Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g46706 Chara braunii HOM05D004212 ORTHO05D005128 1.4e-193 679.5 358 100.0
Mapoly0013s0005 Marchantia polymorpha HOM05D004212 ORTHO05D005128 9.6e-49 198.4 360 43.9
CiPaw.09G201200 Carya illinoinensis HOM05D004212 ORTHO05D005128 2.2e-45 187.2 361 40.7
Gohir.D01G209900 Gossypium hirsutum HOM05D004212 ORTHO05D005128 3.5e-43 179.9 363 38.8
GSVIVG01034068001 Vitis vinifera HOM05D004212 ORTHO05D005128 6.0e-43 179.1 360 39.4
Nitab4.5_0008116g0030 Nicotiana tabacum HOM05D004212 ORTHO05D005128 7.9e-43 178.7 362 39.0
Gorai.002G255500 Gossypium raimondii HOM05D004212 ORTHO05D005128 5.1e-42 176.0 364 38.5
TAR633G1640 Trochodendron aralioides HOM05D004212 ORTHO05D005128 1.5e-41 174.5 363 39.4
Gohir.A01G221000 Gossypium hirsutum HOM05D004212 ORTHO05D005128 2.5e-41 173.7 364 40.1
CANSAT35G0035 Cannabis sativa HOM05D004212 ORTHO05D005128 5.6e-41 172.6 357 41.5
Thecc.05G029300 Theobroma cacao HOM05D004212 ORTHO05D005128 9.6e-41 171.8 366 38.3
Eucgr.K03043 Eucalyptus grandis HOM05D004212 ORTHO05D005128 4.8e-40 169.5 363 38.3
FAN07G0792 Fragaria x ananassa HOM05D004212 ORTHO05D005128 4.8e-40 169.5 355 38.3
FAN12G2442 Fragaria x ananassa HOM05D004212 ORTHO05D005128 4.8e-40 169.5 355 38.6
Potri.016G103800 Populus trichocarpa HOM05D004212 ORTHO05D005128 4.8e-40 169.5 356 39.3
HPP92_005893 Vanilla planifolia HOM05D004212 ORTHO05D005128 4.8e-40 169.5 359 36.8
FAN12G3486 Fragaria x ananassa HOM05D004212 ORTHO05D005128 6.2e-40 169.1 355 38.6
Cc06_g02090 Coffea canephora HOM05D004212 ORTHO05D005128 8.1e-40 168.7 361 38.2
TWI53G1663 Tripterygium wilfordii HOM05D004212 ORTHO05D005128 8.1e-40 168.7 365 40.0
TWI74G0733 Tripterygium wilfordii HOM05D004212 ORTHO05D005128 8.1e-40 168.7 362 41.2
Lalb_Chr03g0042691 Lupinus albus HOM05D004212 ORTHO05D005128 1.1e-39 168.3 360 37.5
Haze_20882 Corylus avellana HOM05D004212 ORTHO05D005128 1.4e-39 167.9 388 37.9
Haze_20891 Corylus avellana HOM05D004212 ORTHO05D005128 1.4e-39 167.9 388 37.9
PGR004G1844 Punica granatum HOM05D004212 ORTHO05D005128 1.8e-39 167.5 372 38.2
Ca_07566_v3 Cicer arietinum L. HOM05D004212 ORTHO05D005128 2.4e-39 167.2 362 37.3
HanXRQChr04g0124481 Helianthus annuus HOM05D004212 ORTHO05D005128 3.1e-39 166.8 360 37.2
CDE02G2360 Ceratophyllum demersum HOM05D004212 ORTHO05D005128 4.0e-39 166.4 361 38.5
Psat3g133560 Pisum sativum HOM05D004212 ORTHO05D005128 4.0e-39 166.4 356 37.4
Sed0021611 Sechium edule HOM05D004212 ORTHO05D005128 4.0e-39 166.4 358 39.9
