Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g45280 Chara braunii HOM05D006758 ORTHO05D008326 9.3e-65 250.0 120 100.0
Duzib235G1228 Durio zibethinus HOM05D006758 ORTHO05D008326 3.9e-39 164.9 93 81.7
Gohir.A06G207900 Gossypium hirsutum HOM05D006758 ORTHO05D008326 3.9e-39 164.9 93 82.8
Gorai.010G252900 Gossypium raimondii HOM05D006758 ORTHO05D008326 3.9e-39 164.9 93 82.8
COL.COLO4_31733 Corchorus olitorius HOM05D006758 ORTHO05D008326 8.8e-39 163.7 93 80.6
AagrBONN_evm.TU.Sc2ySwM_344.4905 Anthoceros agrestis HOM05D006758 ORTHO05D008326 1.5e-38 162.9 93 83.9
Duzib192G0534 Durio zibethinus HOM05D006758 ORTHO05D008326 2.6e-38 162.2 93 79.6
Mapoly0102s0010 Marchantia polymorpha HOM05D006758 ORTHO05D008326 2.6e-38 162.2 93 81.7
Thecc.06G214600 Theobroma cacao HOM05D006758 ORTHO05D008326 2.6e-38 162.2 93 79.6
THA.LOC104809516 Tarenaya hassleriana HOM05D006758 ORTHO05D008326 3.3e-38 161.8 93 80.6
ATR0661G232 Amborella trichopoda HOM05D006758 ORTHO05D008326 4.4e-38 161.4 93 79.6
Phvul.007G052700 Phaseolus vulgaris HOM05D006758 ORTHO05D008326 1.3e-37 159.8 93 79.6
Nn1g03624 Nelumbo nucifera HOM05D006758 ORTHO05D008326 2.8e-37 158.7 93 79.6
Psat0s2691g0120 Pisum sativum HOM05D006758 ORTHO05D008326 2.8e-37 158.7 93 78.5
GSVIVG01012634001 Vitis vinifera HOM05D006758 ORTHO05D008326 2.8e-37 158.7 93 78.5
Ciclev10017296m.g Citrus clementina HOM05D006758 ORTHO05D008326 3.7e-37 158.3 93 79.6
Os08g0190800 Oryza sativa ssp. japonica HOM05D006758 ORTHO05D008326 3.7e-37 158.3 94 77.7
AL2G14330 Arabidopsis lyrata HOM05D006758 ORTHO05D008326 4.8e-37 157.9 95 76.8
AT1G61780 Arabidopsis thaliana HOM05D006758 ORTHO05D008326 4.8e-37 157.9 95 76.8
arahy.Tifrunner.gnm1.ann1.ND4ZK6 Arachis hypogaea HOM05D006758 ORTHO05D008326 4.8e-37 157.9 93 78.5
CAN.G569.41 Capsicum annuum HOM05D006758 ORTHO05D008326 4.8e-37 157.9 93 77.4
Ca_10997_v3 Cicer arietinum L. HOM05D006758 ORTHO05D008326 4.8e-37 157.9 93 78.5
Gohir.A09G069700 Gossypium hirsutum HOM05D006758 ORTHO05D008326 4.8e-37 157.9 93 78.5
Gohir.D09G069600 Gossypium hirsutum HOM05D006758 ORTHO05D008326 4.8e-37 157.9 93 78.5
PGR004G2441 Punica granatum HOM05D006758 ORTHO05D008326 4.8e-37 157.9 93 78.5
Solyc02g080140.4 Solanum lycopersicum HOM05D006758 ORTHO05D008326 4.8e-37 157.9 93 77.4
Sopen02g024850 Solanum pennellii HOM05D006758 ORTHO05D008326 4.8e-37 157.9 93 77.4
TPR.G5478 Trifolium pratense HOM05D006758 ORTHO05D008326 4.8e-37 157.9 93 78.5
Zm00001eb413280 Zea mays HOM05D006758 ORTHO05D008326 4.8e-37 157.9 94 77.7
