Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g45363 Chara braunii HOM05D005294 ORTHO05D006720 1.6e-303 1045.4 574 100.0
Pp3c15_19200 Physcomitrium patens HOM05D005294 ORTHO05D006720 1.5e-59 235.0 471 31.6
SEGI_34717 Sequoiadendron giganteum HOM05D005294 ORTHO05D006720 3.3e-59 233.8 409 33.3
Mapoly0079s0005 Marchantia polymorpha HOM05D005294 ORTHO05D006720 6.2e-58 229.6 513 30.4
Aqoxy7G03926 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 5.1e-52 209.9 357 33.9
PSO210G1233 Papaver somniferum HOM05D005294 ORTHO05D006720 1.3e-50 205.3 359 32.9
PSO210G3043 Papaver somniferum HOM05D005294 ORTHO05D006720 2.8e-50 204.1 359 32.9
Sc08g0008210 Simmondsia chinensis HOM05D005294 ORTHO05D006720 2.8e-50 204.1 388 33.0
Manes.16G105100 Manihot esculenta HOM05D005294 ORTHO05D006720 1.4e-49 201.8 357 35.0
Prupe.7G214700 Prunus persica HOM05D005294 ORTHO05D006720 2.4e-49 201.1 350 35.1
PRCOL_00004982 Prasinoderma coloniale HOM05D005294 ORTHO05D006720 5.3e-49 199.9 365 35.3
CSS0007070 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 2.6e-48 197.6 390 32.3
Haze_25869 Corylus avellana HOM05D005294 ORTHO05D006720 2.6e-48 197.6 472 29.2
MBI04_g06995_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 3.4e-48 197.2 365 32.3
HPP92_009085 Vanilla planifolia HOM05D005294 ORTHO05D006720 4.5e-48 196.8 390 31.5
MD15G1202500 Malus domestica HOM05D005294 ORTHO05D006720 7.6e-48 196.1 363 32.8
Ciclev10008203m.g Citrus clementina HOM05D005294 ORTHO05D006720 1.3e-47 195.3 391 31.5
BcaC01g06444 Brassica carinata HOM05D005294 ORTHO05D006720 1.7e-47 194.9 357 30.5
CSS0004577 Camellia sinensis var. sinensis HOM05D005294 ORTHO05D006720 2.2e-47 194.5 391 32.7
BraA03t10634Z Brassica rapa HOM05D005294 ORTHO05D006720 2.9e-47 194.1 366 30.3
QL02p063470 Quercus lobata HOM05D005294 ORTHO05D006720 2.9e-47 194.1 393 32.3
C03p15490 Brassica napus HOM05D005294 ORTHO05D006720 3.8e-47 193.7 357 31.1
Hund05510 Selenicereus undatus HOM05D005294 ORTHO05D006720 6.5e-47 193.0 350 33.1
A03p13220 Brassica napus HOM05D005294 ORTHO05D006720 8.4e-47 192.6 357 30.8
BolC3t13987H Brassica oleracea HOM05D005294 ORTHO05D006720 8.4e-47 192.6 357 30.8
Os09g0347800 Oryza sativa ssp. japonica HOM05D005294 ORTHO05D006720 8.4e-47 192.6 363 31.1
Zm00001eb310550 Zea mays HOM05D005294 ORTHO05D006720 1.1e-46 192.2 361 31.9
BraA10t43499Z Brassica rapa HOM05D005294 ORTHO05D006720 1.4e-46 191.8 473 27.9
TAR624G1381 Trochodendron aralioides HOM05D005294 ORTHO05D006720 1.4e-46 191.8 372 32.3
MSTRG.19532 Avicennia marina HOM05D005294 ORTHO05D006720 1.9e-46 191.4 381 30.4
BcaB01g04417 Brassica carinata HOM05D005294 ORTHO05D006720 2.5e-46 191.0 358 31.3
A10p14080 Brassica napus HOM05D005294 ORTHO05D006720 3.2e-46 190.7 473 27.7
Nitab4.5_0001492g0020 Nicotiana tabacum HOM05D005294 ORTHO05D006720 3.2e-46 190.7 400 31.2
