Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g41625 Chara braunii HOM05D007072 ORTHO05D008841 4.8e-208 727.6 377 100.0
CBR_g41627 Chara braunii HOM05D003701 ORTHO05D004771 9.8e-36 155.2 122 66.4
Pp3c8_18010 Physcomitrium patens HOM05D007072 ORTHO05D008841 2.3e-32 144.1 138 50.7
Prupe.1G013400 Prunus persica HOM05D007072 ORTHO05D008841 3.6e-30 136.7 142 50.0
CANSAT78G1446 Cannabis sativa HOM05D007072 ORTHO05D008841 3.1e-29 133.7 134 47.0
Sc19g0004160 Simmondsia chinensis HOM05D007072 ORTHO05D008841 3.1e-29 133.7 129 48.8
Manes.03G178700 Manihot esculenta HOM05D007072 ORTHO05D008841 6.8e-29 132.5 139 46.0
Ah.04g154560 Amaranthus hybridus HOM05D007072 ORTHO05D008841 8.9e-29 132.1 132 50.0
Eucgr.L01273 Eucalyptus grandis HOM05D007072 ORTHO05D008841 8.9e-29 132.1 142 47.2
Peaxi162Scf00092g01012 Petunia axillaris HOM05D007072 ORTHO05D008841 8.9e-29 132.1 139 46.8
COL.COLO4_04736 Corchorus olitorius HOM05D007072 ORTHO05D008841 1.5e-28 131.3 140 47.1
Mapoly0045s0091 Marchantia polymorpha HOM05D007072 ORTHO05D008841 1.5e-28 131.3 119 51.3
PSO675G2050 Papaver somniferum HOM05D007072 ORTHO05D008841 1.5e-28 131.3 122 52.5
DCAR_030636 Daucus carota HOM05D007072 ORTHO05D008841 2.0e-28 131.0 143 46.2
Eucgr.L02492 Eucalyptus grandis HOM05D007072 ORTHO05D008841 2.0e-28 131.0 142 47.2
Dinv13993 Davidia involucrata HOM05D007072 ORTHO05D008841 4.4e-28 129.8 143 46.9
QL06p002505 Quercus lobata HOM05D007072 ORTHO05D008841 4.4e-28 129.8 142 45.8
AUR62033624 Chenopodium quinoa HOM05D007072 ORTHO05D008841 5.8e-28 129.4 139 46.8
THA.LOC104800963 Tarenaya hassleriana HOM05D007072 ORTHO05D008841 5.8e-28 129.4 134 48.5
CiPaw.01G165800 Carya illinoinensis HOM05D007072 ORTHO05D008841 7.5e-28 129.0 133 48.1
CsaV3_7G022520 Cucumis sativus L. HOM05D007072 ORTHO05D008841 7.5e-28 129.0 142 47.2
CAN.G490.4 Capsicum annuum HOM05D007072 ORTHO05D008841 1.3e-27 128.3 138 45.7
HanXRQChr03g0062521 Helianthus annuus HOM05D007072 ORTHO05D008841 1.3e-27 128.3 132 48.5
unitig_32.g10817 Utricularia gibba HOM05D005563 ORTHO05D006667 1.3e-27 128.3 132 49.2
CSS0014065 Camellia sinensis var. sinensis HOM05D007072 ORTHO05D008841 1.7e-27 127.9 129 48.1
Haze_03895 Corylus avellana HOM05D007072 ORTHO05D008841 1.7e-27 127.9 143 46.2
MELO3C012648.2 Cucumis melo HOM05D007072 ORTHO05D008841 1.7e-27 127.9 142 46.5
EL10Ac2g03959 Beta vulgaris HOM05D007072 ORTHO05D008841 2.2e-27 127.5 146 45.9
Oeu031231.1 Olea europaea HOM05D007072 ORTHO05D008841 2.2e-27 127.5 140 46.4
Hund12130 Selenicereus undatus HOM05D007072 ORTHO05D008841 2.2e-27 127.5 139 45.3
Aqoxy5G00468 Aquilegia oxysepala HOM05D007072 ORTHO05D008841 2.9e-27 127.1 119 51.3
Hma1.2p1_1344F.1_g277130 Hydrangea macrophylla HOM05D007072 ORTHO05D008841 2.9e-27 127.1 148 43.9
MD16G1193700 Malus domestica HOM05D007072 ORTHO05D008841 2.9e-27 127.1 142 46.5
ECA240G2950 Erigeron canadensis HOM05D007072 ORTHO05D008841 3.7e-27 126.7 142 45.8
Gohir.A10G168700 Gossypium hirsutum HOM05D007072 ORTHO05D008841 3.7e-27 126.7 140 47.1
Nn4g26321 Nelumbo nucifera HOM05D007072 ORTHO05D008841 3.7e-27 126.7 131 47.3
Potri.008G152800 Populus trichocarpa HOM05D007072 ORTHO05D008841 3.7e-27 126.7 132 46.2
arahy.Tifrunner.gnm1.ann1.8ZA7N6 Arachis hypogaea HOM05D007072 ORTHO05D008841 4.9e-27 126.3 123 48.8
