Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g44435 Chara braunii HOM05D007166 ORTHO05D009039 6.1e-87 324.3 188 100.0
AagrBONN_evm.TU.Sc2ySwM_369.321 Anthoceros agrestis HOM05D007166 ORTHO05D009039 6.2e-31 138.3 126 66.7
SMO165G0060 Selaginella moellendorffii HOM05D007166 ORTHO05D009039 3.1e-30 136.0 144 63.9
Pp3c22_16100 Physcomitrium patens HOM05D007166 ORTHO05D009039 4.0e-30 135.6 123 66.7
Pp3s104_40 Physcomitrium patens HOM05D007166 ORTHO05D009039 4.0e-30 135.6 192 54.2
PSO170G1901 Papaver somniferum HOM05D007166 ORTHO05D009039 4.4e-29 132.1 125 67.2
Mapoly0005s0157 Marchantia polymorpha HOM05D007166 ORTHO05D009039 7.6e-29 131.3 164 58.5
PSO700G0103 Papaver somniferum HOM05D007166 ORTHO05D009039 3.8e-28 129.0 125 66.4
Cc10_g01790 Coffea canephora HOM05D007166 ORTHO05D009039 6.4e-28 128.3 124 64.5
ECA232G5036 Erigeron canadensis HOM05D007166 ORTHO05D009039 1.1e-27 127.5 122 64.8
QL02p011380 Quercus lobata HOM05D007166 ORTHO05D009039 1.4e-27 127.1 127 64.6
unitig_46.g17964 Utricularia gibba HOM05D007166 ORTHO05D009039 1.4e-27 127.1 149 55.0
Glyma.14G218200 Glycine max HOM05D007166 ORTHO05D009039 2.4e-27 126.3 110 68.2
HanXRQChr05g0146521 Helianthus annuus HOM05D007166 ORTHO05D009039 7.1e-27 124.8 110 69.1
Potri.002G023600 Populus trichocarpa HOM05D007166 ORTHO05D009039 7.1e-27 124.8 130 63.1
Prupe.1G367000 Prunus persica HOM05D007166 ORTHO05D009039 7.1e-27 124.8 127 63.0
Migut.C00807 Erythranthe guttata HOM05D007166 ORTHO05D009039 9.2e-27 124.4 168 53.6
Solyc04g081320.4 Solanum lycopersicum HOM05D007166 ORTHO05D009039 9.2e-27 124.4 110 66.4
CAN.G311.15 Capsicum annuum HOM05D007166 ORTHO05D009039 1.2e-26 124.0 138 58.7
Duzib093G1587 Durio zibethinus HOM05D007166 ORTHO05D009039 1.2e-26 124.0 131 64.1
Oeu007334.1 Olea europaea HOM05D007166 ORTHO05D009039 1.2e-26 124.0 150 55.3
Peaxi162Scf00438g00619 Petunia axillaris HOM05D007166 ORTHO05D009039 1.2e-26 124.0 129 62.8
Sabra02G0019200 Salix brachista HOM05D007166 ORTHO05D009039 1.2e-26 124.0 156 55.1
Sopen04g034940 Solanum pennellii HOM05D007166 ORTHO05D009039 1.2e-26 124.0 124 62.9
TPR.G34359 Trifolium pratense HOM05D007166 ORTHO05D009039 1.6e-26 123.6 110 66.4
VMungo0647G2551 Vigna mungo HOM05D007166 ORTHO05D009039 1.6e-26 123.6 110 67.3
PGR031G2037 Punica granatum HOM05D007166 ORTHO05D009039 2.7e-26 122.9 141 58.2
RcHm_v2.0_Chr6g0302691 Rosa chinensis HOM05D007166 ORTHO05D009039 2.7e-26 122.9 125 62.4
Dinv31833 Davidia involucrata HOM05D007166 ORTHO05D009039 3.5e-26 122.5 131 61.1
Gorai.010G005000 Gossypium raimondii HOM05D007166 ORTHO05D009039 3.5e-26 122.5 126 65.9
MD15G1013500 Malus domestica HOM05D007166 ORTHO05D009039 3.5e-26 122.5 124 62.1
Atru.chr13.311 Acer truncatum HOM05D007166 ORTHO05D009039 4.6e-26 122.1 109 67.0
Phvul.001G007500 Phaseolus vulgaris HOM05D007166 ORTHO05D009039 4.6e-26 122.1 110 66.4
COL.COLO4_26159 Corchorus olitorius HOM05D007166 ORTHO05D009039 6.0e-26 121.7 124 62.9
