Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g41808 Chara braunii HOM05D007396 ORTHO05D009228 0.0e+00 1401.3 762 100.0
GSVIVG01029532001 Vitis vinifera HOM05D007396 ORTHO05D009228 1.6e-53 215.3 243 47.7
Sopen03g032560 Solanum pennellii HOM05D007396 ORTHO05D009228 9.8e-51 206.1 264 41.7
CAN.G999.17 Capsicum annuum HOM05D007396 ORTHO05D009228 1.7e-50 205.3 268 42.2
Solyc03g113510.2 Solanum lycopersicum HOM05D007396 ORTHO05D009228 2.2e-50 204.9 264 41.3
Medtr2g105720 Medicago truncatula HOM05D007396 ORTHO05D009228 2.8e-50 204.5 220 48.6
AUR62001321 Chenopodium quinoa HOM05D007396 ORTHO05D009228 3.7e-50 204.1 270 41.1
PGSC0003DMG400024566 Solanum tuberosum HOM05D007396 ORTHO05D009228 6.3e-50 203.4 264 41.7
Cc02_g09240 Coffea canephora HOM05D007396 ORTHO05D009228 1.4e-49 202.2 275 41.5
CANSAT01G2937 Cannabis sativa HOM05D007396 ORTHO05D009228 2.4e-49 201.4 233 43.8
MBI13_g34300_MAGBIO Magnolia biondii HOM05D007396 ORTHO05D009228 7.0e-49 199.9 220 45.0
Migut.M00713 Erythranthe guttata HOM05D007396 ORTHO05D009228 1.2e-48 199.1 232 44.8
Gohir.A02G117900 Gossypium hirsutum HOM05D007396 ORTHO05D009228 1.2e-48 199.1 222 47.3
AUR62025704 Chenopodium quinoa HOM05D007396 ORTHO05D009228 1.6e-48 198.7 297 38.0
PGR031G2036 Punica granatum HOM05D007396 ORTHO05D009228 1.6e-48 198.7 284 42.3
Aqoxy2G02658 Aquilegia oxysepala HOM05D007396 ORTHO05D009228 7.8e-48 196.4 278 40.6
Nitab4.5_0005451g0030 Nicotiana tabacum HOM05D007396 ORTHO05D009228 7.8e-48 196.4 272 40.8
Actinidia31122 Actinidia chinensis HOM05D007396 ORTHO05D009228 1.3e-47 195.7 221 44.3
TWI12G0468 Tripterygium wilfordii HOM05D007396 ORTHO05D009228 1.3e-47 195.7 270 40.4
vmacro00415 Vaccinium macrocarpon HOM05D007396 ORTHO05D009228 1.3e-47 195.7 264 40.2
HPP92_017379 Vanilla planifolia HOM05D007396 ORTHO05D009228 1.3e-47 195.7 279 41.2
Hund05665 Selenicereus undatus HOM05D007396 ORTHO05D009228 2.9e-47 194.5 268 39.9
Nitab4.5_0000642g0070 Nicotiana tabacum HOM05D007396 ORTHO05D009228 5.0e-47 193.7 272 40.1
SalBow6G2527 Salvia bowleyana HOM05D007396 ORTHO05D009228 5.0e-47 193.7 251 41.8
RcHm_v2.0_Chr2g0149061 Rosa chinensis HOM05D007396 ORTHO05D009228 6.6e-47 193.4 222 45.0
FvH4_6g36570 Fragaria vesca HOM05D007396 ORTHO05D009228 1.1e-46 192.6 222 45.0
FAN09G0647 Fragaria x ananassa HOM05D007396 ORTHO05D009228 1.1e-46 192.6 222 45.0
FAN14G5522 Fragaria x ananassa HOM05D000163 ORTHO05D009228 1.5e-46 192.2 222 44.6
Cpa.g.sc176.25 Carica papaya HOM05D007396 ORTHO05D009228 1.9e-46 191.8 283 38.5
COL.COLO4_38280 Corchorus olitorius HOM05D007396 ORTHO05D009228 3.3e-46 191.0 276 39.5
HanXRQChr06g0173121 Helianthus annuus HOM05D007396 ORTHO05D009228 3.3e-46 191.0 221 44.3
EL10Ac7g18125 Beta vulgaris HOM05D007396 ORTHO05D009228 4.3e-46 190.7 260 39.6
Aa31LG7G1230 Aethionema arabicum HOM05D007396 ORTHO05D009228 5.6e-46 190.3 222 44.6
ECA233G2395 Erigeron canadensis HOM05D007396 ORTHO05D009228 5.6e-46 190.3 280 38.6