C05p03740 Brassica napus HOM05D007072 ORTHO05D008841 4.9e-27 126.3 133 45.9
BolC5t29149H Brassica oleracea HOM05D007072 ORTHO05D008841 4.9e-27 126.3 133 45.9
SGA_v2.0_scaffold124G33503 Striga asiatica HOM05D007072 ORTHO05D008841 4.9e-27 126.3 132 46.2
ATR0733G024 Amborella trichopoda HOM05D007072 ORTHO05D008841 6.4e-27 125.9 129 47.3
arahy.Tifrunner.gnm1.ann1.KKZ0LN Arachis hypogaea HOM05D007072 ORTHO05D008841 6.4e-27 125.9 126 48.4
Carub.0001s0473 Capsella rubella HOM05D007072 ORTHO05D008841 6.4e-27 125.9 137 46.0
Haze_00902 Corylus avellana HOM05D007072 ORTHO05D008841 6.4e-27 125.9 143 45.5
Sed0002009 Sechium edule HOM05D007072 ORTHO05D008841 6.4e-27 125.9 129 48.1
PGSC0003DMG400030078 Solanum tuberosum HOM05D007072 ORTHO05D008841 6.4e-27 125.9 147 42.9
EL10Ac4g08230 Beta vulgaris HOM05D007072 ORTHO05D008841 8.3e-27 125.6 146 45.2
BraA10t42680Z Brassica rapa HOM05D007072 ORTHO05D008841 8.3e-27 125.6 133 45.9
AUR62034750 Chenopodium quinoa HOM05D007072 ORTHO05D008841 8.3e-27 125.6 139 46.0
Gorai.011G195700 Gossypium raimondii HOM05D007072 ORTHO05D008841 8.3e-27 125.6 140 46.4
Sp1g04270 Schrenkiella parvula HOM05D007072 ORTHO05D008841 8.3e-27 125.6 117 50.4
Ciclev10005922m.g Citrus clementina HOM05D007072 ORTHO05D008841 1.1e-26 125.2 144 46.5
PSO732G0121 Papaver somniferum HOM05D007072 ORTHO05D008841 1.1e-26 125.2 119 50.4
Solyc09g076030.4 Solanum lycopersicum HOM05D007072 ORTHO05D008841 1.1e-26 125.2 138 44.2
Thecc.04G231900 Theobroma cacao HOM05D007072 ORTHO05D008841 1.1e-26 125.2 140 44.3
BcaB02g06864 Brassica carinata HOM05D007072 ORTHO05D008841 1.4e-26 124.8 117 50.4
ClCG06G006220 Citrullus lanatus HOM05D007072 ORTHO05D008841 1.4e-26 124.8 144 45.8
TAR636G0958 Trochodendron aralioides HOM05D007072 ORTHO05D008841 1.4e-26 124.8 129 48.1
Aa31LG1G19230 Aethionema arabicum HOM05D007072 ORTHO05D008841 1.9e-26 124.4 132 47.0
arahy.Tifrunner.gnm1.ann1.0J3LZT Arachis hypogaea HOM05D007072 ORTHO05D008841 1.9e-26 124.4 126 47.6
Duzib212G0309 Durio zibethinus HOM05D007072 ORTHO05D008841 2.4e-26 124.0 140 43.6
Thhalv10008840m.g Eutrema salsugineum HOM05D007072 ORTHO05D008841 2.4e-26 124.0 134 45.5
AL1G15220 Arabidopsis lyrata HOM05D007072 ORTHO05D008841 3.2e-26 123.6 128 45.3
Cc03_g03760 Coffea canephora HOM05D007072 ORTHO05D008841 3.2e-26 123.6 143 44.1
Gohir.D10G174900 Gossypium hirsutum HOM05D007072 ORTHO05D008841 3.2e-26 123.6 140 46.4
RcHm_v2.0_Chr4g0416241 Rosa chinensis HOM05D007072 ORTHO05D008841 3.2e-26 123.6 142 45.8
Sopen09g030860 Solanum pennellii HOM05D007072 ORTHO05D008841 3.2e-26 123.6 138 43.5
AT1G05385 Arabidopsis thaliana HOM05D007072 ORTHO05D008841 4.1e-26 123.2 136 44.9
Ca_10901_v3 Cicer arietinum L. HOM05D007072 ORTHO05D008841 4.1e-26 123.2 133 47.4
PGR142G1968 Punica granatum HOM05D007072 ORTHO05D008841 4.1e-26 123.2 143 44.1
Atru.ctg752_3.79 Acer truncatum HOM05D007072 ORTHO05D008841 5.4e-26 122.9 143 43.4
CARHR004900 Cardamine hirsuta HOM05D007072 ORTHO05D008841 5.4e-26 122.9 135 43.7
Psat6g207520 Pisum sativum HOM05D007072 ORTHO05D008841 5.4e-26 122.9 129 46.5
Rhsim04G0202300 Rhododendron simsii HOM05D007072 ORTHO05D008841 5.4e-26 122.9 118 46.6