Gohir.A06G004800 Gossypium hirsutum HOM05D007166 ORTHO05D009039 6.0e-26 121.7 123 62.6
Gohir.D06G000600 Gossypium hirsutum HOM05D007166 ORTHO05D009039 6.0e-26 121.7 126 65.9
Medtr1g024840 Medicago truncatula HOM05D007166 ORTHO05D009039 6.0e-26 121.7 110 66.4
HPP92_015209 Vanilla planifolia HOM05D007166 ORTHO05D009039 6.0e-26 121.7 126 60.3
CiPaw.08G065500 Carya illinoinensis HOM05D007166 ORTHO05D009039 7.8e-26 121.3 129 62.8
Lalb_Chr22g0354371 Lupinus albus HOM05D007166 ORTHO05D009039 7.8e-26 121.3 110 65.5
CSS0019896 Camellia sinensis var. sinensis HOM05D007166 ORTHO05D009039 1.0e-25 120.9 124 62.1
Haze_22621 Corylus avellana HOM05D007166 ORTHO05D009039 1.0e-25 120.9 128 60.2
DCAR_017474 Daucus carota HOM05D007166 ORTHO05D009039 1.0e-25 120.9 126 61.1
Os03g0244000 Oryza sativa ssp. japonica HOM05D007166 ORTHO05D009039 1.0e-25 120.9 139 56.8
BcaC03g15610 Brassica carinata HOM05D007166 ORTHO05D009039 1.3e-25 120.6 126 61.9
BcaC08g47053 Brassica carinata HOM05D007166 ORTHO05D009039 1.3e-25 120.6 121 62.8
AL2G35670 Arabidopsis lyrata HOM05D007166 ORTHO05D009039 1.7e-25 120.2 126 61.1
CANSAT25G3739 Cannabis sativa HOM05D007166 ORTHO05D009039 1.7e-25 120.2 123 60.2
CARHR069090 Cardamine hirsuta HOM05D007166 ORTHO05D009039 1.7e-25 120.2 128 60.9
CDE02G4515 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 1.7e-25 120.2 123 61.0
Glyma.17G257400 Glycine max HOM05D007166 ORTHO05D009039 1.7e-25 120.2 136 58.8
AT1G75690 Arabidopsis thaliana HOM05D007166 ORTHO05D009039 2.3e-25 119.8 123 61.8
MSTRG.1201 Avicennia marina HOM05D007166 ORTHO05D009039 2.3e-25 119.8 124 61.3
Lsat_1_v5_gn_9_46261 Lactuca sativa HOM05D007166 ORTHO05D009039 2.3e-25 119.8 141 58.2
Rhsim06G0022200 Rhododendron simsii HOM05D007166 ORTHO05D009039 2.3e-25 119.8 110 67.3
Sp5g30800 Schrenkiella parvula HOM05D007166 ORTHO05D009039 2.3e-25 119.8 123 61.8
Carub.0002s2253 Capsella rubella HOM05D007166 ORTHO05D009039 6.6e-25 118.2 110 64.5
Lj5g0017261 Lotus japonicus HOM05D007166 ORTHO05D009039 6.6e-25 118.2 118 64.4
GSVIVG01009888001 Vitis vinifera HOM05D007166 ORTHO05D009039 6.6e-25 118.2 138 59.4
FAN15G1492 Fragaria x ananassa HOM05D007166 ORTHO05D009039 8.6e-25 117.9 107 67.3
THA.LOC104813791 Tarenaya hassleriana HOM05D007166 ORTHO05D009039 1.1e-24 117.5 141 58.2
Aa31LG4G5920 Aethionema arabicum HOM05D007166 ORTHO05D009039 1.5e-24 117.1 110 64.5
Thhalv10019268m.g Eutrema salsugineum HOM05D007166 ORTHO05D009039 1.5e-24 117.1 128 60.9
Potri.005G237800 Populus trichocarpa HOM05D007166 ORTHO05D009039 1.9e-24 116.7 123 63.4
Zm00001eb081060 Zea mays HOM05D007166 ORTHO05D009039 2.5e-24 116.3 140 55.7
Duzib116G0210 Durio zibethinus HOM05D007166 ORTHO05D009039 3.3e-24 115.9 154 55.8
Thecc.08G042800 Theobroma cacao HOM05D007166 ORTHO05D009039 3.3e-24 115.9 164 53.0
FAN20G1945 Fragaria x ananassa HOM05D007166 ORTHO05D009039 4.3e-24 115.5 136 58.1
Eucgr.F00601 Eucalyptus grandis HOM05D007166 ORTHO05D009039 5.6e-24 115.2 133 57.1
