Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g45479 Chara braunii HOM05D005577 ORTHO05D006941 2.8e-282 974.5 475 100.0
AagrBONN_evm.TU.Sc2ySwM_362.1325 Anthoceros agrestis HOM05D005577 ORTHO05D006941 1.6e-168 596.7 439 65.6
SEGI_29210 Sequoiadendron giganteum HOM05D005577 ORTHO05D006941 1.3e-165 587.0 439 63.1
Mapoly0051s0085 Marchantia polymorpha HOM05D005577 ORTHO05D006941 4.1e-164 582.0 450 63.1
TAR629G1549 Trochodendron aralioides HOM05D005577 ORTHO05D006941 1.0e-162 577.4 430 62.8
Nn3g16413 Nelumbo nucifera HOM05D005577 ORTHO05D006941 3.2e-161 572.4 435 60.9
GSVIVG01029087001 Vitis vinifera HOM05D005577 ORTHO05D006941 1.2e-160 570.5 434 61.5
ATR0561G025 Amborella trichopoda HOM05D005577 ORTHO05D006941 4.7e-160 568.5 430 60.9
SMO340G0130 Selaginella moellendorffii HOM05D005577 ORTHO05D006941 4.7e-160 568.5 431 65.2
TWI36G1278 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 1.4e-159 567.0 430 61.4
TWI75G1135 Tripterygium wilfordii HOM05D005577 ORTHO05D006941 2.0e-158 563.1 430 61.6
Sc11g0000360 Simmondsia chinensis HOM05D005577 ORTHO05D006941 3.4e-158 562.4 430 62.3
Sopen04g017360 Solanum pennellii HOM05D005577 ORTHO05D006941 4.4e-158 562.0 430 60.9
Eucgr.H04616 Eucalyptus grandis HOM05D005577 ORTHO05D006941 5.7e-158 561.6 430 61.2
Nitab4.5_0001010g0020 Nicotiana tabacum HOM05D005577 ORTHO05D006941 1.7e-157 560.1 432 61.6
CiPaw.06G104800 Carya illinoinensis HOM05D005577 ORTHO05D006941 3.7e-157 558.9 430 60.0
Glyma.05G148900 Glycine max HOM05D005577 ORTHO05D006941 3.7e-157 558.9 431 59.9
Ciclev10031511m.g Citrus clementina HOM05D005577 ORTHO05D006941 4.8e-157 558.5 434 60.4
Nitab4.5_0008235g0010 Nicotiana tabacum HOM05D005577 ORTHO05D006941 4.8e-157 558.5 432 61.3
HPP92_020263 Vanilla planifolia HOM05D005577 ORTHO05D006941 4.8e-157 558.5 431 61.0
Peaxi162Scf00128g01539 Petunia axillaris HOM05D005577 ORTHO05D006941 6.3e-157 558.1 430 60.9
Hund25478 Selenicereus undatus HOM05D005577 ORTHO05D006941 2.4e-156 556.2 430 60.2
CSS0033060 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 3.1e-156 555.8 431 61.7
Dinv11687 Davidia involucrata HOM05D005577 ORTHO05D006941 3.1e-156 555.8 415 62.4
Rhsim12G0094300 Rhododendron simsii HOM05D005577 ORTHO05D006941 4.1e-156 555.4 433 59.8
Lalb_Chr07g0187001 Lupinus albus HOM05D005577 ORTHO05D006941 5.4e-156 555.1 430 60.5
Migut.K00987 Erythranthe guttata HOM05D005577 ORTHO05D006941 1.2e-155 553.9 437 59.5
Cfa009383 Carpinus fangiana HOM05D005577 ORTHO05D006941 1.6e-155 553.5 430 58.6
CsaV3_6G008170 Cucumis sativus L. HOM05D005577 ORTHO05D006941 2.7e-155 552.7 430 60.5
Thhalv10018528m.g Eutrema salsugineum HOM05D005577 ORTHO05D006941 2.7e-155 552.7 433 59.4
Os07g0406800 Oryza sativa ssp. japonica HOM05D005577 ORTHO05D006941 2.7e-155 552.7 429 60.6
MSTRG.487 Avicennia marina HOM05D005577 ORTHO05D006941 4.5e-155 552.0 437 59.0
Gohir.A03G117000 Gossypium hirsutum HOM05D005577 ORTHO05D006941 4.5e-155 552.0 429 60.1
