Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g44540 Chara braunii HOM05D005260 ORTHO05D006390 5.4e-227 790.8 445 100.0
AagrBONN_evm.TU.Sc2ySwM_228.4055 Anthoceros agrestis HOM05D005260 ORTHO05D006390 1.7e-71 274.2 401 42.1
Nitab4.5_0008157g0020 Nicotiana tabacum HOM05D005260 ORTHO05D006390 1.9e-70 270.8 395 40.8
Potri.006G186900 Populus trichocarpa HOM05D005260 ORTHO05D006390 4.2e-70 269.6 354 45.5
Nitab4.5_0001201g0060 Nicotiana tabacum HOM05D005260 ORTHO05D006390 5.5e-70 269.2 390 42.6
QL02p092738 Quercus lobata HOM05D005260 ORTHO05D006390 7.2e-70 268.9 409 43.3
CAN.G1116.9 Capsicum annuum HOM05D005260 ORTHO05D006390 9.4e-70 268.5 392 43.1
Phvul.003G157300 Phaseolus vulgaris HOM05D005260 ORTHO05D006390 9.4e-70 268.5 389 41.9
Rhsim01G0045600 Rhododendron simsii HOM05D005260 ORTHO05D006390 9.4e-70 268.5 354 45.2
CSS0012073 Camellia sinensis var. sinensis HOM05D005260 ORTHO05D006390 1.6e-69 267.7 451 39.5
Glyma.02G202400 Glycine max HOM05D005260 ORTHO05D006390 1.6e-69 267.7 354 43.5
Potri.018G109800 Populus trichocarpa HOM05D005260 ORTHO05D006390 1.6e-69 267.7 354 43.8
Prupe.7G260500 Prunus persica HOM05D005260 ORTHO05D006390 1.6e-69 267.7 382 43.7
Sopen07g001450 Solanum pennellii HOM05D005260 ORTHO05D006390 1.6e-69 267.7 389 43.2
Solyc07g005340.2 Solanum lycopersicum HOM05D005260 ORTHO05D006390 2.1e-69 267.3 389 42.9
Peaxi162Scf00347g00088 Petunia axillaris HOM05D005260 ORTHO05D006390 2.7e-69 266.9 389 41.1
Sc18g0000130 Simmondsia chinensis HOM05D005260 ORTHO05D006390 4.7e-69 266.2 358 43.6
Sabra06G0142800 Salix brachista HOM05D005260 ORTHO05D006390 7.9e-69 265.4 354 44.6
PGSC0003DMG400003180 Solanum tuberosum HOM05D005260 ORTHO05D006390 7.9e-69 265.4 389 41.9
MD15G1155100 Malus domestica HOM05D005260 ORTHO05D006390 1.8e-68 264.2 358 45.0
Pp3c14_10930 Physcomitrium patens HOM05D005260 ORTHO05D006390 1.8e-68 264.2 384 41.1
Eucgr.C02595 Eucalyptus grandis HOM05D005260 ORTHO05D006390 2.3e-68 263.8 384 41.7
Rhsim01G0036000 Rhododendron simsii HOM05D005260 ORTHO05D006390 2.3e-68 263.8 382 43.5
FvH4_1g01150 Fragaria vesca HOM05D005260 ORTHO05D006390 3.0e-68 263.5 359 45.7
Ca_21113_v3 Cicer arietinum L. HOM05D005260 ORTHO05D006390 3.9e-68 263.1 354 44.4
Glyma.17G075400 Glycine max HOM05D005260 ORTHO05D006390 3.9e-68 263.1 354 44.4
CiPaw.15G174600 Carya illinoinensis HOM05D005260 ORTHO05D006390 5.1e-68 262.7 397 43.8
Lalb_Chr13g0300941 Lupinus albus HOM05D005260 ORTHO05D006390 2.0e-67 260.8 385 43.4
FAN19G1826 Fragaria x ananassa HOM05D005260 ORTHO05D006390 2.6e-67 260.4 365 44.4
Mapoly0043s0023 Marchantia polymorpha HOM05D005260 ORTHO05D006390 3.3e-67 260.0 452 38.9
Rhsim01G0035700 Rhododendron simsii HOM05D005260 ORTHO05D006390 3.3e-67 260.0 382 42.7
Sabra06G0141800 Salix brachista HOM05D005260 ORTHO05D006390 3.3e-67 260.0 355 44.2
Lj7P455T24 Lonicera japonica HOM05D005260 ORTHO05D006390 4.4e-67 259.6 357 44.5
TAR383G0874 Trochodendron aralioides HOM05D005260 ORTHO05D006390 4.4e-67 259.6 450 39.6