Sopen09g006170 Solanum pennellii HOM05D004212 ORTHO05D005128 4.0e-39 166.4 361 38.0
TPR.G34923 Trifolium pratense HOM05D004212 ORTHO05D005128 4.0e-39 166.4 359 38.2
Sabra16G0103700 Salix brachista HOM05D004212 ORTHO05D005128 6.9e-39 165.6 356 38.5
Carub.0005s2056 Capsella rubella HOM05D004212 ORTHO05D005128 9.0e-39 165.2 360 37.5
AT3G53970 Arabidopsis thaliana HOM05D004212 ORTHO05D005128 1.2e-38 164.9 363 38.0
Cfa010180 Carpinus fangiana HOM05D004212 ORTHO05D005128 1.2e-38 164.9 357 39.2
Manes.09G098300 Manihot esculenta HOM05D004212 ORTHO05D005128 1.2e-38 164.9 363 38.8
MELO3C003185.2 Cucumis melo HOM05D004212 ORTHO05D005128 2.0e-38 164.1 357 38.1
EL10Ac3g05638 Beta vulgaris HOM05D004212 ORTHO05D005128 4.5e-38 162.9 361 36.8
Aa31LG10G8930 Aethionema arabicum HOM05D004212 ORTHO05D005128 5.8e-38 162.5 360 37.8
CsaV3_4G025590 Cucumis sativus L. HOM05D004212 ORTHO05D005128 5.8e-38 162.5 359 38.7
ClCG04G007620 Citrullus lanatus HOM05D004212 ORTHO05D005128 7.6e-38 162.2 357 38.7
DCAR_028811 Daucus carota HOM05D004212 ORTHO05D005128 7.6e-38 162.2 362 35.6
Lj1g0008590 Lotus japonicus HOM05D004212 ORTHO05D005128 7.6e-38 162.2 357 36.1
Lalb_Chr19g0125041 Lupinus albus HOM05D004212 ORTHO05D005128 7.6e-38 162.2 363 37.2
Peaxi162Scf00975g00132 Petunia axillaris HOM05D004212 ORTHO05D005128 7.6e-38 162.2 359 37.3
Solyc09g011450.4 Solanum lycopersicum HOM05D004212 ORTHO05D005128 9.9e-38 161.8 362 37.6
vmacro20195 Vaccinium macrocarpon HOM05D004212 ORTHO05D005128 1.7e-37 161.0 362 36.7
Ciclev10021036m.g Citrus clementina HOM05D004212 ORTHO05D005128 2.9e-37 160.2 357 38.9
COL.COLO4_14697 Corchorus olitorius HOM05D004212 ORTHO05D005128 2.9e-37 160.2 358 37.4
Lsat_1_v5_gn_8_84101 Lactuca sativa HOM05D004212 ORTHO05D005128 2.9e-37 160.2 364 36.5
Nn2g11289 Nelumbo nucifera HOM05D004212 ORTHO05D005128 3.8e-37 159.8 363 36.9
RcHm_v2.0_Chr4g0406841 Rosa chinensis HOM05D004212 ORTHO05D005128 8.4e-37 158.7 359 35.9
unitig_62.g23469 Utricularia gibba HOM05D004212 ORTHO05D005128 1.1e-36 158.3 359 37.0
Phvul.006G149300 Phaseolus vulgaris HOM05D004212 ORTHO05D005128 1.4e-36 157.9 357 37.5
PGSC0003DMG400024265 Solanum tuberosum HOM05D004212 ORTHO05D005128 1.4e-36 157.9 377 36.1
Aqoxy4G03223 Aquilegia oxysepala HOM05D004212 ORTHO05D005128 1.9e-36 157.5 363 36.1
AL5G34970 Arabidopsis lyrata HOM05D004212 ORTHO05D005128 1.9e-36 157.5 362 36.7
Hund00715 Selenicereus undatus HOM05D004212 ORTHO05D005128 1.9e-36 157.5 363 36.6