BcaB08g36064 Brassica carinata HOM05D005294 ORTHO05D006720 4.2e-46 190.3 472 27.8
Medtr5g080780 Medicago truncatula HOM05D005294 ORTHO05D006720 7.1e-46 189.5 363 31.7
EL10Ac7g17721 Beta vulgaris HOM05D005294 ORTHO05D006720 9.3e-46 189.1 376 32.7
Lj7C671G8 Lonicera japonica HOM05D005294 ORTHO05D006720 9.3e-46 189.1 395 32.4
MD02G1072700 Malus domestica HOM05D005294 ORTHO05D006720 9.3e-46 189.1 350 33.4
Potri.013G068200 Populus trichocarpa HOM05D005294 ORTHO05D006720 9.3e-46 189.1 356 32.9
Rhsim05G0031400 Rhododendron simsii HOM05D005294 ORTHO05D006720 9.3e-46 189.1 392 32.4
vmacro10822 Vaccinium macrocarpon HOM05D005294 ORTHO05D006720 9.3e-46 189.1 363 32.8
Thhalv10013465m.g Eutrema salsugineum HOM05D005294 ORTHO05D006720 1.6e-45 188.3 470 27.0
ATR0705G179 Amborella trichopoda HOM05D005294 ORTHO05D006720 2.1e-45 188.0 365 33.2
CANSAT64G1758 Cannabis sativa HOM05D005294 ORTHO05D006720 2.1e-45 188.0 356 32.0
Phvul.008G230500 Phaseolus vulgaris HOM05D005294 ORTHO05D006720 2.1e-45 188.0 366 32.2
CiPaw.03G219800 Carya illinoinensis HOM05D005294 ORTHO05D006720 2.7e-45 187.6 460 29.6
AUR62025414 Chenopodium quinoa HOM05D005294 ORTHO05D006720 2.7e-45 187.6 367 32.2
AUR62008827 Chenopodium quinoa HOM05D005294 ORTHO05D006720 3.5e-45 187.2 367 31.9
DCAR_012006 Daucus carota HOM05D005294 ORTHO05D006720 3.5e-45 187.2 379 31.4
Dinv36732 Davidia involucrata HOM05D005294 ORTHO05D006720 3.5e-45 187.2 477 29.1
Glyma.14G065800 Glycine max HOM05D005294 ORTHO05D006720 3.5e-45 187.2 365 32.1
TWI63G0491 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 3.5e-45 187.2 392 31.4
Actinidia39748 Actinidia chinensis HOM05D005294 ORTHO05D006720 6.0e-45 186.4 368 32.3
Gohir.D06G069100 Gossypium hirsutum HOM05D005294 ORTHO05D006720 6.0e-45 186.4 391 32.0
Gorai.010G080700 Gossypium raimondii HOM05D005294 ORTHO05D006720 6.0e-45 186.4 391 32.0
CAN.G142.7 Capsicum annuum HOM05D005294 ORTHO05D006720 7.9e-45 186.0 365 31.0
Cpa.g.sc32.101 Carica papaya HOM05D005294 ORTHO05D006720 7.9e-45 186.0 391 30.9
RcHm_v2.0_Chr2g0092581 Rosa chinensis HOM05D005294 ORTHO05D006720 7.9e-45 186.0 367 33.5
TWI34G0876 Tripterygium wilfordii HOM05D005294 ORTHO05D006720 1.0e-44 185.7 364 31.0
Eucgr.C03688 Eucalyptus grandis HOM05D005294 ORTHO05D006720 1.3e-44 185.3 356 31.7
Lalb_Chr15g0084501 Lupinus albus HOM05D005294 ORTHO05D006720 1.8e-44 184.9 356 31.7
Sp6g18490 Schrenkiella parvula HOM05D005294 ORTHO05D006720 1.8e-44 184.9 358 29.6
PGSC0003DMG400033362 Solanum tuberosum HOM05D005294 ORTHO05D006720 1.8e-44 184.9 395 31.1
AT5G56740 Arabidopsis thaliana HOM05D005294 ORTHO05D006720 2.3e-44 184.5 363 29.5
COL.COLO4_18242 Corchorus olitorius HOM05D005294 ORTHO05D006720 2.3e-44 184.5 362 30.9
AL8G32570 Arabidopsis lyrata HOM05D005294 ORTHO05D006720 3.0e-44 184.1 357 29.4
