Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g415 Chara braunii HOM05D006681 ORTHO05D008338 1.8e-207 725.7 365 100.0
Aqoxy4G03072 Aquilegia oxysepala HOM05D006681 ORTHO05D008338 3.7e-72 276.2 346 43.4
Eucgr.J02098 Eucalyptus grandis HOM05D006681 ORTHO05D008338 4.5e-70 269.2 360 41.1
HPP92_006593 Vanilla planifolia HOM05D006681 ORTHO05D008338 4.5e-70 269.2 361 40.4
THA.LOC104814870 Tarenaya hassleriana HOM05D006681 ORTHO05D008338 5.0e-69 265.8 353 43.1
TAR633G1649 Trochodendron aralioides HOM05D006681 ORTHO05D008338 5.0e-69 265.8 352 42.3
Sed0010670 Sechium edule HOM05D006681 ORTHO05D008338 6.5e-69 265.4 347 42.9
Zm00001eb266060 Zea mays HOM05D006681 ORTHO05D008338 1.1e-68 264.6 356 40.2
Nn2g10531 Nelumbo nucifera HOM05D006681 ORTHO05D008338 1.5e-68 264.2 349 41.0
Os05g0117500 Oryza sativa ssp. japonica HOM05D006681 ORTHO05D008338 4.2e-68 262.7 350 41.4
AagrBONN_evm.TU.Sc2ySwM_228.1772 Anthoceros agrestis HOM05D006681 ORTHO05D008338 9.4e-68 261.5 337 43.3
Ciclev10028948m.g Citrus clementina HOM05D006681 ORTHO05D008338 9.4e-68 261.5 352 41.5
Pp3c11_23040 Physcomitrium patens HOM05D006681 ORTHO05D008338 9.4e-68 261.5 342 41.8
Atru.chr3.3798 Acer truncatum HOM05D006681 ORTHO05D008338 1.2e-67 261.2 344 39.8
Thhalv10002615m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 1.2e-67 261.2 347 42.7
CiPaw.13G101600 Carya illinoinensis HOM05D006681 ORTHO05D008338 1.6e-67 260.8 351 41.0
Cc01_g12140 Coffea canephora HOM05D006681 ORTHO05D008338 4.7e-67 259.2 348 40.8
GSVIVG01025054001 Vitis vinifera HOM05D006681 ORTHO05D008338 6.1e-67 258.8 353 39.7
HanXRQChr05g0134071 Helianthus annuus HOM05D006681 ORTHO05D008338 8.0e-67 258.5 345 41.4
Potri.009G026700 Populus trichocarpa HOM05D006681 ORTHO05D008338 1.8e-66 257.3 343 40.5
ECA236G1321 Erigeron canadensis HOM05D006681 ORTHO05D008338 6.7e-66 255.4 344 40.1
CANSAT54G2145 Cannabis sativa HOM05D006681 ORTHO05D008338 8.8e-66 255.0 352 41.5
Lsat_1_v5_gn_8_78740 Lactuca sativa HOM05D006681 ORTHO05D008338 1.1e-65 254.6 344 40.7
Sabra09G0017800 Salix brachista HOM05D006681 ORTHO05D008338 1.1e-65 254.6 344 39.2
TWI31G0387 Tripterygium wilfordii HOM05D006681 ORTHO05D008338 1.5e-65 254.2 347 39.5
PGR119G1802 Punica granatum HOM05D006681 ORTHO05D008338 4.4e-65 252.7 361 40.2
Cfa011429 Carpinus fangiana HOM05D006681 ORTHO05D008338 5.7e-65 252.3 337 41.5
SMO367G0798 Selaginella moellendorffii HOM05D006681 ORTHO05D008338 5.7e-65 252.3 338 41.4
arahy.Tifrunner.gnm1.ann1.SK7GFS Arachis hypogaea HOM05D006681 ORTHO05D008338 9.7e-65 251.5 351 39.6
