Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g45392 Chara braunii HOM05D006342 ORTHO05D008155 0.0e+00 1302.3 681 100.0
TPR.G35344 Trifolium pratense HOM05D006342 ORTHO05D008155 1.2e-68 265.4 273 51.3
Psat7g100320 Pisum sativum HOM05D006342 ORTHO05D008155 7.9e-68 262.7 273 50.9
Lj4g0023834 Lotus japonicus HOM05D006342 ORTHO05D008155 1.8e-67 261.5 273 51.3
Medtr4g094100 Medicago truncatula HOM05D006342 ORTHO05D008155 3.9e-67 260.4 273 50.9
Ca_18366_v3 Cicer arietinum L. HOM05D003001 ORTHO05D003494 1.1e-66 258.8 273 50.9
Lalb_Chr05g0217591 Lupinus albus HOM05D006342 ORTHO05D008155 1.1e-66 258.8 273 50.2
Aa31LG2G9860 Aethionema arabicum HOM05D006342 ORTHO05D008155 2.8e-65 254.2 276 48.2
Prupe.8G064500 Prunus persica HOM05D006342 ORTHO05D008155 4.8e-65 253.4 277 48.4
FvH4_6g33511 Fragaria vesca HOM05D006342 ORTHO05D008155 6.2e-65 253.1 283 47.3
Sabra17G0037300 Salix brachista HOM05D006342 ORTHO05D008155 6.2e-65 253.1 276 49.3
FAN02G0548 Fragaria x ananassa HOM05D006342 ORTHO05D008155 8.2e-65 252.7 276 47.8
EL10Ac9g21517 Beta vulgaris HOM05D006342 ORTHO05D008155 1.4e-64 251.9 273 48.4
SMO364G0259 Selaginella moellendorffii HOM05D006342 ORTHO05D008155 1.4e-64 251.9 264 48.9
GSVIVG01015772001 Vitis vinifera HOM05D006342 ORTHO05D008155 1.4e-64 251.9 284 48.6
Glyma.13G042800 Glycine max HOM05D006342 ORTHO05D008155 3.1e-64 250.8 276 49.3
Pp3c15_22700 Physcomitrium patens HOM05D006342 ORTHO05D008155 3.1e-64 250.8 294 47.6
Potri.017G050900 Populus trichocarpa HOM05D006342 ORTHO05D008155 3.1e-64 250.8 276 49.3
QL11p022820 Quercus lobata HOM05D006342 ORTHO05D008155 4.0e-64 250.4 276 48.2
MELO3C018621.2 Cucumis melo HOM05D006342 ORTHO05D008155 6.9e-64 249.6 273 49.1
Gorai.005G222500 Gossypium raimondii HOM05D006342 ORTHO05D008155 6.9e-64 249.6 276 48.9
Actinidia24004 Actinidia chinensis HOM05D006342 ORTHO05D008155 9.0e-64 249.2 273 48.4
CANSAT21G1086 Cannabis sativa HOM05D006342 ORTHO05D008155 9.0e-64 249.2 302 46.4
Dinv24174 Davidia involucrata HOM05D006342 ORTHO05D008155 9.0e-64 249.2 276 48.2
Gohir.A03G175100 Gossypium hirsutum HOM05D006342 ORTHO05D008155 9.0e-64 249.2 276 48.6
Gohir.D02G198600 Gossypium hirsutum HOM05D006342 ORTHO05D008155 1.2e-63 248.8 276 48.6
Mapoly0112s0045 Marchantia polymorpha HOM05D006342 ORTHO05D008155 1.2e-63 248.8 332 46.4
Glyma.08G070600 Glycine max HOM05D006342 ORTHO05D008155 2.0e-63 248.1 306 46.1
RcHm_v2.0_Chr2g0143381 Rosa chinensis HOM05D006342 ORTHO05D008155 2.6e-63 247.7 276 47.8
CsaV3_7G006740 Cucumis sativus L. HOM05D006342 ORTHO05D008155 3.4e-63 247.3 273 48.7