MELO3C003759.2 Cucumis melo HOM05D007166 ORTHO05D009039 9.6e-24 114.4 160 53.1
CsaV3_3G045770 Cucumis sativus L. HOM05D007166 ORTHO05D009039 4.7e-23 112.1 160 52.5
MD08G1014000 Malus domestica HOM05D007166 ORTHO05D009039 4.7e-23 112.1 120 60.8
Sed0018016 Sechium edule HOM05D007166 ORTHO05D009039 4.7e-23 112.1 160 51.9
FvH4_2g38630 Fragaria vesca HOM05D007166 ORTHO05D009039 6.2e-23 111.7 118 61.0
A02p20150 Brassica napus HOM05D007166 ORTHO05D009039 1.4e-22 110.5 120 60.0
BraA02t07050Z Brassica rapa HOM05D007166 ORTHO05D009039 1.4e-22 110.5 120 60.0
PGSC0003DMG400003776 Solanum tuberosum HOM05D007166 ORTHO05D009039 1.4e-22 110.5 143 39.9
C02p33780 Brassica napus HOM05D007166 ORTHO05D009039 1.8e-22 110.2 119 60.5
BolC2t09326H Brassica oleracea HOM05D007166 ORTHO05D009039 1.8e-22 110.2 119 60.5
BolC6t40002H Brassica oleracea HOM05D007166 ORTHO05D009039 1.8e-22 110.2 114 61.4
Actinidia15414 Actinidia chinensis HOM05D007166 ORTHO05D009039 4.0e-22 109.0 120 60.0
Lj4A797T62 Lonicera japonica HOM05D007166 ORTHO05D009039 6.9e-22 108.2 148 52.7
BraA07t31656Z Brassica rapa HOM05D007166 ORTHO05D009039 9.0e-22 107.8 134 56.0
Nn5g29333 Nelumbo nucifera HOM05D007166 ORTHO05D009039 9.0e-22 107.8 104 62.5
ClCG05G018350 Citrullus lanatus HOM05D007166 ORTHO05D009039 2.0e-21 106.7 154 53.2
TWI56G1425 Tripterygium wilfordii HOM05D007166 ORTHO05D009039 3.4e-21 105.9 122 59.0
TAR628G0810 Trochodendron aralioides HOM05D007166 ORTHO05D009039 3.4e-21 105.9 115 60.9
A07p41210 Brassica napus HOM05D007166 ORTHO05D009039 7.6e-21 104.8 154 52.6
C06p49630 Brassica napus HOM05D007166 ORTHO05D009039 7.6e-21 104.8 150 52.7
EL10Ac5g11627 Beta vulgaris HOM05D007166 ORTHO05D009039 1.3e-20 104.0 175 49.7
SGA_v2.0_scaffold92G28245 Striga asiatica HOM05D007166 ORTHO05D009039 4.9e-20 102.1 157 49.7
Manes.18G014600 Manihot esculenta HOM05D007166 ORTHO05D009039 1.1e-19 100.9 126 56.3
arahy.Tifrunner.gnm1.ann1.74SAHL Arachis hypogaea HOM05D007166 ORTHO05D009039 1.9e-19 100.1 157 50.3
Ciclev10002412m.g Citrus clementina HOM05D007166 ORTHO05D009039 5.6e-16 88.6 139 39.6
CDE02G3586 Ceratophyllum demersum HOM05D007166 ORTHO05D009039 4.8e-15 85.5 73 49.3
Nitab4.5_0001540g0050 Nicotiana tabacum HOM05D007166 ORTHO05D009039 1.3e-12 77.4 117 37.6
BcaB05g24933 Brassica carinata HOM05D007166 ORTHO05D009039 1.7e-12 77.0 112 39.3
AUR62036485 Chenopodium quinoa HOM05D007166 ORTHO05D009039 2.9e-12 76.3 103 55.3
Cpa.g.sc1059.4 Carica papaya HOM05D007166 ORTHO05D009039 1.2e-10 70.9 62 48.4
HPP92_015221 Vanilla planifolia HOM05D007166 ORTHO05D009039 2.1e-10 70.1 58 50.0
Cfa013938 Carpinus fangiana HOM05D007166 ORTHO05D009039 3.5e-10 69.3 153 31.4
AUR62037091 Chenopodium quinoa HOM05D007166 ORTHO05D009039 1.6e-07 60.5 75 37.3
arahy.Tifrunner.gnm1.ann1.MS74EG Arachis hypogaea HOM05D007166 ORTHO05D009039 3.7e-07 59.3 110 32.7
ATR0912G003 Amborella trichopoda HOM05D007166 ORTHO05D009039 6.2e-07 58.5 58 48.3


User provided reference genes

Program Settings