Manes.06G178800 Manihot esculenta HOM05D007396 ORTHO05D009228 1.2e-45 189.1 245 43.3
CiPaw.01G206900 Carya illinoinensis HOM05D007396 ORTHO05D009228 1.6e-45 188.7 220 44.5
Sc05g0005440 Simmondsia chinensis HOM05D007396 ORTHO05D009228 1.6e-45 188.7 200 46.5
CDE06G1120 Ceratophyllum demersum HOM05D007396 ORTHO05D009228 2.1e-45 188.3 243 42.0
FAN02G1321 Fragaria x ananassa HOM05D000163 ORTHO05D000219 2.1e-45 188.3 247 42.1
Gorai.003G062400 Gossypium raimondii HOM05D007396 ORTHO05D009228 2.1e-45 188.3 221 45.7
PSO063G4472 Papaver somniferum HOM05D007396 ORTHO05D009228 2.1e-45 188.3 304 38.5
PSO170G5362 Papaver somniferum HOM05D007396 ORTHO05D009228 2.8e-45 188.0 301 38.2
CsaV3_4G028760 Cucumis sativus L. HOM05D007396 ORTHO05D009228 3.6e-45 187.6 260 41.9
Gohir.D03G058600 Gossypium hirsutum HOM05D007396 ORTHO05D009228 3.6e-45 187.6 221 46.2
Lsat_1_v5_gn_4_106220 Lactuca sativa HOM05D007396 ORTHO05D009228 3.6e-45 187.6 220 43.2
DCAR_005735 Daucus carota HOM05D007396 ORTHO05D009228 6.1e-45 186.8 271 39.1
SEGI_29070 Sequoiadendron giganteum HOM05D007396 ORTHO05D009228 1.4e-44 185.7 226 44.2
Cfa003427 Carpinus fangiana HOM05D007396 ORTHO05D009228 2.3e-44 184.9 253 41.9
Nn8g41117 Nelumbo nucifera HOM05D007396 ORTHO05D009228 2.3e-44 184.9 294 39.1
Eucgr.E02321 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.1e-44 184.5 274 39.4
Sp1g14920 Schrenkiella parvula HOM05D007396 ORTHO05D009228 3.1e-44 184.5 224 43.8
Os02g0140800 Oryza sativa ssp. japonica HOM05D007396 ORTHO05D009228 5.2e-44 183.7 304 37.8
Zm00001eb328020 Zea mays HOM05D007396 ORTHO05D009228 5.2e-44 183.7 303 37.3
C08p17550 Brassica napus HOM05D000163 ORTHO05D009228 6.8e-44 183.3 186 49.5
BolC8t49381H Brassica oleracea HOM05D000163 ORTHO05D000219 6.8e-44 183.3 186 48.9
Eucgr.E02613 Eucalyptus grandis HOM05D007396 ORTHO05D009228 8.9e-44 183.0 274 39.4
SGA_v2.0_scaffold71G23969 Striga asiatica HOM05D000927 ORTHO05D009228 8.9e-44 183.0 252 42.1
A08p31280 Brassica napus HOM05D000163 ORTHO05D000219 1.5e-43 182.2 271 38.7
Ciclev10013937m.g Citrus clementina HOM05D007396 ORTHO05D009228 1.5e-43 182.2 274 38.7
Eucgr.E02270 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.5e-43 182.2 274 39.1
Thhalv10009697m.g Eutrema salsugineum HOM05D007396 ORTHO05D009228 2.0e-43 181.8 223 43.5
Haze_16206 Corylus avellana HOM05D007396 ORTHO05D009228 2.6e-43 181.4 219 43.4
Psat5g306960 Pisum sativum HOM05D007396 ORTHO05D009228 2.6e-43 181.4 236 42.8
AT1G16770 Arabidopsis thaliana HOM05D007396 ORTHO05D009228 3.4e-43 181.0 279 38.0
BraA08t35051Z Brassica rapa HOM05D000163 ORTHO05D000219 4.4e-43 180.6 268 38.8
Prupe.3G025300 Prunus persica HOM05D007396 ORTHO05D009228 4.4e-43 180.6 275 39.3
THA.LOC104812337 Tarenaya hassleriana HOM05D007396 ORTHO05D009228 4.4e-43 180.6 225 44.0
ClCG07G014720 Citrullus lanatus HOM05D007396 ORTHO05D009228 5.8e-43 180.3 223 43.9
Sed0010526 Sechium edule HOM05D007396 ORTHO05D009228 9.8e-43 179.5 275 38.2
