Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g46754 Chara braunii HOM05D006242 ORTHO05D007936 4.7e-262 907.5 525 100.0
AagrBONN_evm.TU.Sc2ySwM_228.1028 Anthoceros agrestis HOM05D006242 ORTHO05D007936 4.8e-57 226.5 250 46.0
SMO203G0088 Selaginella moellendorffii HOM05D006242 ORTHO05D007936 1.2e-52 211.8 222 45.5
SEGI_06259 Sequoiadendron giganteum HOM05D006242 ORTHO05D007936 2.1e-52 211.1 231 45.0
Cfa000677 Carpinus fangiana HOM05D006242 ORTHO05D007936 3.6e-52 210.3 256 42.6
Haze_06141 Corylus avellana HOM05D006242 ORTHO05D007936 1.4e-51 208.4 256 43.4
Duzib248G1438 Durio zibethinus HOM05D006242 ORTHO05D007936 1.8e-51 208.0 246 45.5
PGR004G2427 Punica granatum HOM05D006242 ORTHO05D007936 3.0e-51 207.2 221 47.1
Prupe.4G115300 Prunus persica HOM05D006242 ORTHO05D007936 5.2e-51 206.5 256 43.8
Thecc.02G006000 Theobroma cacao HOM05D006242 ORTHO05D007936 8.8e-51 205.7 235 44.7
Actinidia22421 Actinidia chinensis HOM05D006242 ORTHO05D007936 1.2e-50 205.3 232 43.1
Dinv10532 Davidia involucrata HOM05D006242 ORTHO05D007936 1.2e-50 205.3 217 47.0
TWI38G1455 Tripterygium wilfordii HOM05D006242 ORTHO05D007936 1.2e-50 205.3 251 43.4
MD10G1229500 Malus domestica HOM05D006242 ORTHO05D007936 2.0e-50 204.5 256 43.8
RcHm_v2.0_Chr5g0020621 Rosa chinensis HOM05D006242 ORTHO05D007936 2.0e-50 204.5 256 43.8
CANSAT35G0032 Cannabis sativa HOM05D006242 ORTHO05D007936 2.6e-50 204.1 258 41.5
Atru.chr10.429 Acer truncatum HOM05D006242 ORTHO05D007936 9.7e-50 202.2 213 46.9
Eucgr.B01565 Eucalyptus grandis HOM05D006242 ORTHO05D007936 9.7e-50 202.2 226 43.8
Nitab4.5_0008021g0020 Nicotiana tabacum HOM05D006242 ORTHO05D007936 9.7e-50 202.2 236 43.6
Cpa.g.sc30.139 Carica papaya HOM05D006242 ORTHO05D007936 1.3e-49 201.8 251 42.2
CAN.G79.44 Capsicum annuum HOM05D006242 ORTHO05D007936 1.7e-49 201.4 257 41.6
A05p10660 Brassica napus HOM05D003281 ORTHO05D004128 2.8e-49 200.7 247 40.9
FAN21G1956 Fragaria x ananassa HOM05D006242 ORTHO05D007936 2.8e-49 200.7 256 43.0
ECA232G2813 Erigeron canadensis HOM05D006242 ORTHO05D007936 3.7e-49 200.3 247 42.5
Rhsim06G0063600 Rhododendron simsii HOM05D006242 ORTHO05D007936 3.7e-49 200.3 232 43.5
FvH4_3g12650 Fragaria vesca HOM05D006242 ORTHO05D007936 4.8e-49 199.9 256 41.8
FAN25G2599 Fragaria x ananassa HOM05D006242 ORTHO05D007936 4.8e-49 199.9 256 41.8
QL11p013482 Quercus lobata HOM05D006242 ORTHO05D007936 4.8e-49 199.9 239 43.1
Lalb_Chr19g0129141 Lupinus albus HOM05D006242 ORTHO05D007936 6.3e-49 199.5 249 42.2
C04p13760 Brassica napus HOM05D003281 ORTHO05D004128 1.1e-48 198.7 233 42.1