TAR628G1271 Trochodendron aralioides HOM05D006342 ORTHO05D008155 4.5e-63 246.9 276 48.2
Manes.07G034700 Manihot esculenta HOM05D006342 ORTHO05D008155 5.8e-63 246.5 276 48.2
Ciclev10028615m.g Citrus clementina HOM05D006342 ORTHO05D008155 7.6e-63 246.1 275 46.5
BraA01t03071Z Brassica rapa HOM05D006342 ORTHO05D008155 1.0e-62 245.7 275 49.1
Thecc.02G134500 Theobroma cacao HOM05D006342 ORTHO05D008155 1.3e-62 245.4 277 47.7
COL.COLO4_32304 Corchorus olitorius HOM05D006342 ORTHO05D008155 1.7e-62 245.0 270 48.9
BcaB04g20275 Brassica carinata HOM05D006342 ORTHO05D008155 2.9e-62 244.2 276 48.6
Cc02_g21250 Coffea canephora HOM05D006342 ORTHO05D008155 2.9e-62 244.2 286 45.5
ECA234G3624 Erigeron canadensis HOM05D006342 ORTHO05D008155 2.9e-62 244.2 276 47.8
TWI23G0792 Tripterygium wilfordii HOM05D006342 ORTHO05D008155 2.9e-62 244.2 276 48.2
A01p29370 Brassica napus HOM05D006342 ORTHO05D008155 3.8e-62 243.8 275 48.4
Carub.0002s0473 Capsella rubella HOM05D006342 ORTHO05D008155 3.8e-62 243.8 276 47.8
Nn5g30026 Nelumbo nucifera HOM05D006342 ORTHO05D008155 3.8e-62 243.8 273 47.3
Peaxi162Scf01060g00128 Petunia axillaris HOM05D006342 ORTHO05D008155 3.8e-62 243.8 273 48.4
PSO447G0017 Papaver somniferum HOM05D006342 ORTHO05D008155 4.9e-62 243.4 273 46.9
VMungo0251G1514 Vigna mungo HOM05D006342 ORTHO05D008155 4.9e-62 243.4 276 49.3
Nitab4.5_0003959g0010 Nicotiana tabacum HOM05D006342 ORTHO05D008155 6.5e-62 243.0 273 48.0
Lsat_1_v5_gn_5_108680 Lactuca sativa HOM05D006342 ORTHO05D008155 8.4e-62 242.7 276 47.5
Nitab4.5_0000863g0140 Nicotiana tabacum HOM05D006342 ORTHO05D008155 8.4e-62 242.7 273 48.0
Thhalv10023528m.g Eutrema salsugineum HOM05D006342 ORTHO05D008155 1.1e-61 242.3 275 48.7
AUR62010160 Chenopodium quinoa HOM05D006342 ORTHO05D008155 1.4e-61 241.9 273 46.5
AL2G16000 Arabidopsis lyrata HOM05D006342 ORTHO05D008155 2.5e-61 241.1 274 48.2
AT1G60600 Arabidopsis thaliana HOM05D006342 ORTHO05D008155 2.5e-61 241.1 276 47.8
BcaC09g49390 Brassica carinata HOM05D006342 ORTHO05D008155 2.5e-61 241.1 275 48.4
C01p37160 Brassica napus HOM05D006342 ORTHO05D008155 2.5e-61 241.1 275 48.4
BolC1t03681H Brassica oleracea HOM05D006342 ORTHO05D008155 2.5e-61 241.1 276 47.5
AUR62013159 Chenopodium quinoa HOM05D006342 ORTHO05D008155 3.2e-61 240.7 273 47.3
Hma1.2p1_0522F.1_g171800 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 3.2e-61 240.7 273 46.9
CSS0025541 Camellia sinensis var. sinensis HOM05D006342 ORTHO05D008155 7.1e-61 239.6 273 48.0
Duzib052G0010 Durio zibethinus HOM05D006342 ORTHO05D008155 7.1e-61 239.6 302 44.4