Sc22g0004390 Simmondsia chinensis HOM05D004212 ORTHO05D005128 1.9e-36 157.5 356 38.5
Pp3c12_26190 Physcomitrium patens HOM05D004212 ORTHO05D005128 3.2e-36 156.8 361 39.1
arahy.Tifrunner.gnm1.ann1.59HWIF Arachis hypogaea HOM05D004212 ORTHO05D005128 4.2e-36 156.4 356 36.5
arahy.Tifrunner.gnm1.ann1.MS11WY Arachis hypogaea HOM05D004212 ORTHO05D005128 4.2e-36 156.4 374 36.4
Aqoxy7G01126 Aquilegia oxysepala HOM05D004212 ORTHO05D005128 5.5e-36 156.0 363 35.8
Oeu001834.1 Olea europaea HOM05D004212 ORTHO05D005128 1.6e-35 154.5 358 38.8
arahy.Tifrunner.gnm1.ann1.PUF7HK Arachis hypogaea HOM05D004212 ORTHO05D005128 2.7e-35 153.7 374 36.1
arahy.Tifrunner.gnm1.ann1.77ZQ01 Arachis hypogaea HOM05D004212 ORTHO05D005128 3.5e-35 153.3 357 35.6
Glyma.09G059100 Glycine max HOM05D004212 ORTHO05D005128 4.6e-35 152.9 354 37.3
THA.LOC104806541 Tarenaya hassleriana HOM05D004212 ORTHO05D005128 4.6e-35 152.9 363 36.9
Ciclev10012365m.g Citrus clementina HOM05D004212 ORTHO05D005128 7.9e-35 152.1 359 37.3
AUR62021188 Chenopodium quinoa HOM05D004212 ORTHO05D005128 3.9e-34 149.8 357 35.9
Atru.chr8.2089 Acer truncatum HOM05D004212 ORTHO05D005128 5.1e-34 149.4 359 36.2
ATR1134G026 Amborella trichopoda HOM05D004212 ORTHO05D005128 5.1e-34 149.4 359 37.0
Medtr7g065120 Medicago truncatula HOM05D004212 ORTHO05D005128 6.7e-34 149.1 356 36.0
Prupe.6G264400 Prunus persica HOM05D004212 ORTHO05D005128 8.7e-34 148.7 356 37.4
Glyma.15G165200 Glycine max HOM05D004212 ORTHO05D005128 1.9e-33 147.5 354 36.2
SalBow7G2619 Salvia bowleyana HOM05D004212 ORTHO05D005128 1.9e-33 147.5 364 34.6
ECA236G3305 Erigeron canadensis HOM05D004212 ORTHO05D005128 3.3e-33 146.7 364 34.9
Os07g0548900 Oryza sativa ssp. japonica HOM05D004212 ORTHO05D005128 3.3e-33 146.7 360 33.9
CARHR163870 Cardamine hirsuta HOM05D004212 ORTHO05D005128 5.6e-33 146.0 365 35.1
Zm00001eb323600 Zea mays HOM05D004212 ORTHO05D005128 1.6e-32 144.4 360 35.3
PSO339G0401 Papaver somniferum HOM05D004212 ORTHO05D005128 4.8e-32 142.9 359 37.6
CSS0007767 Camellia sinensis var. sinensis HOM05D004212 ORTHO05D005128 8.2e-32 142.1 357 36.1
Migut.J00264 Erythranthe guttata HOM05D004212 ORTHO05D005128 8.2e-32 142.1 358 34.6
PSO384G5122 Papaver somniferum HOM05D004212 ORTHO05D005128 8.2e-32 142.1 359 36.2
QL07p028338 Quercus lobata HOM05D004212 ORTHO05D005128 1.1e-31 141.7 331 36.0
VMungo0540G1009 Vigna mungo HOM05D004212 ORTHO05D005128 1.8e-31 141.0 354 35.9
