHO05D004398 8.7e-23 110.2 93 57.0
MD12G1141800 Malus domestica HOM05D003862 ORTHO05D004398 1.1e-22 109.8 86 59.3
Aqoxy4G02928 Aquilegia oxysepala HOM05D003862 ORTHO05D004398 1.9e-22 109.0 93 54.8
FvH4_6g13690 Fragaria vesca HOM05D003862 ORTHO05D004398 1.9e-22 109.0 86 58.1
ATR0559G041 Amborella trichopoda HOM05D003862 ORTHO05D004398 2.5e-22 108.6 81 64.2
Hund04959 Selenicereus undatus HOM05D003862 ORTHO05D004398 4.3e-22 107.8 86 58.1
Actinidia11257 Actinidia chinensis HOM05D003862 ORTHO05D004398 5.7e-22 107.5 78 64.1
Rhsim05G0192800 Rhododendron simsii HOM05D003862 ORTHO05D004398 5.7e-22 107.5 117 50.4
Actinidia05313 Actinidia chinensis HOM05D003862 ORTHO05D004398 1.3e-21 106.3 84 61.9
HanXRQChr01g0009491 Helianthus annuus HOM05D003862 ORTHO05D004398 1.3e-21 106.3 90 58.9
vmacro08654 Vaccinium macrocarpon HOM05D003862 ORTHO05D004398 1.8e-20 102.4 63 71.4
MD03G1093400 Malus domestica HOM05D003862 ORTHO05D004398 2.4e-20 102.1 81 61.7
Sc20g0004910 Simmondsia chinensis HOM05D003862 ORTHO05D004398 3.1e-20 101.7 63 74.6
Dinv37171 Davidia involucrata HOM05D003862 ORTHO05D004398 5.3e-20 100.9 62 72.6
FAN27G3302 Fragaria x ananassa HOM05D003862 ORTHO05D004398 9.0e-20 100.1 86 55.8
Lj3g0015625 Lotus japonicus HOM05D003862 ORTHO05D004398 1.2e-19 99.8 93 51.6
Psat7g239120 Pisum sativum HOM05D003862 ORTHO05D004398 1.2e-19 99.8 83 54.2
CAN.G326.7 Capsicum annuum HOM05D003862 ORTHO05D004398 2.0e-19 99.0 63 71.4
VMungo1127G0240 Vigna mungo HOM05D003862 ORTHO05D004398 2.0e-19 99.0 81 59.3
Nn2g14532 Nelumbo nucifera HOM05D003862 ORTHO05D004398 2.6e-19 98.6 63 69.8
Phvul.L001624 Phaseolus vulgaris HOM05D003862 ORTHO05D004398 3.4e-19 98.2 93 50.5
TPR.G5603 Trifolium pratense HOM05D003862 ORTHO05D004398 3.4e-19 98.2 83 53.0
QL01p031927 Quercus lobata HOM05D003862 ORTHO05D004398 5.9e-19 97.4 62 69.4
arahy.Tifrunner.gnm1.ann1.L1N949 Arachis hypogaea HOM05D003862 ORTHO05D004398 7.6e-19 97.1 91 51.6
Haze_24096 Corylus avellana HOM05D003862 ORTHO05D004398 1.0e-18 96.7 62 67.7
arahy.Tifrunner.gnm1.ann1.817FQF Arachis hypogaea HOM05D003862 ORTHO05D004398 1.7e-18 95.9 91 50.5
arahy.Tifrunner.gnm1.ann1.JG2TRE Arachis hypogaea HOM05D003862 ORTHO05D004398 1.7e-18 95.9 91 50.5
arahy.Tifrunner.gnm1.ann1.GD7L84 Arachis hypogaea HOM05D003862 ORTHO05D004398 2.2e-18 95.5 91 50.5
PRCOL_00005138 Prasinoderma coloniale HOM05D003862 ORTHO05D004398 2.9e-18 95.1 77 57.1
Glyma.03G082300 Glycine max HOM05D003862 ORTHO05D004398 3.8e-18 94.7 93 47.3
unitig_6.g29269 Utricularia gibba HOM05D003862 ORTHO05D004398 8.5e-18 93.6 81 55.6
unitig_747.g21430 Utricularia gibba HOM05D003862 ORTHO05D004398 8.5e-18 93.6 81 55.6
PGR004G0102 Punica granatum HOM05D003862 ORTHO05D004398 1.9e-17 92.4 84 51.2
Eucgr.A01265 Eucalyptus grandis HOM05D003862 ORTHO05D004398 2.5e-17 92.0 78 56.4
QL07p048307 Quercus lobata HOM05D003862 ORTHO05D004398 2.5e-17 92.0 61 65.6
Peaxi162Scf00165g00129 Petunia axillaris HOM05D003862 ORTHO05D004398 7.2e-17 90.5 98 54.1
SalBow2G1777 Salvia bowleyana HOM05D003862 ORTHO05D004398 1.2e-16 89.7 78 52.6
Solyc08g048070.1 Solanum lycopersicum HOM05D003862 ORTHO05D004398 8.8e-15 83.6 67 56.7
Cre01.g033400 Chlamydomonas reinhardtii HOM05D003862 ORTHO05D004398 3.3e-14 81.6 73 53.4
FAN14G4115 Fragaria x ananassa HOM05D003862 ORTHO05D004398 6.3e-13 77.4 86 47.7
MBI14_g20103_MAGBIO Magnolia biondii HOM05D003862 ORTHO05D004398 8.2e-13 77.0 94 47.9
Os05g0111100 Oryza sativa ssp. japonica HOM05D003862 ORTHO05D004398 7.7e-11 70.5 70 45.7
Medtr4g021715 Medicago truncatula HOM05D003862 ORTHO05D004398 3.9e-07 58.2 83 38.6


User provided reference genes

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