Hund06370 Selenicereus undatus HOM05D006342 ORTHO05D008155 7.1e-61 239.6 267 47.9
Rhsim11G0137800 Rhododendron simsii HOM05D006342 ORTHO05D008155 9.3e-61 239.2 273 47.3
Sabra17G0037900 Salix brachista HOM05D006342 ORTHO05D008155 2.1e-60 238.0 248 51.6
CAN.G523.45 Capsicum annuum HOM05D006342 ORTHO05D008155 2.7e-60 237.7 273 46.5
Sabra17G0042600 Salix brachista HOM05D006342 ORTHO05D008155 2.7e-60 237.7 248 51.2
THA.LOC104799883 Tarenaya hassleriana HOM05D006342 ORTHO05D008155 2.7e-60 237.7 269 49.8
HanXRQChr10g0303621 Helianthus annuus HOM05D006342 ORTHO05D008155 3.5e-60 237.3 273 48.7
RhsimUnG0187900 Rhododendron simsii HOM05D006342 ORTHO05D008155 3.5e-60 237.3 273 46.9
Sopen01g047960 Solanum pennellii HOM05D006342 ORTHO05D008155 3.5e-60 237.3 270 47.4
Solyc01g105460.4 Solanum lycopersicum HOM05D006342 ORTHO05D008155 4.6e-60 236.9 266 47.7
Migut.B00584 Erythranthe guttata HOM05D006342 ORTHO05D008155 6.0e-60 236.5 324 42.6
arahy.Tifrunner.gnm1.ann1.U7PRNJ Arachis hypogaea HOM05D006342 ORTHO05D008155 7.9e-60 236.1 266 48.1
Eucgr.G00932 Eucalyptus grandis HOM05D006342 ORTHO05D008155 1.0e-59 235.7 287 46.0
MSTRG.16600 Avicennia marina HOM05D006342 ORTHO05D008155 1.3e-59 235.3 276 47.5
ClCG09G015650 Citrullus lanatus HOM05D006342 ORTHO05D008155 2.3e-59 234.6 245 51.0
PGSC0003DMG400012575 Solanum tuberosum HOM05D006342 ORTHO05D008155 2.3e-59 234.6 275 46.9
DCAR_003711 Daucus carota HOM05D006342 ORTHO05D008155 3.9e-59 233.8 273 47.6
Os03g0190100 Oryza sativa ssp. japonica HOM05D006342 ORTHO05D008155 3.9e-59 233.8 275 46.9
PGR042G1699 Punica granatum HOM05D006342 ORTHO05D008155 3.9e-59 233.8 268 48.1
SGA_v2.0_scaffold83G26327 Striga asiatica HOM05D006342 ORTHO05D008155 6.7e-59 233.0 284 46.8
SalBow5G5605 Salvia bowleyana HOM05D006342 ORTHO05D008155 1.1e-58 232.3 276 48.2
Sc15g0003050 Simmondsia chinensis HOM05D006342 ORTHO05D008155 1.5e-58 231.9 317 40.4
Atru.chr6.1184 Acer truncatum HOM05D006342 ORTHO05D008155 3.3e-58 230.7 317 41.6
Oeu042410.2 Olea europaea HOM05D006342 ORTHO05D008155 1.3e-57 228.8 273 46.2
unitig_0.g609 Utricularia gibba HOM05D006342 ORTHO05D008190 2.1e-57 228.0 274 47.4
CiPaw.05G033400 Carya illinoinensis HOM05D006342 ORTHO05D008155 4.1e-56 223.8 219 53.0
Lj9A350G66 Lonicera japonica HOM05D006342 ORTHO05D008155 1.2e-55 222.2 279 45.5
arahy.Tifrunner.gnm1.ann1.XZGJ82 Arachis hypogaea HOM05D006342 ORTHO05D008155 2.6e-55 221.1 241 49.8
MD10G1052500 Malus domestica HOM05D006342 ORTHO05D008155 2.6e-55 221.1 277 44.0
PSO210G1371 Papaver somniferum HOM05D006342 ORTHO05D008155 6.5e-54 216.5 228 49.6