MSTRG.10244 Avicennia marina HOM05D004212 ORTHO05D005128 2.4e-31 140.6 362 35.9
BraA07t29869Z Brassica rapa HOM05D004212 ORTHO05D005128 2.4e-31 140.6 364 36.3
BcaB02g07758 Brassica carinata HOM05D004212 ORTHO05D005128 4.0e-31 139.8 364 36.8
arahy.Tifrunner.gnm1.ann1.SP0BHI Arachis hypogaea HOM05D004212 ORTHO05D005128 9.0e-31 138.7 343 36.7
A07p21880 Brassica napus HOM05D004212 ORTHO05D005128 9.0e-31 138.7 364 36.0
FvH4_4g10740 Fragaria vesca HOM05D004212 ORTHO05D005128 1.2e-30 138.3 303 38.0
SMO115G0073 Selaginella moellendorffii HOM05D004212 ORTHO05D005128 2.0e-30 137.5 356 34.0
BolC6t37364H Brassica oleracea HOM05D004212 ORTHO05D005128 2.6e-30 137.1 364 36.0
BcaC08g44655 Brassica carinata HOM05D004212 ORTHO05D005128 4.5e-30 136.3 364 36.0
C06p21750 Brassica napus HOM05D004212 ORTHO05D005128 4.5e-30 136.3 364 36.0
MD12G1154600 Malus domestica HOM05D004212 ORTHO05D005128 1.3e-29 134.8 359 36.5
AUR62015980 Chenopodium quinoa HOM05D004212 ORTHO05D005128 1.7e-29 134.4 357 33.9
Sp5g08430 Schrenkiella parvula HOM05D004212 ORTHO05D005128 2.9e-29 133.7 363 35.5
Duzib093G0395 Durio zibethinus HOM05D004212 ORTHO05D005128 1.4e-28 131.3 359 35.1
Thhalv10010577m.g Eutrema salsugineum HOM05D004212 ORTHO05D005128 1.9e-28 131.0 359 37.0
MD04G1138800 Malus domestica HOM05D004212 ORTHO05D005128 2.5e-28 130.6 358 34.9
Nn2g13527 Nelumbo nucifera HOM05D004212 ORTHO05D005128 2.1e-27 127.5 342 35.4
FAN05G0076 Fragaria x ananassa HOM05D004212 ORTHO05D005128 1.8e-26 124.4 353 34.0
Rhsim05G0199700 Rhododendron simsii HOM05D004212 ORTHO05D005128 1.8e-26 124.4 357 34.2
FAN14G3630 Fragaria x ananassa HOM05D004212 ORTHO05D005128 2.3e-26 124.0 360 34.2
Hma1.2p1_0671F.1_g200560 Hydrangea macrophylla HOM05D004212 ORTHO05D005128 3.0e-26 123.6 359 34.0
FvH4_6g12740 Fragaria vesca HOM05D004212 ORTHO05D005128 1.9e-25 120.9 353 34.0
Lj2C86T9 Lonicera japonica HOM05D004212 ORTHO05D005128 8.2e-24 115.5 332 31.6
Oeu021128.1 Olea europaea HOM05D004212 ORTHO05D005128 1.8e-23 114.4 428 30.6
SEGI_10222 Sequoiadendron giganteum HOM05D004212 ORTHO05D005128 5.3e-23 112.8 197 38.6
Dinv35542 Davidia involucrata HOM05D004212 ORTHO05D005128 4.5e-22 109.8 295 34.6
SGA_v2.0_scaffold673G53429 Striga asiatica HOM05D004212 ORTHO05D005128 2.9e-21 107.1 262 32.1
FAN09G1025 Fragaria x ananassa HOM05D004212 ORTHO05D005128 1.4e-20 104.8 151 41.1
BcaB01g00227 Brassica carinata HOM05D004212 ORTHO05D005128 1.2e-19 101.7 207 36.7