BolC4t22966H Brassica oleracea HOM05D003281 ORTHO05D004128 1.1e-48 198.7 233 42.1
CsaV3_6G052870 Cucumis sativus L. HOM05D006242 ORTHO05D007936 1.1e-48 198.7 219 44.3
Sabra01G0132400 Salix brachista HOM05D006242 ORTHO05D007936 1.1e-48 198.7 232 44.4
Sp2g07040 Schrenkiella parvula HOM05D006242 ORTHO05D007936 1.1e-48 198.7 215 43.3
Pp3c12_18460 Physcomitrium patens HOM05D006242 ORTHO05D007936 1.4e-48 198.4 242 41.7
GSVIVG01012122001 Vitis vinifera HOM05D006242 ORTHO05D007936 1.4e-48 198.4 230 45.7
Manes.03G074100 Manihot esculenta HOM05D006242 ORTHO05D007936 1.8e-48 198.0 235 43.4
SpUn0157_0010 Schrenkiella parvula HOM05D006242 ORTHO05D007936 1.8e-48 198.0 215 43.7
Ca_19722_v3 Cicer arietinum L. HOM05D006242 ORTHO05D007936 2.4e-48 197.6 218 45.4
ClCG01G025640 Citrullus lanatus HOM05D006242 ORTHO05D007936 2.4e-48 197.6 217 45.2
MBI02_g26996_MAGBIO Magnolia biondii HOM05D006242 ORTHO05D007936 2.4e-48 197.6 220 44.5
PGSC0003DMG400014939 Solanum tuberosum HOM05D006242 ORTHO05D007936 2.4e-48 197.6 237 41.4
Aa31LG9G16170 Aethionema arabicum HOM05D003281 ORTHO05D004128 3.1e-48 197.2 239 40.2
HanXRQChr12g0381511 Helianthus annuus HOM05D006242 ORTHO05D007936 5.3e-48 196.4 248 41.5
Solyc02g031980.3 Solanum lycopersicum HOM05D006242 ORTHO05D007936 5.3e-48 196.4 237 41.8
PSO541G0450 Papaver somniferum HOM05D006242 ORTHO05D007936 7.0e-48 196.1 240 42.9
Gohir.D12G047300 Gossypium hirsutum HOM05D006242 ORTHO05D007936 9.1e-48 195.7 226 42.9
Medtr1g050428 Medicago truncatula HOM05D006242 ORTHO05D007936 9.1e-48 195.7 214 45.8
PSO675G0930 Papaver somniferum HOM05D006242 ORTHO05D007936 9.1e-48 195.7 240 42.5
Gorai.008G050000 Gossypium raimondii HOM05D006242 ORTHO05D007936 1.2e-47 195.3 226 42.9
Mapoly0026s0041 Marchantia polymorpha HOM05D006242 ORTHO05D007936 2.0e-47 194.5 216 46.8
Psat6g094920 Pisum sativum HOM05D006242 ORTHO05D007936 2.0e-47 194.5 218 44.5
Sc17g0004220 Simmondsia chinensis HOM05D006242 ORTHO05D007936 2.7e-47 194.1 217 44.7
CDE05G0364 Ceratophyllum demersum HOM05D006242 ORTHO05D007936 5.9e-47 193.0 247 40.1
Hma1.2p1_1499F.1_g287250 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 7.7e-47 192.6 225 40.9
Lj6g0025800 Lotus japonicus HOM05D006242 ORTHO05D007936 7.7e-47 192.6 249 41.4
Potri.001G159600 Populus trichocarpa HOM05D006242 ORTHO05D007936 7.7e-47 192.6 259 41.7
MSTRG.20044 Avicennia marina HOM05D006242 ORTHO05D007936 1.0e-46 192.2 237 42.6
Migut.K01175 Erythranthe guttata HOM05D006242 ORTHO05D007936 1.0e-46 192.2 222 43.2
Gohir.A12G048500 Gossypium hirsutum HOM05D006242 ORTHO05D007936 1.0e-46 192.2 226 41.6