Cc02_g11670 Coffea canephora HOM05D006758 ORTHO05D008326 6.3e-37 157.5 97 75.3
Dinv20021 Davidia involucrata HOM05D006758 ORTHO05D008326 6.3e-37 157.5 93 77.4
Nitab4.5_0002347g0160 Nicotiana tabacum HOM05D006758 ORTHO05D008326 6.3e-37 157.5 93 77.4
Nitab4.5_0008530g0010 Nicotiana tabacum HOM05D006758 ORTHO05D008326 6.3e-37 157.5 93 77.4
Prupe.4G025700 Prunus persica HOM05D006758 ORTHO05D008326 6.3e-37 157.5 93 77.4
Glyma.10G251800 Glycine max HOM05D006758 ORTHO05D008326 8.2e-37 157.1 93 77.4
Glyma.20G141700 Glycine max HOM05D006758 ORTHO05D008326 8.2e-37 157.1 93 77.4
PSO210G7269 Papaver somniferum HOM05D006758 ORTHO05D008326 8.2e-37 157.1 93 77.4
PSO832G0089 Papaver somniferum HOM05D006758 ORTHO05D008326 8.2e-37 157.1 93 77.4
SMO351G0293 Selaginella moellendorffii HOM05D006758 ORTHO05D008326 8.2e-37 157.1 90 80.0
Aa31LG1G3210 Aethionema arabicum HOM05D006758 ORTHO05D008326 1.1e-36 156.8 95 75.8
Eucgr.D01293 Eucalyptus grandis HOM05D006758 ORTHO05D008326 1.1e-36 156.8 93 78.5
MD05G1341600 Malus domestica HOM05D006758 ORTHO05D008326 1.1e-36 156.8 93 77.4
Potri.004G021200 Populus trichocarpa HOM05D006758 ORTHO05D008326 1.1e-36 156.8 90 77.8
TAR624G0544 Trochodendron aralioides HOM05D006758 ORTHO05D008326 1.1e-36 156.8 93 78.5
BcaB04g20373 Brassica carinata HOM05D006758 ORTHO05D008326 1.4e-36 156.4 95 75.8
BcaB07g31284 Brassica carinata HOM05D006758 ORTHO05D008326 1.4e-36 156.4 95 75.8
BcaC04g22349 Brassica carinata HOM05D006758 ORTHO05D008326 1.4e-36 156.4 95 75.8
A09p16650 Brassica napus HOM05D006758 ORTHO05D008326 1.4e-36 156.4 95 75.8
C09p20260 Brassica napus HOM05D006758 ORTHO05D008326 1.4e-36 156.4 95 75.8
BolC9t54931H Brassica oleracea HOM05D006758 ORTHO05D008326 1.4e-36 156.4 95 75.8
BraA09t37304Z Brassica rapa HOM05D006758 ORTHO05D008326 1.4e-36 156.4 95 75.8
Carub.0002s0329 Capsella rubella HOM05D006758 ORTHO05D008326 1.4e-36 156.4 95 75.8
CARHR050560 Cardamine hirsuta HOM05D006758 ORTHO05D008326 1.4e-36 156.4 95 75.8
Migut.M01286 Erythranthe guttata HOM05D006758 ORTHO05D008326 1.4e-36 156.4 93 77.4
Lj5g0020351 Lotus japonicus HOM05D006758 ORTHO05D008326 1.4e-36 156.4 93 77.4
Manes.17G035700 Manihot esculenta HOM05D006758 ORTHO05D008326 1.4e-36 156.4 93 77.4
CiPaw.09G087600 Carya illinoinensis HOM05D006758 ORTHO05D008326 1.8e-36 156.0 93 77.4
Pp3c2_14210 Physcomitrium patens HOM05D006758 ORTHO05D008326 1.8e-36 156.0 93 77.4
Sp2g02770 Schrenkiella parvula HOM05D006758 ORTHO05D008326 1.8e-36 156.0 95 75.8