RhsimUnG0040000 Rhododendron simsii HOM05D005260 ORTHO05D006390 5.7e-67 259.2 386 43.3
Sabra18G0092700 Salix brachista HOM05D005260 ORTHO05D006390 5.7e-67 259.2 354 43.5
Lj4g0015138 Lotus japonicus HOM05D005260 ORTHO05D006390 7.4e-67 258.8 354 43.8
MELO3C010238.2 Cucumis melo HOM05D005260 ORTHO05D006390 9.7e-67 258.5 365 45.5
Psat4g008640 Pisum sativum HOM05D005260 ORTHO05D006390 9.7e-67 258.5 356 43.8
RcHm_v2.0_Chr2g0085941 Rosa chinensis HOM05D005260 ORTHO05D006390 1.3e-66 258.1 355 44.2
FAN23G1120 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.7e-66 257.7 370 43.2
CsaV3_1G028770 Cucumis sativus L. HOM05D005260 ORTHO05D006390 2.8e-66 256.9 358 45.0
VMungo1215G1942 Vigna mungo HOM05D005260 ORTHO05D006390 2.8e-66 256.9 377 47.7
Ah.11g045050 Amaranthus hybridus HOM05D005260 ORTHO05D006390 3.7e-66 256.5 383 41.5
Ciclev10008691m.g Citrus clementina HOM05D005260 ORTHO05D006390 3.7e-66 256.5 389 40.6
Manes.14G111500 Manihot esculenta HOM05D005260 ORTHO05D006390 3.7e-66 256.5 354 42.1
Aa31LG3G13860 Aethionema arabicum HOM05D005260 ORTHO05D006390 4.8e-66 256.1 444 36.7
Hma1.2p1_0028F.1_g017400 Hydrangea macrophylla HOM05D005260 ORTHO05D006390 6.3e-66 255.8 359 42.1
ECA233G0390 Erigeron canadensis HOM05D005260 ORTHO05D006390 8.2e-66 255.4 378 45.0
TPR.G9269 Trifolium pratense HOM05D005260 ORTHO05D006390 8.2e-66 255.4 354 43.8
CARHR271830 Cardamine hirsuta HOM05D005260 ORTHO05D006390 1.1e-65 255.0 357 40.6
Sp6g19700 Schrenkiella parvula HOM05D005260 ORTHO05D006390 1.1e-65 255.0 357 40.9
AT5G58020 Arabidopsis thaliana HOM05D005260 ORTHO05D006390 1.8e-65 254.2 389 38.8
Carub.0008s1857 Capsella rubella HOM05D005260 ORTHO05D006390 2.4e-65 253.8 357 40.6
Thhalv10013961m.g Eutrema salsugineum HOM05D005260 ORTHO05D006390 2.4e-65 253.8 357 39.8
Lsat_1_v5_gn_6_38260 Lactuca sativa HOM05D005260 ORTHO05D006390 2.4e-65 253.8 357 42.6
Haze_19232 Corylus avellana HOM05D005260 ORTHO05D006390 4.1e-65 253.1 354 42.4
FAN28G1391 Fragaria x ananassa HOM05D005260 ORTHO05D006390 4.1e-65 253.1 357 42.9
Duzib168G1964 Durio zibethinus HOM05D005260 ORTHO05D006390 7.0e-65 252.3 449 38.5
EL10Ac8g18850 Beta vulgaris HOM05D005260 ORTHO05D006390 1.2e-64 251.5 379 40.6
FAN26G1108 Fragaria x ananassa HOM05D005260 ORTHO05D006390 1.2e-64 251.5 355 42.5
AL8G34120 Arabidopsis lyrata HOM05D005260 ORTHO05D006390 1.5e-64 251.1 357 40.3
ClCG06G015480 Citrullus lanatus HOM05D005260 ORTHO05D006390 1.5e-64 251.1 364 44.8
SEGI_13576 Sequoiadendron giganteum HOM05D005260 ORTHO05D006390 1.5e-64 251.1 352 44.3
Cfa020845 Carpinus fangiana HOM05D005260 ORTHO05D006390 2.0e-64 250.8 354 42.1
HanXRQChr13g0397631 Helianthus annuus HOM05D005260 ORTHO05D006390 2.6e-64 250.4 376 43.6
SGA_v2.0_scaffold265G46122 Striga asiatica HOM05D005260 ORTHO05D006390 2.6e-64 250.4 354 41.2
C09p49880 Brassica napus HOM05D005260 ORTHO05D006390 4.5e-64 249.6 444 36.0
BcaC04g19916 Brassica carinata HOM05D005260 ORTHO05D006390 7.7e-64 248.8 444 36.0