MBI14_g35939_MAGBIO Magnolia biondii HOM05D006681 ORTHO05D008338 9.7e-65 251.5 352 40.6
RcHm_v2.0_Chr5g0062361 Rosa chinensis HOM05D006681 ORTHO05D008338 9.7e-65 251.5 353 39.4
Thecc.09G329700 Theobroma cacao HOM05D006681 ORTHO05D008338 2.2e-64 250.4 344 41.6
BraA06t25188Z Brassica rapa HOM05D006681 ORTHO05D008338 2.8e-64 250.0 341 41.1
COL.COLO4_18427 Corchorus olitorius HOM05D006681 ORTHO05D008338 3.7e-64 249.6 344 40.4
AL5G24960 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 4.8e-64 249.2 341 41.3
BcaC01g01926 Brassica carinata HOM05D006681 ORTHO05D008338 4.8e-64 249.2 341 40.5
FAN16G0358 Fragaria x ananassa HOM05D006681 ORTHO05D008338 4.8e-64 249.2 341 39.3
A06p21000 Brassica napus HOM05D006681 ORTHO05D008338 6.3e-64 248.8 341 41.1
C03p70520 Brassica napus HOM05D006681 ORTHO05D008338 6.3e-64 248.8 341 40.8
BolC3t19336H Brassica oleracea HOM05D006681 ORTHO05D008338 6.3e-64 248.8 341 40.8
Lalb_Chr03g0026931 Lupinus albus HOM05D006681 ORTHO05D008338 6.3e-64 248.8 346 40.8
Prupe.6G086900 Prunus persica HOM05D006681 ORTHO05D008338 6.3e-64 248.8 353 39.9
QL01p034239 Quercus lobata HOM05D006681 ORTHO05D008338 6.3e-64 248.8 340 41.2
CSS0025304 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 8.2e-64 248.4 341 40.8
CSS0007914 Camellia sinensis var. sinensis HOM05D006681 ORTHO05D008338 1.1e-63 248.1 341 39.9
FAN11G3596 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.1e-63 248.1 343 39.7
FvH4_3g34680 Fragaria vesca HOM05D006681 ORTHO05D008338 1.4e-63 247.7 343 39.7
Carub.0005s1203 Capsella rubella HOM05D006681 ORTHO05D008338 1.8e-63 247.3 349 41.0
CsaV3_6G022080 Cucumis sativus L. HOM05D006681 ORTHO05D008338 1.8e-63 247.3 338 41.1
arahy.Tifrunner.gnm1.ann1.FZI6FG Arachis hypogaea HOM05D006681 ORTHO05D008338 2.4e-63 246.9 347 39.2
Mapoly0128s0008 Marchantia polymorpha HOM05D006681 ORTHO05D008338 2.4e-63 246.9 340 42.4
PSO339G5789 Papaver somniferum HOM05D006681 ORTHO05D008338 3.1e-63 246.5 340 40.9
AT3G46200 Arabidopsis thaliana HOM05D006681 ORTHO05D008338 4.1e-63 246.1 351 39.9
Gorai.009G102400 Gossypium raimondii HOM05D006681 ORTHO05D008338 4.1e-63 246.1 342 40.4
Gohir.A05G098700 Gossypium hirsutum HOM05D006681 ORTHO05D008338 5.3e-63 245.7 342 40.1
Gohir.D05G098750 Gossypium hirsutum HOM05D006681 ORTHO05D008338 9.1e-63 245.0 342 40.4
Lj3g0002575 Lotus japonicus HOM05D006681 ORTHO05D008338 9.1e-63 245.0 346 41.0
Migut.D02146 Erythranthe guttata HOM05D006681 ORTHO05D008338 1.2e-62 244.6 342 40.1
TPR.G3006 Trifolium pratense HOM05D006681 ORTHO05D008338 1.2e-62 244.6 350 41.1