Cpa.g.sc42.26 Carica papaya HOM05D006342 ORTHO05D008155 1.4e-53 215.3 254 46.5
Migut.B01155 Erythranthe guttata HOM05D006342 ORTHO05D008155 1.4e-53 215.3 306 41.5
Sed0004067 Sechium edule HOM05D006342 ORTHO05D008155 2.5e-53 214.5 208 53.8
Phvul.002G210750 Phaseolus vulgaris HOM05D006342 ORTHO05D008155 3.2e-53 214.2 210 53.3
Migut.B01157 Erythranthe guttata HOM05D006342 ORTHO05D008155 5.5e-53 213.4 299 41.8
MSTRG.20291 Avicennia marina HOM05D006342 ORTHO05D008155 2.1e-52 211.5 289 42.2
MBI05_g05612_MAGBIO Magnolia biondii HOM05D006342 ORTHO05D008155 2.1e-52 211.5 264 45.8
HPP92_019303 Vanilla planifolia HOM05D006342 ORTHO05D008155 4.6e-52 210.3 333 38.7
AagrBONN_evm.TU.Sc2ySwM_228.424 Anthoceros agrestis HOM05D006342 ORTHO05D008155 4.3e-50 203.8 258 46.5
FAN09G1871 Fragaria x ananassa HOM05D006342 ORTHO05D003187 5.7e-50 203.4 276 41.7
PRCOL_00002739 Prasinoderma coloniale HOM05D006342 ORTHO05D008155 7.4e-50 203.0 279 44.4
Zm00001eb006830 Zea mays HOM05D006342 ORTHO05D008155 1.3e-46 192.2 277 41.9
AagrBONN_evm.TU.Sc2ySwM_117.3744 Anthoceros agrestis HOM05D006342 ORTHO05D008155 1.4e-45 188.7 272 40.4
vmacro01839 Vaccinium macrocarpon HOM05D006342 ORTHO05D008155 7.2e-45 186.4 317 36.9
QL11p022738 Quercus lobata HOM05D006342 ORTHO05D008155 1.5e-42 178.7 232 44.8
Ah.01g010100 Amaranthus hybridus HOM05D006342 ORTHO05D008155 4.8e-41 173.7 238 43.3
SpUN0430_0010 Schrenkiella parvula HOM05D006342 ORTHO05D008155 7.7e-39 166.4 205 46.3
Oeu000253.3 Olea europaea HOM05D006342 ORTHO05D008155 1.0e-38 166.0 274 39.1
Cre04.g219787 Chlamydomonas reinhardtii HOM05D006342 ORTHO05D008155 1.6e-36 158.7 321 38.6
FAN14G1047 Fragaria x ananassa HOM05D000343 ORTHO05D003187 5.2e-35 153.7 282 33.3
Hma1.2p1_0522F.1_g171810 Hydrangea macrophylla HOM05D006342 ORTHO05D008155 1.4e-32 145.6 172 44.8
SEGI_15165 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 5.5e-29 133.7 150 48.0
Haze_10585 Corylus avellana HOM05D006342 ORTHO05D008155 3.6e-28 131.0 257 33.5
Glyma.10G123801 Glycine max HOM05D006342 ORTHO05D008155 1.3e-17 95.9 100 49.0
Glyma.16G064700 Glycine max HOM05D006342 ORTHO05D008155 1.3e-17 95.9 100 49.0
SEGI_15059 Sequoiadendron giganteum HOM05D006342 ORTHO05D008155 1.7e-14 85.5 107 44.9
Aqoxy5G01924 Aquilegia oxysepala HOM05D006342 ORTHO05D008155 3.8e-14 84.3 98 42.9
ATR0918G004 Amborella trichopoda HOM05D006342 ORTHO05D008155 2.3e-11 75.1 77 48.1
TAR376G0398 Trochodendron aralioides HOM05D000064 ORTHO05D001307 2.7e-07 61.6 47 57.4


User provided reference genes

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