Oeu045511.1 Olea europaea HOM05D007396 ORTHO05D009228 1.7e-42 178.7 259 40.2
CARHR017230 Cardamine hirsuta HOM05D007396 ORTHO05D009228 2.2e-42 178.3 273 39.2
AL1G28940 Arabidopsis lyrata HOM05D007396 ORTHO05D009228 4.9e-42 177.2 262 38.5
Eucgr.E02934 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.4e-42 176.8 271 38.0
Duzib192G0415 Durio zibethinus HOM05D007396 ORTHO05D009228 1.1e-41 176.0 263 39.2
MD17G1161100 Malus domestica HOM05D007396 ORTHO05D009228 1.6e-40 172.2 235 42.1
CSS0031419 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 4.6e-40 170.6 224 41.1
Carub.0001s1651 Capsella rubella HOM05D007396 ORTHO05D009228 6.0e-40 170.2 279 38.0
BcaB03g13031 Brassica carinata HOM05D007396 ORTHO05D009228 3.0e-39 167.9 286 38.8
QL03p030511 Quercus lobata HOM05D007396 ORTHO05D009228 6.6e-39 166.8 183 45.4
CSS0029409 Camellia sinensis var. sinensis HOM05D007396 ORTHO05D009228 1.6e-37 162.2 182 45.1
Pp3c5_8210 Physcomitrium patens HOM05D007396 ORTHO05D009228 2.8e-37 161.4 222 40.5
ATR0626G334 Amborella trichopoda HOM05D007396 ORTHO05D009228 2.3e-36 158.3 178 44.9
Eucgr.E02145 Eucalyptus grandis HOM05D007396 ORTHO05D009228 5.2e-36 157.1 270 36.7
BcaC07g38814 Brassica carinata HOM05D007396 ORTHO05D009228 6.8e-36 156.8 170 46.5
Eucgr.E02217 Eucalyptus grandis HOM05D007396 ORTHO05D009228 7.5e-35 153.3 194 43.3
Eucgr.E02947 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.1e-33 149.4 271 35.8
MELO3C032656.2 Cucumis melo HOM05D007396 ORTHO05D009228 2.4e-33 148.3 148 51.4
Eucgr.E02931 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.9e-31 141.0 216 37.5
unitig_32.g11080 Utricularia gibba HOM05D007396 ORTHO05D009228 1.1e-30 139.4 203 39.9
Eucgr.E02226 Eucalyptus grandis HOM05D007396 ORTHO05D009228 1.9e-30 138.7 185 42.7
Eucgr.E02284 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.2e-29 133.7 271 35.8
Thecc.06G054000 Theobroma cacao HOM05D007396 ORTHO05D009228 1.7e-26 125.6 139 46.8
BcaC05g25536 Brassica carinata HOM05D007396 ORTHO05D009228 6.4e-26 123.6 226 35.0
Eucgr.E02214 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.5e-24 117.9 183 41.0
Potri.014G003300 Populus trichocarpa HOM05D007396 ORTHO05D009228 1.3e-23 115.9 253 32.8
Eucgr.J03193 Eucalyptus grandis HOM05D007396 ORTHO05D009228 3.9e-23 114.4 234 33.3
Cre07.g325721 Chlamydomonas reinhardtii HOM05D007396 ORTHO05D009228 6.6e-23 113.6 183 38.3
Eucgr.E02162 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.8e-21 108.2 271 30.6
Eucgr.E02547 Eucalyptus grandis HOM05D007396 ORTHO05D009228 2.8e-21 108.2 192 34.9
Eucgr.E02918 Eucalyptus grandis HOM05D007396 ORTHO05D009228 6.6e-15 87.0 163 36.2
Lj7C720T3 Lonicera japonica HOM05D007396 ORTHO05D009228 1.6e-08 65.9 105 38.1
Sabra14G0002100 Salix brachista HOM05D007396 ORTHO05D009228 1.7e-07 62.4 95 34.7


User provided reference genes

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