Sopen11g030630 Solanum pennellii HOM05D006681 ORTHO05D008338 1.6e-62 244.2 338 39.9
PSO384G0101 Papaver somniferum HOM05D006681 ORTHO05D008338 2.0e-62 243.8 340 40.9
Peaxi162Scf00411g00068 Petunia axillaris HOM05D006681 ORTHO05D008338 3.5e-62 243.0 338 39.6
Ca_19209_v3 Cicer arietinum L. HOM05D006681 ORTHO05D008338 7.7e-62 241.9 346 40.5
Duzib170G0311 Durio zibethinus HOM05D006681 ORTHO05D008338 7.7e-62 241.9 341 39.9
Phvul.011G069100 Phaseolus vulgaris HOM05D006681 ORTHO05D008338 1.0e-61 241.5 346 40.2
Solyc11g072970.2 Solanum lycopersicum HOM05D006681 ORTHO05D008338 1.0e-61 241.5 338 39.6
EL10Ac7g15941 Beta vulgaris HOM05D006681 ORTHO05D008338 1.3e-61 241.1 341 40.2
PGSC0003DMG400015551 Solanum tuberosum HOM05D006681 ORTHO05D008338 2.2e-61 240.4 338 39.6
MD11G1116600 Malus domestica HOM05D006681 ORTHO05D008338 2.9e-61 240.0 341 39.0
Carub.0003s2829 Capsella rubella HOM05D006681 ORTHO05D008338 5.0e-61 239.2 349 40.1
CAN.G1647.1 Capsicum annuum HOM05D006681 ORTHO05D008338 5.0e-61 239.2 338 38.8
DCAR_006014 Daucus carota HOM05D006681 ORTHO05D008338 1.1e-60 238.0 349 38.1
Oeu040277.1 Olea europaea HOM05D006681 ORTHO05D008338 1.1e-60 238.0 342 40.6
Psat7g220640 Pisum sativum HOM05D006681 ORTHO05D008338 1.5e-60 237.7 346 39.6
MSTRG.18607 Avicennia marina HOM05D006681 ORTHO05D008338 4.2e-60 236.1 342 40.1
Medtr4g062130 Medicago truncatula HOM05D006681 ORTHO05D008338 4.2e-60 236.1 355 40.3
FAN21G0481 Fragaria x ananassa HOM05D006681 ORTHO05D008338 1.6e-59 234.2 376 36.7
VMungo1127G1059 Vigna mungo HOM05D006681 ORTHO05D008338 1.6e-59 234.2 330 39.7
Sp5g15430 Schrenkiella parvula HOM05D006681 ORTHO05D008338 3.6e-59 233.0 341 40.5
SalBow3G4078 Salvia bowleyana HOM05D006681 ORTHO05D008338 1.4e-58 231.1 342 38.6
AUR62001852 Chenopodium quinoa HOM05D006681 ORTHO05D008338 1.2e-57 228.0 340 40.3
SGA_v2.0_scaffold134G34764 Striga asiatica HOM05D006681 ORTHO05D008338 1.5e-57 227.6 327 40.1
ClCG02G020630 Citrullus lanatus HOM05D006681 ORTHO05D008338 2.0e-57 227.3 397 35.5
Aa31LG4G15300 Aethionema arabicum HOM05D006681 ORTHO05D008338 2.6e-57 226.9 378 37.0
Glyma.12G075000 Glycine max HOM05D006681 ORTHO05D008338 2.6e-57 226.9 346 38.2
Rhsim13G0088300 Rhododendron simsii HOM05D006681 ORTHO05D008338 4.8e-56 222.6 344 38.4
Manes.11G136100 Manihot esculenta HOM05D006681 ORTHO05D008338 5.9e-54 215.7 344 37.5
Ah.08g214980 Amaranthus hybridus HOM05D006681 ORTHO05D008338 3.8e-53 213.0 341 35.8
Nitab4.5_0002684g0160 Nicotiana tabacum HOM05D006681 ORTHO05D008338 7.2e-52 208.8 343 37.6