FAN26G0700 Fragaria x ananassa HOM05D005294 ORTHO05D006720 3.0e-44 184.1 357 33.6
Lalb_Chr18g0053011 Lupinus albus HOM05D005294 ORTHO05D006720 3.0e-44 184.1 352 32.4
Atru.chr7.1522 Acer truncatum HOM05D005294 ORTHO05D006720 3.9e-44 183.7 396 29.0
LjContig00141g0021499 Lotus japonicus HOM05D005294 ORTHO05D006720 3.9e-44 183.7 477 27.3
Nitab4.5_0004011g0060 Nicotiana tabacum HOM05D005294 ORTHO05D006720 3.9e-44 183.7 479 28.4
Lsat_1_v5_gn_5_146040 Lactuca sativa HOM05D005294 ORTHO05D006720 6.7e-44 183.0 366 32.0
arahy.Tifrunner.gnm1.ann1.CWN4E9 Arachis hypogaea HOM05D005294 ORTHO05D006720 8.7e-44 182.6 359 30.4
Cfa003134 Carpinus fangiana HOM05D005294 ORTHO05D006720 8.7e-44 182.6 472 29.4
Cc06_g10960 Coffea canephora HOM05D005294 ORTHO05D006720 8.7e-44 182.6 365 32.3
Glyma.02G250900 Glycine max HOM05D005294 ORTHO05D006720 1.1e-43 182.2 364 31.3
FvH4_1g06810 Fragaria vesca HOM05D005294 ORTHO05D006720 1.5e-43 181.8 357 33.3
FAN19G0312 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.5e-43 181.8 357 33.3
FAN23G1873 Fragaria x ananassa HOM05D005294 ORTHO05D006720 1.9e-43 181.4 357 33.6
Gohir.A06G070500 Gossypium hirsutum HOM05D005294 ORTHO05D006720 1.9e-43 181.4 391 31.5
THA.LOC104811733 Tarenaya hassleriana HOM05D005294 ORTHO05D006720 1.9e-43 181.4 388 29.1
Psat2g038680 Pisum sativum HOM05D005294 ORTHO05D006720 2.5e-43 181.0 364 31.0
Aa31LG3G12690 Aethionema arabicum HOM05D005294 ORTHO05D006720 3.3e-43 180.6 361 29.9
arahy.Tifrunner.gnm1.ann1.T94LMP Arachis hypogaea HOM05D005294 ORTHO05D006720 3.3e-43 180.6 359 30.1
Carub.0008s1722 Capsella rubella HOM05D005294 ORTHO05D006720 4.3e-43 180.3 394 28.4
FAN26G2354 Fragaria x ananassa HOM05D005294 ORTHO05D006720 4.3e-43 180.3 357 33.3
PGR102G3363 Punica granatum HOM05D005294 ORTHO05D006720 5.7e-43 179.9 370 30.0
TPR.G25848 Trifolium pratense HOM05D005294 ORTHO05D006720 7.4e-43 179.5 361 30.2
Sopen02g017740 Solanum pennellii HOM05D005294 ORTHO05D006720 1.3e-42 178.7 392 29.8
Peaxi162Scf01468g00004 Petunia axillaris HOM05D005294 ORTHO05D006720 1.6e-42 178.3 384 30.5
Duzib168G2227 Durio zibethinus HOM05D005294 ORTHO05D006720 2.2e-42 177.9 477 26.8
MCO15G657 Micromonas commoda HOM05D005294 ORTHO05D006720 2.8e-42 177.6 381 31.5
ClCG11G001870 Citrullus lanatus HOM05D005294 ORTHO05D006720 3.7e-42 177.2 379 30.9
CARHR270490 Cardamine hirsuta HOM05D005294 ORTHO05D006720 4.8e-42 176.8 372 29.0
Ca_05904_v3 Cicer arietinum L. HOM05D005294 ORTHO05D006720 4.8e-42 176.8 365 32.9
Sabra13G0059500 Salix brachista HOM05D005294 ORTHO05D006720 6.3e-42 176.4 397 30.5
VMungo0647G0234 Vigna mungo HOM05D005294 ORTHO05D006720 6.3e-42 176.4 480 26.9
Solyc02g068580.1 Solanum lycopersicum HOM05D005294 ORTHO05D006720 8.2e-42 176.0 392 29.8
HanXRQChr12g0355321 Helianthus annuus HOM05D005294 ORTHO05D006720 1.1e-41 175.6 473 26.8
