Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g45547 Chara braunii HOM05D003201 ORTHO05D008805 1.8e-176 622.5 318 100.0
Pp3c2_18510 Physcomitrium patens HOM05D003201 ORTHO05D008805 5.2e-14 82.8 268 29.5
Mapoly0007s0017 Marchantia polymorpha HOM05D003201 ORTHO05D008805 8.3e-12 75.5 277 28.2
CDE02G2127 Ceratophyllum demersum HOM05D003201 ORTHO05D008805 1.1e-11 75.1 268 30.6
PSO339G6265 Papaver somniferum HOM05D003201 ORTHO05D008805 3.2e-11 73.6 268 29.5
PSO384G0221 Papaver somniferum HOM05D003201 ORTHO05D008805 4.1e-11 73.2 268 28.7
Hund07019 Selenicereus undatus HOM05D003201 ORTHO05D008805 6.0e-10 69.3 268 28.0
SEGI_31075 Sequoiadendron giganteum HOM05D003201 ORTHO05D008805 6.0e-10 69.3 258 30.6
Lj1A555G38 Lonicera japonica HOM05D003201 ORTHO05D008805 1.1e-08 65.1 274 25.9
Lalb_Chr01g0008671 Lupinus albus HOM05D003201 ORTHO05D008805 1.5e-08 64.7 268 29.1
C01p14340 Brassica napus HOM05D003201 ORTHO05D008914 1.9e-08 64.3 268 28.4
Cc01_g05060 Coffea canephora HOM05D003201 ORTHO05D008805 1.9e-08 64.3 268 30.2
BolC1t01393H Brassica oleracea HOM05D000280 ORTHO05D004510 5.6e-08 62.8 258 27.9
Migut.N00525 Erythranthe guttata HOM05D003201 ORTHO05D008805 7.3e-08 62.4 267 24.7
ECA248G3933 Erigeron canadensis HOM05D003201 ORTHO05D008805 9.5e-08 62.0 266 25.6
Lj2g0011105 Lotus japonicus HOM05D003201 ORTHO05D008805 1.2e-07 61.6 269 27.9
TWI34G1882 Tripterygium wilfordii HOM05D003201 ORTHO05D008805 1.2e-07 61.6 268 27.2
MBI13_g39202_MAGBIO Magnolia biondii HOM05D003201 ORTHO05D008805 2.8e-07 60.5 269 26.8
Haze_24508 Corylus avellana HOM05D003201 ORTHO05D008805 3.6e-07 60.1 258 26.7
A01p12040 Brassica napus HOM05D003201 ORTHO05D008914 6.2e-07 59.3 268 26.5
ATR0068G091 Amborella trichopoda HOM05D003201 ORTHO05D008805 8.1e-07 58.9 268 26.5
Eucgr.J01718 Eucalyptus grandis HOM05D003201 ORTHO05D008805 1.1e-06 58.5 259 27.4
Medtr6g059320 Medicago truncatula HOM05D003201 ORTHO05D008805 1.1e-06 58.5 277 26.4
Thecc.05G124600 Theobroma cacao HOM05D003201 ORTHO05D008805 1.1e-06 58.5 268 26.9
TPR.G5800 Trifolium pratense HOM05D003201 ORTHO05D008805 1.1e-06 58.5 277 27.1
BcaC09g51346 Brassica carinata HOM05D003201 ORTHO05D008805 1.8e-06 57.8 172 30.2
BraA01t01146Z Brassica rapa HOM05D003201 ORTHO05D008914 1.8e-06 57.8 268 28.0
Cfa002302 Carpinus fangiana HOM05D003201 ORTHO05D008805 1.8e-06 57.8 258 27.1
Gohir.D09G114700 Gossypium hirsutum HOM05D003201 ORTHO05D008805 1.8e-06 57.8 268 26.1
HanXRQChr17g0555621 Helianthus annuus HOM05D003201 ORTHO05D008805 1.8e-06 57.8 268 24.3
Ca_25246_v3 Cicer arietinum L. HOM05D003201 ORTHO05D008805 2.3e-06 57.4 268 27.2
Glyma.16G207100 Glycine max HOM05D003201 ORTHO05D008805 2.3e-06 57.4 268 26.5
Gohir.A09G117900 Gossypium hirsutum HOM05D003201 ORTHO05D008805 2.3e-06 57.4 268 26.1
PGR119G1272 Punica granatum HOM05D003201 ORTHO05D008805 2.3e-06 57.4 261 26.4
arahy.Tifrunner.gnm1.ann1.F1EX5J Arachis hypogaea HOM05D003201 ORTHO05D008805 4.0e-06 56.6 182 29.1
VMungo0464G1483 Vigna mungo HOM05D003201 ORTHO05D008805 4.0e-06 56.6 268 25.7
Aqoxy5G03624 Aquilegia oxysepala HOM05D003201 ORTHO05D008805 5.2e-06 56.2 272 27.6
Manes.18G121700 Manihot esculenta HOM05D003201 ORTHO05D008805 5.2e-06 56.2 258 26.0
SGA_v2.0_scaffold6G03334 Striga asiatica HOM05D003201 ORTHO05D008805 5.2e-06 56.2 258 24.8
Thhalv10026088m.g Eutrema salsugineum HOM05D003201 ORTHO05D008805 6.8e-06 55.8 268 26.5
Glyma.09G156400 Glycine max HOM05D003201 ORTHO05D008805 6.8e-06 55.8 268 26.5
Potri.013G161600 Populus trichocarpa HOM05D003201 ORTHO05D008805 6.8e-06 55.8 268 26.1
GSVIVG01034815001 Vitis vinifera HOM05D003201 ORTHO05D008805 6.8e-06 55.8 273 25.3


User provided reference genes

Program Settings