A10p04090 Brassica napus HOM05D007072 ORTHO05D008841 7.0e-26 122.5 133 45.1
Lsat_1_v5_gn_7_66201 Lactuca sativa HOM05D007072 ORTHO05D008841 7.0e-26 122.5 138 45.7
FAN22G0737 Fragaria x ananassa HOM05D007072 ORTHO05D008841 9.2e-26 122.1 125 46.4
SalBow2G0955 Salvia bowleyana HOM05D007072 ORTHO05D008841 1.2e-25 121.7 130 49.2
Medtr1g103810 Medicago truncatula HOM05D007072 ORTHO05D008841 1.6e-25 121.3 133 46.6
Lalb_Chr02g0140581 Lupinus albus HOM05D007072 ORTHO05D008841 2.0e-25 120.9 134 45.5
GSVIVG01017974001 Vitis vinifera HOM05D007072 ORTHO05D008841 2.0e-25 120.9 142 44.4
Actinidia40146 Actinidia chinensis HOM05D007072 ORTHO05D008841 2.7e-25 120.6 117 48.7
Nitab4.5_0000043g0120 Nicotiana tabacum HOM05D007072 ORTHO05D008841 2.7e-25 120.6 137 43.1
Glyma.08G203200 Glycine max HOM05D007072 ORTHO05D008841 3.5e-25 120.2 155 45.2
VMungo0720G2696 Vigna mungo HOM05D007072 ORTHO05D008841 6.0e-25 119.4 156 43.6
Zm00001eb214960 Zea mays HOM05D007072 ORTHO05D008841 6.0e-25 119.4 145 44.8
TPR.G5523 Trifolium pratense HOM05D007072 ORTHO05D008841 7.8e-25 119.0 129 45.7
Glyma.07G018200 Glycine max HOM05D007072 ORTHO05D008841 1.0e-24 118.6 156 43.6
Phvul.007G057300 Phaseolus vulgaris HOM05D007072 ORTHO05D008841 1.0e-24 118.6 152 43.4
TWI09G0189 Tripterygium wilfordii HOM05D007072 ORTHO05D008841 1.3e-24 118.2 147 44.2
Lj3A735T48 Lonicera japonica HOM05D007072 ORTHO05D008841 2.3e-24 117.5 142 44.4
Lj5g0010864 Lotus japonicus HOM05D007072 ORTHO05D008841 3.0e-24 117.1 157 42.7
FvH4_4g15520 Fragaria vesca HOM05D007072 ORTHO05D008841 3.9e-24 116.7 148 42.6
FAN12G0870 Fragaria x ananassa HOM05D007072 ORTHO05D008841 3.9e-24 116.7 148 42.6
Rhsim04G0202400 Rhododendron simsii HOM05D007072 ORTHO05D008841 3.9e-24 116.7 141 41.8
Migut.G00337 Erythranthe guttata HOM05D007072 ORTHO05D008841 6.6e-24 115.9 170 42.4
FAN07G0953 Fragaria x ananassa HOM05D007072 ORTHO05D008841 6.6e-24 115.9 148 41.9
SMO347G0486 Selaginella moellendorffii HOM05D007072 ORTHO05D008841 1.1e-23 115.2 136 41.9
arahy.Tifrunner.gnm1.ann1.DZ7G8Z Arachis hypogaea HOM05D007072 ORTHO05D008841 1.5e-23 114.8 147 41.5
HPP92_001955 Vanilla planifolia HOM05D007072 ORTHO05D008841 1.5e-23 114.8 119 47.9
Os03g0747700 Oryza sativa ssp. japonica HOM05D007072 ORTHO05D008841 5.6e-23 112.8 142 44.4
Sabra08G0116400 Salix brachista HOM05D007072 ORTHO05D008841 1.2e-22 111.7 161 37.9
CDE10G0502 Ceratophyllum demersum HOM05D007072 ORTHO05D008841 8.3e-19 99.0 101 43.6
Actinidia27161 Actinidia chinensis HOM05D007072 ORTHO05D008841 1.6e-17 94.7 125 42.4
AagrBONN_evm.TU.Sc2ySwM_228.1232 Anthoceros agrestis HOM05D007072 ORTHO05D008841 7.8e-17 92.4 100 55.0
Nitab4.5_0001560g0030 Nicotiana tabacum HOM05D007072 ORTHO05D008841 1.5e-15 88.2 68 60.3
SEGI_01006 Sequoiadendron giganteum HOM05D007072 ORTHO05D008841 3.3e-15 87.0 91 49.5
MBI05_g43294_MAGBIO Magnolia biondii HOM05D007072 ORTHO05D008841 1.0e-08 65.5 70 44.3
RcHm_v2.0_Chr4g0430981 Rosa chinensis HOM05D007072 ORTHO05D008841 3.0e-08 63.9 86 45.3
Cre02.g073850 Chlamydomonas reinhardtii HOM05D007072 ORTHO05D008841 7.3e-07 59.3 105 32.4
MCO04G154 Micromonas commoda HOM05D007072 ORTHO05D008841 1.2e-06 58.5 100 33.0


User provided reference genes

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