GSVIVG01015248001 Vitis vinifera HOM05D005294 ORTHO05D006720 1.8e-41 174.9 472 28.0
CsaV3_2G001600 Cucumis sativus L. HOM05D005294 ORTHO05D006720 4.1e-41 173.7 482 28.4
Thecc.09G094300 Theobroma cacao HOM05D005294 ORTHO05D006720 4.1e-41 173.7 477 27.7
Sed0020374 Sechium edule HOM05D005294 ORTHO05D006720 5.3e-41 173.3 374 30.7
Ah.15g091540 Amaranthus hybridus HOM05D005294 ORTHO05D006720 9.0e-41 172.6 365 31.8
ECA234G1346 Erigeron canadensis HOM05D005294 ORTHO05D006720 9.0e-41 172.6 474 27.2
Aqoxy4G01946 Aquilegia oxysepala HOM05D005294 ORTHO05D006720 1.2e-40 172.2 353 30.9
CDE09G1011 Ceratophyllum demersum HOM05D005294 ORTHO05D006720 1.5e-40 171.8 365 29.0
Migut.J00438 Erythranthe guttata HOM05D005294 ORTHO05D006720 2.2e-39 167.9 357 29.7
Cre03.g186500 Chlamydomonas reinhardtii HOM05D005294 ORTHO05D006720 1.9e-38 164.9 315 35.2
SGA_v2.0_scaffold62G21576 Striga asiatica HOM05D005294 ORTHO05D006720 3.7e-34 150.6 498 25.3
Nn6g35397 Nelumbo nucifera HOM05D005294 ORTHO05D006720 6.3e-34 149.8 253 34.8
Haze_25870 Corylus avellana HOM05D005294 ORTHO05D006720 1.4e-33 148.7 373 27.9
MELO3C004615.2 Cucumis melo HOM05D005294 ORTHO05D006720 1.4e-33 148.7 323 32.5
unitig_26.g9161 Utricularia gibba HOM05D005294 ORTHO05D006720 5.3e-33 146.7 393 28.5
BcaC04g20057 Brassica carinata HOM05D005294 ORTHO05D006720 3.0e-28 131.0 197 34.0
C09p48310 Brassica napus HOM05D005294 ORTHO05D006720 3.0e-28 131.0 197 34.0
BolC9t57681H Brassica oleracea HOM05D005294 ORTHO05D006720 3.0e-28 131.0 197 34.0
Zm00001eb171070 Zea mays HOM05D005294 ORTHO05D006720 4.8e-26 123.6 165 37.6
SHI02790 Sapria himalayana HOM05D005294 ORTHO05D006720 5.3e-25 120.2 315 28.3
Zm00001eb301910 Zea mays HOM05D005294 ORTHO05D006720 9.1e-25 119.4 165 36.4
RcHm_v2.0_Chr2g0093921 Rosa chinensis HOM05D005294 ORTHO05D006720 2.7e-21 107.8 100 49.0
SMO281G0026 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 4.8e-18 97.1 123 42.3
MBI14_g43979_MAGBIO Magnolia biondii HOM05D005294 ORTHO05D006720 1.1e-17 95.9 145 35.9
Aa31LG3G12670 Aethionema arabicum HOM05D004235 ORTHO05D005157 2.0e-16 91.7 99 43.4
Oeu052126.1 Olea europaea HOM05D005294 ORTHO05D006720 2.2e-15 88.2 154 33.1
SGA_v2.0_scaffold10G05199 Striga asiatica HOM05D005294 ORTHO05D006720 8.8e-12 76.3 166 27.7
SMO244G0078 Selaginella moellendorffii HOM05D005294 ORTHO05D006720 2.6e-11 74.7 147 36.7
Zm00001eb382850 Zea mays HOM05D005294 ORTHO05D006720 1.8e-09 68.6 100 34.0
Zm00001eb383990 Zea mays HOM05D005294 ORTHO05D006720 7.0e-09 66.6 89 36.0
Aa31LG3G12580 Aethionema arabicum HOM05D005294 ORTHO05D006720 2.0e-08 65.1 126 29.4
Aa31LG3G12620 Aethionema arabicum HOM05D005294 ORTHO05D006720 2.0e-08 65.1 126 29.4
Aa31sc2040G10 Aethionema arabicum HOM05D005294 ORTHO05D006720 2.2e-07 61.6 123 29.3


User provided reference genes

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