RcHm_v2.0_Chr3g0464661 Rosa chinensis HOM05D004212 ORTHO05D005128 7.9e-19 99.0 365 32.3
PSO104G0091 Papaver somniferum HOM05D004212 ORTHO05D005128 3.0e-18 97.1 163 38.7
RcHm_v2.0_Chr4g0419261 Rosa chinensis HOM05D004212 ORTHO05D005128 1.1e-17 95.1 157 39.5
PSO104G0005 Papaver somniferum HOM05D004212 ORTHO05D005128 1.5e-17 94.7 163 38.0
Lj4g0027540 Lotus japonicus HOM05D004212 ORTHO05D005128 4.3e-17 93.2 164 39.6
BraA09t40156Z Brassica rapa HOM05D004212 ORTHO05D005128 2.8e-16 90.5 220 34.5
Carub.0003s2694 Capsella rubella HOM05D004212 ORTHO05D005128 8.2e-16 89.0 158 39.9
CAN.G697.3 Capsicum annuum HOM05D004212 ORTHO05D005128 8.2e-16 89.0 205 33.2
PSO104G0021 Papaver somniferum HOM05D004212 ORTHO05D005128 8.2e-16 89.0 165 35.2
SEGI_17127 Sequoiadendron giganteum HOM05D004212 ORTHO05D005128 8.2e-16 89.0 156 47.4
PSO421G0231 Papaver somniferum HOM05D004212 ORTHO05D005128 1.1e-15 88.6 164 36.6
A09p46880 Brassica napus HOM05D004212 ORTHO05D005128 4.1e-15 86.7 207 32.9
Actinidia29168 Actinidia chinensis HOM05D004212 ORTHO05D005128 6.9e-15 85.9 361 31.0
AT1G48530 Arabidopsis thaliana HOM05D004212 ORTHO05D005128 1.2e-14 85.1 159 36.5
Prupe.6G304800 Prunus persica HOM05D004212 ORTHO05D005128 3.8e-13 80.1 153 35.9
AL3G43180 Arabidopsis lyrata HOM05D004212 ORTHO05D005128 6.5e-13 79.3 159 37.7
AL3G43230 Arabidopsis lyrata HOM05D004212 ORTHO05D005128 7.2e-12 75.9 158 37.3
Hma1.2p1_0097F.1_g048000 Hydrangea macrophylla HOM05D004212 ORTHO05D005128 2.7e-11 73.9 120 41.7
BcaB02g08498 Brassica carinata HOM05D004212 ORTHO05D005128 7.9e-11 72.4 336 29.5
CAN.G697.2 Capsicum annuum HOM05D004212 ORTHO05D005128 7.9e-11 72.4 132 45.5
MD12G1200000 Malus domestica HOM05D004212 ORTHO05D005128 7.9e-11 72.4 160 35.0
Lj3C960G5 Lonicera japonica HOM05D004212 ORTHO05D005128 3.0e-10 70.5 124 39.5
Duzib106G0220 Durio zibethinus HOM05D004212 ORTHO05D005128 8.8e-10 68.9 126 43.7
arahy.Tifrunner.gnm1.ann1.U24FMU Arachis hypogaea HOM05D004212 ORTHO05D005128 3.3e-09 67.0 111 42.3
BcaC02g09118 Brassica carinata HOM05D004212 ORTHO05D005128 9.7e-09 65.5 71 52.1
arahy.Tifrunner.gnm1.ann1.MGHR3Z Arachis hypogaea HOM05D004212 ORTHO05D005128 1.3e-08 65.1 123 39.0
BolC8t50520H Brassica oleracea HOM05D004212 ORTHO05D005128 1.4e-07 61.6 71 49.3
C08p29190 Brassica napus HOM05D004212 ORTHO05D005128 4.1e-07 60.1 71 47.9
BcaC07g39746 Brassica carinata HOM05D004212 ORTHO05D005128 1.2e-06 58.5 206 29.1


User provided reference genes

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