Sed0024295 Sechium edule HOM05D006758 ORTHO05D008326 1.8e-36 156.0 93 77.4
CANSAT56G2354 Cannabis sativa HOM05D006758 ORTHO05D008326 2.4e-36 155.6 90 77.8
DCAR_008127 Daucus carota HOM05D006758 ORTHO05D008326 2.4e-36 155.6 93 77.4
Thhalv10023778m.g Eutrema salsugineum HOM05D006758 ORTHO05D008326 2.4e-36 155.6 95 75.8
Rhsim02G0111700 Rhododendron simsii HOM05D006758 ORTHO05D008326 2.4e-36 155.6 93 77.4
Sabra04G0011700 Salix brachista HOM05D006758 ORTHO05D008326 2.4e-36 155.6 90 77.8
SGA_v2.0_scaffold7G03879 Striga asiatica HOM05D006758 ORTHO05D008326 2.4e-36 155.6 93 77.4
TAR626G1807 Trochodendron aralioides HOM05D006758 ORTHO05D008326 2.4e-36 155.6 90 77.8
MELO3C007373.2 Cucumis melo HOM05D006758 ORTHO05D008326 3.1e-36 155.2 93 77.4
CsaV3_6G049220 Cucumis sativus L. HOM05D006758 ORTHO05D008326 3.1e-36 155.2 93 77.4
DCAR_004197 Daucus carota HOM05D006758 ORTHO05D008326 3.1e-36 155.2 95 75.8
MD10G1315000 Malus domestica HOM05D006758 ORTHO05D008326 3.1e-36 155.2 93 76.3
Oeu037351.1 Olea europaea HOM05D006758 ORTHO05D008326 3.1e-36 155.2 93 76.3
CDE05G3555 Ceratophyllum demersum HOM05D006758 ORTHO05D008326 4.1e-36 154.8 93 77.4
Gorai.006G083800 Gossypium raimondii HOM05D006758 ORTHO05D008326 4.1e-36 154.8 95 76.8
Hma1.2p1_2726F.1_g327620 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 4.1e-36 154.8 93 76.3
EL10Ac8g19995 Beta vulgaris HOM05D006758 ORTHO05D008326 9.1e-36 153.7 93 77.4
RcHm_v2.0_Chr5g0003931 Rosa chinensis HOM05D006758 ORTHO05D008326 9.1e-36 153.7 96 74.0
Hma1.2p1_2714F.1_g327410 Hydrangea macrophylla HOM05D006758 ORTHO05D008326 1.2e-35 153.3 93 76.3
ClCG01G022160 Citrullus lanatus HOM05D006758 ORTHO05D008326 1.5e-35 152.9 91 79.1
Lalb_Chr06g0164881 Lupinus albus HOM05D006758 ORTHO05D008326 1.5e-35 152.9 93 76.3
TWI38G0518 Tripterygium wilfordii HOM05D006758 ORTHO05D008326 1.5e-35 152.9 93 76.3
ECA234G0861 Erigeron canadensis HOM05D006758 ORTHO05D008326 2.6e-35 152.1 93 75.3
HanXRQChr16g0515881 Helianthus annuus HOM05D006758 ORTHO05D008326 2.6e-35 152.1 93 75.3
Dinv17829 Davidia involucrata HOM05D006758 ORTHO05D008326 3.5e-35 151.8 91 78.0
FvH4_3g02640 Fragaria vesca HOM05D006758 ORTHO05D008326 3.5e-35 151.8 96 72.9
Oeu051222.1 Olea europaea HOM05D006758 ORTHO05D008326 4.5e-35 151.4 88 77.3
AUR62022003 Chenopodium quinoa HOM05D006758 ORTHO05D008326 7.7e-35 150.6 93 76.3
Lsat_1_v5_gn_4_59120 Lactuca sativa HOM05D006758 ORTHO05D008326 7.7e-35 150.6 92 73.9
arahy.Tifrunner.gnm1.ann1.GJ8XD1 Arachis hypogaea HOM05D006758 ORTHO05D008326 1.3e-34 149.8 104 70.2