Thhalv10017018m.g Eutrema salsugineum HOM05D006242 ORTHO05D007936 1.3e-46 191.8 236 42.4
SalBow7G3063 Salvia bowleyana HOM05D006242 ORTHO05D007936 2.9e-46 190.7 219 43.4
SGA_v2.0_scaffold51G18672 Striga asiatica HOM05D006242 ORTHO05D007936 2.9e-46 190.7 238 42.4
Zm00001eb233240 Zea mays HOM05D006242 ORTHO05D007936 2.9e-46 190.7 221 43.9
FAN16G0457 Fragaria x ananassa HOM05D006242 ORTHO05D007936 8.5e-46 189.1 230 43.9
Carub.0004s1673 Capsella rubella HOM05D006242 ORTHO05D007936 1.1e-45 188.7 234 39.7
Cc00_g22870 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-45 188.7 221 41.2
COL.COLO4_17635 Corchorus olitorius HOM05D006242 ORTHO05D007936 1.1e-45 188.7 209 45.0
DCAR_007782 Daucus carota HOM05D006242 ORTHO05D007936 1.1e-45 188.7 247 40.5
Phvul.007G242500 Phaseolus vulgaris HOM05D006242 ORTHO05D007936 2.5e-45 187.6 172 52.9
Oeu058943.1 Olea europaea HOM05D006242 ORTHO05D007936 3.2e-45 187.2 237 39.7
AL4G31060 Arabidopsis lyrata HOM05D006242 ORTHO05D007936 7.2e-45 186.0 252 37.7
Hma1.2p1_1499F.1_g287260 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 9.4e-45 185.7 198 43.9
Sopen02g010240 Solanum pennellii HOM05D006242 ORTHO05D007936 1.2e-44 185.3 198 45.5
EL10Ac7g16757 Beta vulgaris HOM05D006242 ORTHO05D007936 2.1e-44 184.5 223 42.2
Lj6g0012918 Lotus japonicus HOM05D006242 ORTHO05D007936 3.6e-44 183.7 191 46.6
MELO3C007020.2 Cucumis melo HOM05D006242 ORTHO05D007936 1.0e-43 182.2 252 38.9
Cc09_g05740 Coffea canephora HOM05D006242 ORTHO05D007936 1.4e-43 181.8 224 40.6
Sed0024740 Sechium edule HOM05D006242 ORTHO05D007936 2.3e-43 181.0 259 37.8
Cc09_g05610 Coffea canephora HOM05D006242 ORTHO05D007936 4.0e-43 180.3 203 42.9
Lj1A1147G28 Lonicera japonica HOM05D006242 ORTHO05D007936 5.2e-43 179.9 186 46.2
Glyma.02G163900 Glycine max HOM05D006242 ORTHO05D007936 3.4e-42 177.2 218 43.6
arahy.Tifrunner.gnm1.ann1.PA3R73 Arachis hypogaea HOM05D006242 ORTHO05D007936 2.4e-40 171.0 254 38.2
Nitab4.5_0000138g0120 Nicotiana tabacum HOM05D006242 ORTHO05D007936 1.3e-38 165.2 236 36.9
THA.LOC104798560 Tarenaya hassleriana HOM05D006242 ORTHO05D007936 2.9e-38 164.1 305 32.5
Peaxi162Scf00198g01026 Petunia axillaris HOM05D006242 ORTHO05D007936 6.5e-38 162.9 235 36.6
Cc09_g05660 Coffea canephora HOM05D006242 ORTHO05D007936 1.6e-36 158.3 206 38.8
BcaC02g11584 Brassica carinata HOM05D006242 ORTHO05D007936 4.7e-36 156.8 215 37.7
Ciclev10016161m.g Citrus clementina HOM05D006242 ORTHO05D007936 8.0e-36 156.0 213 39.0
TPR.G10622 Trifolium pratense HOM05D006242 ORTHO05D007936 1.5e-34 151.8 218 37.6