EL10Ac6g13532 Beta vulgaris HOM05D005577 ORTHO05D006941 5.9e-155 551.6 430 60.2
CANSAT01G0699 Cannabis sativa HOM05D005577 ORTHO05D006941 5.9e-155 551.6 431 60.3
Pp3c17_16180 Physcomitrium patens HOM05D005577 ORTHO05D006941 5.9e-155 551.6 435 61.1
Phvul.L003546 Phaseolus vulgaris HOM05D005577 ORTHO05D006941 7.7e-155 551.2 430 59.1
Glyma.08G105600 Glycine max HOM05D005577 ORTHO05D006941 2.2e-154 549.7 431 59.2
CSS0039862 Camellia sinensis var. sinensis HOM05D005577 ORTHO05D006941 2.9e-154 549.3 433 60.5
Duzib248G1391 Durio zibethinus HOM05D005577 ORTHO05D006941 2.9e-154 549.3 430 60.0
Medtr8g097160 Medicago truncatula HOM05D005577 ORTHO05D006941 2.9e-154 549.3 431 58.9
Aqoxy5G03309 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 3.8e-154 548.9 431 60.3
Sp5g22260 Schrenkiella parvula HOM05D005577 ORTHO05D006941 3.8e-154 548.9 436 59.6
CARHR059800 Cardamine hirsuta HOM05D005577 ORTHO05D006941 5.0e-154 548.5 431 59.6
Manes.12G008900 Manihot esculenta HOM05D005577 ORTHO05D006941 6.5e-154 548.1 430 59.1
BcaB03g15345 Brassica carinata HOM05D005577 ORTHO05D006941 8.5e-154 547.7 430 59.1
Gorai.005G164500 Gossypium raimondii HOM05D005577 ORTHO05D006941 1.1e-153 547.4 430 60.0
Manes.13G009300 Manihot esculenta HOM05D005577 ORTHO05D006941 1.5e-153 547.0 440 57.7
FAN07G0551 Fragaria x ananassa HOM05D005577 ORTHO05D006941 2.5e-153 546.2 438 58.0
MD13G1121900 Malus domestica HOM05D005577 ORTHO05D006941 2.5e-153 546.2 431 59.6
Sed0021319 Sechium edule HOM05D005577 ORTHO05D006941 2.5e-153 546.2 430 59.1
Ca_18016_v3 Cicer arietinum L. HOM05D005577 ORTHO05D006941 3.2e-153 545.8 438 57.8
Lj6A829T30 Lonicera japonica HOM05D005577 ORTHO05D006941 3.2e-153 545.8 448 58.7
Thecc.02G202700 Theobroma cacao HOM05D005577 ORTHO05D006941 3.2e-153 545.8 430 59.1
Haze_12444 Corylus avellana HOM05D005577 ORTHO05D006941 4.2e-153 545.4 455 55.8
Gohir.D02G146900 Gossypium hirsutum HOM05D005577 ORTHO05D006941 4.2e-153 545.4 430 59.8
THA.LOC104807138 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 7.2e-153 544.7 430 60.0
A02p14150 Brassica napus HOM05D005577 ORTHO05D006941 9.5e-153 544.3 436 58.9
FAN12G2046 Fragaria x ananassa HOM05D005577 ORTHO05D006941 9.5e-153 544.3 464 56.2
Zm00001eb421110 Zea mays HOM05D005577 ORTHO05D006941 2.1e-152 543.1 429 59.0
arahy.Tifrunner.gnm1.ann1.V9CB21 Arachis hypogaea HOM05D005577 ORTHO05D006941 2.8e-152 542.7 432 58.6
C02p22860 Brassica napus HOM05D005577 ORTHO05D006941 3.6e-152 542.3 436 58.7
FAN22G0128 Fragaria x ananassa HOM05D005577 ORTHO05D006941 4.7e-152 542.0 438 57.8
ECA233G0246 Erigeron canadensis HOM05D005577 ORTHO05D006941 1.0e-151 540.8 430 58.8
arahy.Tifrunner.gnm1.ann1.HTD3J8 Arachis hypogaea HOM05D005577 ORTHO05D006941 1.4e-151 540.4 432 58.3
Cc11_g17150 Coffea canephora HOM05D005577 ORTHO05D006941 1.4e-151 540.4 430 59.5
Carub.0002s1360 Capsella rubella HOM05D005577 ORTHO05D006941 1.8e-151 540.0 430 59.5
Potri.003G169300 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.8e-151 540.0 441 58.0