PGR102G1636 Punica granatum HOM05D005260 ORTHO05D006390 7.7e-64 248.8 358 41.9
Gohir.A13G184700 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.3e-63 248.1 451 38.1
Atru.chr6.1391 Acer truncatum HOM05D005260 ORTHO05D006390 1.7e-63 247.7 357 42.0
BolC9t57839H Brassica oleracea HOM05D005260 ORTHO05D006390 1.7e-63 247.7 354 39.8
Cc06_g15200 Coffea canephora HOM05D005260 ORTHO05D006390 1.7e-63 247.7 354 43.2
PSO170G6608 Papaver somniferum HOM05D005260 ORTHO05D006390 2.9e-63 246.9 388 43.6
TWI34G1822 Tripterygium wilfordii HOM05D005260 ORTHO05D006390 2.9e-63 246.9 356 42.7
TAR625G1225 Trochodendron aralioides HOM05D005260 ORTHO05D006390 3.8e-63 246.5 446 37.0
Duzib150G0891 Durio zibethinus HOM05D005260 ORTHO05D006390 5.0e-63 246.1 405 39.8
Oeu051690.1 Olea europaea HOM05D005260 ORTHO05D006390 5.0e-63 246.1 381 41.5
Thecc.09G033300 Theobroma cacao HOM05D005260 ORTHO05D006390 5.0e-63 246.1 385 41.3
Atru.chr7.58 Acer truncatum HOM05D005260 ORTHO05D006390 6.5e-63 245.7 389 40.4
A10p16150 Brassica napus HOM05D005260 ORTHO05D006390 6.5e-63 245.7 354 39.8
Migut.J01331 Erythranthe guttata HOM05D005260 ORTHO05D006390 1.1e-62 245.0 354 41.2
Gorai.013G217000 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.1e-62 245.0 451 37.7
MSTRG.6120 Avicennia marina HOM05D005260 ORTHO05D006390 1.5e-62 244.6 383 40.7
Gohir.D13G191100 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.5e-62 244.6 450 37.8
BraA10t43614Z Brassica rapa HOM05D005260 ORTHO05D006390 1.9e-62 244.2 354 40.1
Cpa.g.sc46.130 Carica papaya HOM05D005260 ORTHO05D006390 3.2e-62 243.4 356 41.6
Oeu050475.1 Olea europaea HOM05D005260 ORTHO05D006390 3.2e-62 243.4 381 40.9
PSO017G5909 Papaver somniferum HOM05D005260 ORTHO05D006390 3.2e-62 243.4 364 44.8
ATR0739G050 Amborella trichopoda HOM05D005260 ORTHO05D006390 5.5e-62 242.7 357 42.3
BolC2t07483H Brassica oleracea HOM05D005260 ORTHO05D006390 5.5e-62 242.7 357 40.9
Os06g0183900 Oryza sativa ssp. japonica HOM05D005260 ORTHO05D006390 5.5e-62 242.7 367 42.0
Sed0012515 Sechium edule HOM05D005260 ORTHO05D006390 5.5e-62 242.7 356 45.8
BcaB05g22395 Brassica carinata HOM05D005260 ORTHO05D006390 7.2e-62 242.3 357 40.3
A02p08050 Brassica napus HOM05D005260 ORTHO05D006390 9.4e-62 241.9 354 40.4
GSVIVG01023592001 Vitis vinifera HOM05D005260 ORTHO05D006390 3.6e-61 240.0 374 40.4
THA.LOC104817828 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 8.0e-61 238.8 354 39.5
MBI14_g37102_MAGBIO Magnolia biondii HOM05D005260 ORTHO05D006390 1.0e-60 238.4 347 43.2
Medtr4g131190 Medicago truncatula HOM05D005260 ORTHO05D006390 1.0e-60 238.4 397 40.1
Gorai.006G273400 Gossypium raimondii HOM05D005260 ORTHO05D006390 1.4e-60 238.0 384 39.6
SMO307G0072 Selaginella moellendorffii HOM05D005260 ORTHO05D006390 1.4e-60 238.0 356 39.3
C02p13690 Brassica napus HOM05D005260 ORTHO05D006390 3.0e-60 236.9 357 40.1
BraA02t05877Z Brassica rapa HOM05D005260 ORTHO05D006390 3.0e-60 236.9 354 39.8
SalBow1G8640 Salvia bowleyana HOM05D005260 ORTHO05D006390 5.2e-60 236.1 374 39.3