PRCOL_00002215 Prasinoderma coloniale HOM05D005590 ORTHO05D007084 2.6e-34 151.0 195 43.1
CSS0025117 Camellia sinensis var. sinensis HOM05D006242 ORTHO05D007936 4.4e-34 150.2 192 40.6
Glyma.20G074000 Glycine max HOM05D006242 ORTHO05D007936 5.7e-34 149.8 208 40.4
arahy.Tifrunner.gnm1.ann1.VZGM4G Arachis hypogaea HOM05D006242 ORTHO05D007936 2.2e-33 147.9 228 36.0
HanXRQChr12g0369481 Helianthus annuus HOM05D006242 ORTHO05D007936 4.1e-32 143.7 166 41.0
Lsat_1_v5_gn_6_96480 Lactuca sativa HOM05D006242 ORTHO05D007936 2.0e-31 141.4 164 43.9
VMungo0720G1734 Vigna mungo HOM05D006242 ORTHO05D007936 5.0e-30 136.7 175 41.7
Cc09_g05680 Coffea canephora HOM05D006242 ORTHO05D007936 1.4e-27 128.6 185 37.8
Hma1.2p1_1700F.1_g298210 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.4e-27 128.6 247 31.6
AUR62040160 Chenopodium quinoa HOM05D006242 ORTHO05D007936 3.0e-27 127.5 169 40.8
unitig_37.g12020 Utricularia gibba HOM05D006242 ORTHO05D007936 4.0e-27 127.1 127 48.0
CiPaw.09G074600 Carya illinoinensis HOM05D006242 ORTHO05D007936 4.4e-26 123.6 137 40.9
HPP92_011011 Vanilla planifolia HOM05D006242 ORTHO05D007936 2.9e-25 120.9 142 45.8
CARHR129200 Cardamine hirsuta HOM05D006242 ORTHO05D007936 8.6e-22 109.4 117 41.0
MCO04G402 Micromonas commoda HOM05D006242 ORTHO05D007936 1.9e-21 108.2 172 35.5
AT2G35035 Arabidopsis thaliana HOM05D006242 ORTHO05D007936 5.6e-21 106.7 233 29.6
ATR1094G001 Amborella trichopoda HOM05D006242 ORTHO05D007936 7.3e-21 106.3 133 44.4
Nn7g38280 Nelumbo nucifera HOM05D006242 ORTHO05D007936 3.7e-17 94.0 94 46.8
SGA_v2.0_scaffold4G02502 Striga asiatica HOM05D006242 ORTHO05D007936 1.4e-16 92.0 95 49.5
TAR624G0344 Trochodendron aralioides HOM05D006242 ORTHO05D007936 3.2e-16 90.9 150 32.0
Aqoxy1G01391 Aquilegia oxysepala HOM05D006242 ORTHO05D007936 7.0e-16 89.7 93 49.5
GSVIVG01006138001 Vitis vinifera HOM05D006242 ORTHO05D007936 9.2e-16 89.4 85 51.8
Hma1.2p1_1700F.1_g298200 Hydrangea macrophylla HOM05D006242 ORTHO05D007936 1.0e-14 85.9 92 44.6
Cfa025972 Carpinus fangiana HOM05D006242 ORTHO05D007936 3.0e-14 84.3 121 34.7
Hund15670 Selenicereus undatus HOM05D006242 ORTHO05D007936 3.9e-14 84.0 93 44.1
AUR62037908 Chenopodium quinoa HOM05D006242 ORTHO05D007936 1.2e-12 79.0 104 41.3
Cc09_g05720 Coffea canephora HOM05D006242 ORTHO05D007936 1.1e-11 75.9 71 54.9
ATR1094G019 Amborella trichopoda HOM05D006242 ORTHO05D007936 3.1e-11 74.3 71 50.7
TPR.G22035 Trifolium pratense HOM05D006242 ORTHO05D007936 4.4e-10 70.5 71 49.3
Cc09_g05640 Coffea canephora HOM05D006242 ORTHO05D007936 4.6e-07 60.5 63 42.9


User provided reference genes

Program Settings