Thhalv10002633m.g Eutrema salsugineum HOM05D006681 ORTHO05D008338 6.1e-51 205.7 305 40.0
Lj1A175T11 Lonicera japonica HOM05D006681 ORTHO05D008338 2.3e-50 203.8 344 35.2
FAN25G3219 Fragaria x ananassa HOM05D006681 ORTHO05D008338 7.5e-49 198.7 342 36.3
vmacro03125 Vaccinium macrocarpon HOM05D006681 ORTHO05D008338 4.1e-47 193.0 348 35.6
Nitab4.5_0002684g0190 Nicotiana tabacum HOM05D006681 ORTHO05D008338 1.6e-46 191.0 312 37.2
Cpa.g.sc2126.1 Carica papaya HOM05D006681 ORTHO05D008338 6.6e-45 185.7 268 37.7
MELO3C013668.2 Cucumis melo HOM05D006681 ORTHO05D008338 8.6e-45 185.3 315 36.8
Lj3g0011020 Lotus japonicus HOM05D006681 ORTHO05D008338 8.6e-45 185.3 250 41.6
Dinv32860 Davidia involucrata HOM05D006681 ORTHO05D008338 5.6e-44 182.6 278 37.4
AUR62009646 Chenopodium quinoa HOM05D006681 ORTHO05D008338 6.1e-43 179.1 340 33.8
Duzib168G1095 Durio zibethinus HOM05D006681 ORTHO05D008338 9.8e-41 171.8 260 38.8
Pp3c11_23047 Physcomitrium patens HOM05D006681 ORTHO05D008338 1.4e-39 167.9 207 42.5
Nitab4.5_0001953g0020 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.0e-38 164.1 238 39.1
ATR0759G055 Amborella trichopoda HOM05D006681 ORTHO05D008338 3.5e-38 163.3 186 45.7
Sc06g0008190 Simmondsia chinensis HOM05D006681 ORTHO05D008338 3.5e-38 163.3 227 40.1
Hund05017 Selenicereus undatus HOM05D006681 ORTHO05D008338 3.0e-37 160.2 345 32.8
Haze_24007 Corylus avellana HOM05D006681 ORTHO05D008338 4.0e-34 149.8 436 30.7
SEGI_27570 Sequoiadendron giganteum HOM05D006681 ORTHO05D008338 5.2e-34 149.4 214 42.5
AL1G56400 Arabidopsis lyrata HOM05D006681 ORTHO05D008338 6.8e-34 149.1 245 37.1
PRCOL_00001211 Prasinoderma coloniale HOM05D006681 ORTHO05D008338 5.8e-25 119.4 453 26.3
Nitab4.5_0001953g0050 Nicotiana tabacum HOM05D006681 ORTHO05D008338 2.7e-22 110.5 337 26.1
MCO11G760 Micromonas commoda HOM05D006681 ORTHO05D008338 2.8e-19 100.5 300 27.3
Sc06g0008200 Simmondsia chinensis HOM05D006681 ORTHO05D008338 1.4e-18 98.2 120 40.8
Glyma.11G145018 Glycine max HOM05D006681 ORTHO05D008338 7.1e-15 85.9 130 39.2
Nitab4.5_0000766g0030 Nicotiana tabacum HOM05D006681 ORTHO05D008338 6.0e-14 82.8 86 48.8
CAN.G1289.2 Capsicum annuum HOM05D006681 ORTHO05D008338 8.9e-10 68.9 141 33.3
MD03G1102800 Malus domestica HOM05D006681 ORTHO05D008338 1.2e-09 68.6 66 50.0
CDE08G1356 Ceratophyllum demersum HOM05D006681 ORTHO05D008338 1.1e-07 62.0 67 44.8
Actinidia20468 Actinidia chinensis HOM05D006681 ORTHO05D008338 1.9e-07 61.2 66 43.9


User provided reference genes

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