SHI04751 Sapria himalayana HOM05D005260 ORTHO05D006390 8.8e-60 235.3 356 39.3
Aqoxy3G00834 Aquilegia oxysepala HOM05D005260 ORTHO05D006390 1.7e-58 231.1 357 42.0
AUR62031434 Chenopodium quinoa HOM05D005260 ORTHO05D006390 4.8e-58 229.6 221 52.9
THA.LOC104817826 Tarenaya hassleriana HOM05D005260 ORTHO05D006390 4.8e-58 229.6 356 39.6
Actinidia04287 Actinidia chinensis HOM05D005260 ORTHO05D006390 9.1e-57 225.3 364 38.7
DCAR_020883 Daucus carota HOM05D005260 ORTHO05D006390 7.7e-56 222.2 329 41.0
COL.COLO4_18779 Corchorus olitorius HOM05D005260 ORTHO05D006390 2.9e-55 220.3 451 36.1
AUR62021106 Chenopodium quinoa HOM05D005260 ORTHO05D006390 2.5e-54 217.2 205 53.7
Gohir.D09G249000 Gossypium hirsutum HOM05D005260 ORTHO05D006390 6.1e-45 186.0 335 36.4
SGA_v2.0_scaffold45G17044 Striga asiatica HOM05D005260 ORTHO05D006390 6.1e-45 186.0 374 34.8
CiPaw.16G114800 Carya illinoinensis HOM05D005260 ORTHO05D006390 4.0e-44 183.3 332 38.3
Actinidia38337 Actinidia chinensis HOM05D005260 ORTHO05D006390 5.7e-43 179.5 167 52.1
Dinv42879 Davidia involucrata HOM05D005260 ORTHO05D006390 3.7e-42 176.8 191 47.6
Dinv43221 Davidia involucrata HOM05D005260 ORTHO05D006390 3.7e-42 176.8 191 47.6
Cre03.g150650 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 1.7e-39 167.9 236 41.1
Gohir.D07G030400 Gossypium hirsutum HOM05D005260 ORTHO05D006390 1.2e-37 161.8 340 33.5
Gorai.001G031600 Gossypium raimondii HOM05D005260 ORTHO05D006390 2.8e-37 160.6 340 33.2
PRCOL_00003864 Prasinoderma coloniale HOM05D005260 ORTHO05D006390 3.2e-33 147.1 189 43.4
Lalb_Chr12g0198621 Lupinus albus HOM05D005260 ORTHO05D006390 3.6e-29 133.7 252 44.8
unitig_0.g2819 Utricularia gibba HOM05D005260 ORTHO05D006390 1.7e-26 124.8 268 31.7
HPP92_018747 Vanilla planifolia HOM05D005260 ORTHO05D006390 9.2e-25 119.0 232 36.6
AagrBONN_evm.TU.Sc2ySwM_344.4069 Anthoceros agrestis HOM05D005260 ORTHO05D006390 6.6e-23 112.8 227 38.8
HPP92_018748 Vanilla planifolia HOM05D005260 ORTHO05D006390 1.3e-18 98.6 83 56.6
HanXRQChr09g0262911 Helianthus annuus HOM05D005260 ORTHO05D006390 2.4e-17 94.4 75 50.7
CDE02G0414 Ceratophyllum demersum HOM05D005260 ORTHO05D006390 5.6e-14 83.2 224 30.4
MELO3C004727.2 Cucumis melo HOM05D005260 ORTHO05D006390 4.7e-13 80.1 59 62.7
ATR0579G027 Amborella trichopoda HOM05D005260 ORTHO05D006390 4.0e-12 77.0 86 47.7
Zm00001eb158280 Zea mays HOM05D005260 ORTHO05D006390 4.4e-11 73.6 65 49.2
MCO05G557 Micromonas commoda HOM05D005260 ORTHO05D006390 1.7e-10 71.6 225 28.0
CBR_g37538 Chara braunii HOM05D005260 ORTHO05D006390 6.6e-07 59.7 230 22.6
Cre17.g715950 Chlamydomonas reinhardtii HOM05D005260 ORTHO05D006390 6.6e-07 59.7 165 27.9
BolC3t13905H Brassica oleracea HOM05D005260 ORTHO05D006390 8.6e-07 59.3 46 63.0
TAR625G0635 Trochodendron aralioides HOM05D005260 ORTHO05D006390 1.5e-06 58.5 187 31.0
CiPaw.12G098000 Carya illinoinensis HOM05D003547 ORTHO05D004236 5.6e-06 56.6 64 46.9


User provided reference genes

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