TPR.G26572 Trifolium pratense HOM05D005577 ORTHO05D006941 5.2e-151 538.5 431 58.0
DCAR_024669 Daucus carota HOM05D005577 ORTHO05D006941 6.8e-151 538.1 461 55.3
HanXRQChr12g0354651 Helianthus annuus HOM05D005577 ORTHO05D006941 6.8e-151 538.1 430 58.6
AT1G67320 Arabidopsis thaliana HOM05D005577 ORTHO05D006941 1.5e-150 537.0 430 59.1
Solyc04g045530.4 Solanum lycopersicum HOM05D005577 ORTHO05D006941 2.0e-150 536.6 415 61.2
SalBow2G2693 Salvia bowleyana HOM05D005577 ORTHO05D006941 2.6e-150 536.2 430 59.5
AL2G25840 Arabidopsis lyrata HOM05D005577 ORTHO05D006941 3.4e-150 535.8 430 59.3
BraA07t30887Z Brassica rapa HOM05D005577 ORTHO05D006941 5.7e-150 535.0 449 56.6
RcHm_v2.0_Chr4g0418271 Rosa chinensis HOM05D005577 ORTHO05D006941 7.5e-150 534.6 451 55.9
Lsat_1_v5_gn_2_63520 Lactuca sativa HOM05D005577 ORTHO05D006941 9.8e-150 534.3 430 57.4
THA.LOC104825491 Tarenaya hassleriana HOM05D005577 ORTHO05D006941 9.8e-150 534.3 433 58.7
Lj4g0002319 Lotus japonicus HOM05D005577 ORTHO05D006941 2.2e-149 533.1 430 57.9
HanXRQChr12g0357271 Helianthus annuus HOM05D005577 ORTHO05D006941 4.9e-149 531.9 430 58.1
QL03p051875 Quercus lobata HOM05D005577 ORTHO05D006941 4.9e-149 531.9 441 57.4
BolC2t08435H Brassica oleracea HOM05D005577 ORTHO05D006941 8.3e-149 531.2 456 56.1
Oeu058914.1 Olea europaea HOM05D005577 ORTHO05D006941 9.2e-148 527.7 447 55.9
BraA02t06478Z Brassica rapa HOM05D005577 ORTHO05D006941 1.2e-147 527.3 465 55.1
A07p32630 Brassica napus HOM05D005577 ORTHO05D006941 1.6e-147 526.9 441 56.9
CDE05G3041 Ceratophyllum demersum HOM05D005577 ORTHO05D006941 3.5e-147 525.8 440 56.6
COL.COLO4_20442 Corchorus olitorius HOM05D005577 ORTHO05D006941 3.8e-146 522.3 430 58.1
Ah.03g135990 Amaranthus hybridus HOM05D005577 ORTHO05D006941 1.5e-145 520.4 430 58.1
PSO017G5787 Papaver somniferum HOM05D005577 ORTHO05D006941 2.5e-145 519.6 430 56.5
Hma1.2p1_0065F.1_g035160 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 3.0e-143 512.7 430 57.7
Prupe.1G223400 Prunus persica HOM05D005577 ORTHO05D006941 6.4e-141 505.0 430 55.8
ClCG06G002100 Citrullus lanatus HOM05D005577 ORTHO05D006941 1.4e-140 503.8 430 57.0
Zm00001eb407100 Zea mays HOM05D005577 ORTHO05D006941 7.0e-140 501.5 389 59.4
SGA_v2.0_scaffold114G31915 Striga asiatica HOM05D005577 ORTHO05D006941 1.6e-139 500.4 445 55.3
MELO3C022319.2 Cucumis melo HOM05D005577 ORTHO05D006941 3.5e-139 499.2 397 59.7
unitig_699.g19962 Utricularia gibba HOM05D005577 ORTHO05D006941 8.6e-138 494.6 469 51.8
vmacro17973 Vaccinium macrocarpon HOM05D005577 ORTHO05D006941 5.6e-137 491.9 489 52.1
Actinidia09628 Actinidia chinensis HOM05D005577 ORTHO05D006941 4.7e-136 488.8 391 59.3
CAN.G97.33 Capsicum annuum HOM05D005577 ORTHO05D006941 1.4e-135 487.3 431 55.5
Sabra03G0124100 Salix brachista HOM05D005577 ORTHO05D006941 1.4e-135 487.3 468 52.1
Aa31LG2G15630 Aethionema arabicum HOM05D005577 ORTHO05D006941 2.3e-135 486.5 438 55.5