Actinidia11840 Actinidia chinensis HOM05D006758 ORTHO05D008326 2.9e-34 148.7 93 75.3
Sabra11G0016800 Salix brachista HOM05D006758 ORTHO05D008326 3.8e-34 148.3 93 74.2
SHI02162 Sapria himalayana HOM05D006758 ORTHO05D008326 6.5e-34 147.5 91 74.7
unitig_61.g26114 Utricularia gibba HOM05D006758 ORTHO05D008326 9.4e-33 143.7 119 60.5
CSS0030244 Camellia sinensis var. sinensis HOM05D006758 ORTHO05D008326 9.7e-30 133.7 77 77.9
Cre16.g670200 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 1.4e-28 129.8 90 64.4
Sc17g0007080 Simmondsia chinensis HOM05D006758 ORTHO05D008326 1.4e-28 129.8 75 78.7
Ah.09g235270 Amaranthus hybridus HOM05D006758 ORTHO05D008326 1.2e-27 126.7 77 75.3
Peaxi162Scf00082g10217 Petunia axillaris HOM05D006758 ORTHO05D008326 1.0e-26 123.6 95 66.3
MCO09G771 Micromonas commoda HOM05D006758 ORTHO05D008326 3.0e-23 112.1 92 54.3
Cre16.g689376 Chlamydomonas reinhardtii HOM05D006758 ORTHO05D008326 7.7e-19 97.4 71 62.0
Hund23506 Selenicereus undatus HOM05D006758 ORTHO05D008326 2.2e-18 95.9 58 75.9
A01p30660 Brassica napus HOM05D006758 ORTHO05D008326 4.8e-13 78.2 42 81.0
A01p30680 Brassica napus HOM05D006758 ORTHO05D008326 1.8e-12 76.3 42 78.6
BraA01t03197Z Brassica rapa HOM05D006758 ORTHO05D008326 1.8e-12 76.3 42 78.6
Haze_06744 Corylus avellana HOM05D006758 ORTHO05D008326 3.1e-12 75.5 51 72.5
QL05p074940 Quercus lobata HOM05D006758 ORTHO05D008326 5.4e-12 74.7 43 79.1
QL93p0073_0472 Quercus lobata HOM05D006758 ORTHO05D008326 5.4e-12 74.7 43 79.1
Ah.14g088140 Amaranthus hybridus HOM05D000097 ORTHO05D000041 9.1e-12 73.9 41 82.9
SalBow1G3298 Salvia bowleyana HOM05D006758 ORTHO05D008326 9.1e-12 73.9 41 80.5
FAN25G0357 Fragaria x ananassa HOM05D006758 ORTHO05D008326 1.6e-11 73.2 41 80.5
MBI02_g21861_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 2.7e-11 72.4 40 80.0
HPP92_000849 Vanilla planifolia HOM05D006758 ORTHO05D008326 2.7e-11 72.4 39 82.1
vmacro15829 Vaccinium macrocarpon HOM05D006758 ORTHO05D008326 5.9e-11 71.2 40 80.0
Gohir.D06G213300 Gossypium hirsutum HOM05D006758 ORTHO05D008326 7.7e-11 70.9 36 88.9
FAN21G3907 Fragaria x ananassa HOM05D006758 ORTHO05D008326 1.3e-10 70.1 38 81.6
Atru.BG.309.p Acer truncatum HOM05D006758 ORTHO05D008326 1.7e-10 69.7 39 82.1
MBI16_g27830_MAGBIO Magnolia biondii HOM05D004176 ORTHO05D008326 3.6e-08 62.0 51 58.8
MBI15_g03894_MAGBIO Magnolia biondii HOM05D006758 ORTHO05D008326 4.0e-07 58.5 49 57.1


User provided reference genes

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