BcaC03g14832 Brassica carinata HOM05D005577 ORTHO05D006941 4.0e-135 485.7 396 57.8
QL02p017501 Quercus lobata HOM05D005577 ORTHO05D006941 7.8e-131 471.5 413 55.0
FvH4_4g14550 Fragaria vesca HOM05D005577 ORTHO05D006941 1.5e-129 467.2 364 59.6
Cpa.g.sc43.82 Carica papaya HOM05D005577 ORTHO05D006941 1.2e-123 447.6 430 51.4
AUR62028904 Chenopodium quinoa HOM05D005577 ORTHO05D006941 7.8e-123 444.9 443 50.6
AUR62005646 Chenopodium quinoa HOM05D005577 ORTHO05D006941 2.3e-122 443.4 430 51.6
PRCOL_00003669 Prasinoderma coloniale HOM05D005577 ORTHO05D006941 3.1e-119 433.0 432 54.6
MCO02G430 Micromonas commoda HOM05D005577 ORTHO05D006941 3.8e-117 426.0 448 49.6
Hma1.2p1_0065F.1_g035170 Hydrangea macrophylla HOM05D005577 ORTHO05D006941 2.1e-115 420.2 326 60.7
Psat7g076760 Pisum sativum HOM05D005577 ORTHO05D006941 2.4e-103 380.2 278 62.9
BcaB05g24262 Brassica carinata HOM05D005577 ORTHO05D006941 2.4e-100 370.2 432 47.9
Cre06.g293000 Chlamydomonas reinhardtii HOM05D005577 ORTHO05D006941 2.1e-91 340.5 479 40.9
MD09G1083700 Malus domestica HOM05D005577 ORTHO05D006941 1.5e-81 307.8 321 49.5
TAR371G1028 Trochodendron aralioides HOM05D005577 ORTHO05D006941 5.9e-78 295.8 430 40.0
QL03p057485 Quercus lobata HOM05D005577 ORTHO05D006941 4.1e-71 273.1 376 41.5
Aqoxy7G01339 Aquilegia oxysepala HOM05D005577 ORTHO05D006941 3.8e-69 266.5 187 65.2
Atru.chr11.2352 Acer truncatum HOM05D005577 ORTHO05D006941 1.2e-49 201.8 108 81.5
Psat7g076800 Pisum sativum HOM05D005577 ORTHO05D006941 8.3e-40 169.1 154 50.0
MD16G1122200 Malus domestica HOM05D005577 ORTHO05D006941 3.8e-37 160.2 340 30.0
RcHm_v2.0_Chr4g0417261 Rosa chinensis HOM05D005577 ORTHO05D006941 2.0e-33 147.9 379 30.9
Dinv17584 Davidia involucrata HOM05D005577 ORTHO05D006941 4.5e-30 136.7 396 26.8
Atru.chr11.2353 Acer truncatum HOM05D005577 ORTHO05D006941 3.3e-28 130.6 121 57.0
RcHm_v2.0_Chr4g0417231 Rosa chinensis HOM05D005577 ORTHO05D006941 6.1e-27 126.3 141 49.6
Atru.chr11.2354 Acer truncatum HOM05D005577 ORTHO05D006941 6.8e-26 122.9 104 55.8
SHI17980 Sapria himalayana HOM05D005577 ORTHO05D006941 1.7e-24 118.2 80 61.2
Lsat_1_v5_gn_0_16180 Lactuca sativa HOM05D005577 ORTHO05D006941 8.3e-24 115.9 119 47.1
MCO16G135 Micromonas commoda HOM05D005577 ORTHO05D267611 2.0e-22 111.3 552 23.2
Potri.017G053801 Populus trichocarpa HOM05D005577 ORTHO05D006941 1.5e-20 105.1 52 80.8
A10p10750 Brassica napus HOM05D005577 ORTHO05D006941 1.7e-16 91.7 65 61.5
SHI17983 Sapria himalayana HOM05D005577 ORTHO05D006941 1.6e-14 85.1 78 48.7
SHI17982 Sapria himalayana HOM05D005577 ORTHO05D006941 1.1e-12 79.0 76 46.1
MD16G1122100 Malus domestica HOM05D005577 ORTHO05D006941 1.5e-12 78.6 79 45.6
RcHm_v2.0_Chr4g0417241 Rosa chinensis HOM05D005577 ORTHO05D006941 5.2e-10 70.1 66 50.0
QL10p065845 Quercus lobata HOM05D000176 ORTHO05D000106 2.0e-09 68.2 102 38.2
SHI17981 Sapria himalayana HOM05D005577 ORTHO05D006941 7.5e-09 66.2 56 60.7


User provided reference genes

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