Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g41406 Chara braunii HOM05D005994 ORTHO05D007322 7.4e-52 206.8 98 100.0
Mapoly0008s0024 Marchantia polymorpha HOM05D005994 ORTHO05D007322 1.8e-34 149.1 98 70.4
Pp3c6_28950 Physcomitrium patens HOM05D005994 ORTHO05D007322 2.0e-33 145.6 98 66.3
AagrBONN_evm.TU.Sc2ySwM_117.3129 Anthoceros agrestis HOM05D005994 ORTHO05D007322 1.8e-26 122.5 94 58.5
AagrBONN_evm.TU.Sc2ySwM_368.698 Anthoceros agrestis HOM05D005994 ORTHO05D007322 1.8e-26 122.5 96 57.3
PSO832G1566 Papaver somniferum HOM05D005994 ORTHO05D007322 1.0e-24 116.7 90 57.8
MBI04_g07210_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 1.7e-24 115.9 91 58.2
PSO063G2191 Papaver somniferum HOM05D005994 ORTHO05D007322 1.7e-24 115.9 90 57.8
SEGI_29999 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 3.8e-24 114.8 96 54.2
ATR0564G257 Amborella trichopoda HOM05D005994 ORTHO05D007322 6.5e-24 114.0 92 56.5
Aqoxy4G02214 Aquilegia oxysepala HOM05D005994 ORTHO05D007322 6.5e-24 114.0 90 57.8
CSS0045306 Camellia sinensis var. sinensis HOM05D005994 ORTHO05D007322 8.5e-24 113.6 90 58.9
CDE12G0176 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 8.5e-24 113.6 90 56.7
Oeu005968.1 Olea europaea HOM05D005994 ORTHO05D007322 8.5e-24 113.6 90 57.8
vmacro11561 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 1.1e-23 113.2 90 57.8
Actinidia00094 Actinidia chinensis HOM05D005994 ORTHO05D007322 1.5e-23 112.8 90 57.8
Actinidia05033 Actinidia chinensis HOM05D005994 ORTHO05D007322 1.9e-23 112.5 90 57.8
CAN.G337.28 Capsicum annuum HOM05D005994 ORTHO05D007322 1.9e-23 112.5 91 57.1
Oeu005493.1 Olea europaea HOM05D005994 ORTHO05D007322 1.9e-23 112.5 90 58.9
Rhsim06G0226700 Rhododendron simsii HOM05D005994 ORTHO05D007322 1.9e-23 112.5 90 57.8
PGSC0003DMG400022186 Solanum tuberosum HOM05D005994 ORTHO05D007322 1.9e-23 112.5 91 57.1
MSTRG.14470 Avicennia marina HOM05D005994 ORTHO05D007322 2.5e-23 112.1 90 58.9
Nitab4.5_0000461g0100 Nicotiana tabacum HOM05D005994 ORTHO05D007322 2.5e-23 112.1 91 57.1
Sopen07g033490 Solanum pennellii HOM05D005994 ORTHO05D007322 2.5e-23 112.1 91 58.2
HPP92_013264 Vanilla planifolia HOM05D005994 ORTHO05D007322 3.2e-23 111.7 85 61.2
CDE01G0018 Ceratophyllum demersum HOM05D005994 ORTHO05D007322 4.2e-23 111.3 90 55.6
CBR_g50091 Chara braunii HOM05D005994 ORTHO05D007322 4.2e-23 111.3 55 94.5
Nitab4.5_0000163g0320 Nicotiana tabacum HOM05D005994 ORTHO05D007322 4.2e-23 111.3 90 57.8
Nitab4.5_0001750g0060 Nicotiana tabacum HOM05D005994 ORTHO05D007322 4.2e-23 111.3 90 57.8
vmacro09668 Vaccinium macrocarpon HOM05D005994 ORTHO05D007322 5.5e-23 110.9 90 55.6
Peaxi162Scf00955g00216 Petunia axillaris HOM05D005994 ORTHO05D007322 9.4e-23 110.2 90 55.6
Sed0000308 Sechium edule HOM05D005994 ORTHO05D007322 9.4e-23 110.2 90 56.7
GSVIVG01037779001 Vitis vinifera HOM05D005994 ORTHO05D007322 9.4e-23 110.2 91 54.9
MSTRG.13010 Avicennia marina HOM05D005994 ORTHO05D007322 1.2e-22 109.8 90 56.7
BcaC06g33480 Brassica carinata HOM05D005994 ORTHO05D007322 1.2e-22 109.8 92 54.3
Sabra06G0011700 Salix brachista HOM05D005994 ORTHO05D007322 1.2e-22 109.8 90 56.7
SGA_v2.0_scaffold168G38531 Striga asiatica HOM05D005994 ORTHO05D007322 1.2e-22 109.8 90 56.7
DCAR_013214 Daucus carota HOM05D005994 ORTHO05D007322 1.6e-22 109.4 90 54.4
Glyma.09G011900 Glycine max HOM05D005994 ORTHO05D007322 2.1e-22 109.0 89 56.2
Glyma.15G116500 Glycine max HOM05D005994 ORTHO05D007322 2.1e-22 109.0 89 56.2
Sp7g15010 Schrenkiella parvula HOM05D005994 ORTHO05D007322 2.1e-22 109.0 92 54.3
Solyc07g065275.1 Solanum lycopersicum HOM05D005994 ORTHO05D007322 2.1e-22 109.0 86 58.1
Thecc.06G236600 Theobroma cacao HOM05D005994 ORTHO05D007322 2.1e-22 109.0 90 57.8
VMungo0540G2179 Vigna mungo HOM05D005994 ORTHO05D007322 2.1e-22 109.0 89 55.1
ClCG01G010630 Citrullus lanatus HOM05D005994 ORTHO05D007322 2.7e-22 108.6 90 56.7
Duzib235G0800 Durio zibethinus HOM05D005994 ORTHO05D007322 2.7e-22 108.6 90 55.6
HanXRQChr08g0213481 Helianthus annuus HOM05D005994 ORTHO05D007322 2.7e-22 108.6 90 55.6
PGR004G2260 Punica granatum HOM05D005994 ORTHO05D007322 2.7e-22 108.6 90 55.6
Ah.06g181210 Amaranthus hybridus HOM05D005994 ORTHO05D007322 3.6e-22 108.2 90 55.6
EL10Ac4g07614 Beta vulgaris HOM05D005994 ORTHO05D007322 3.6e-22 108.2 90 54.4
CARHR222840 Cardamine hirsuta HOM05D005994 ORTHO05D007322 3.6e-22 108.2 92 53.3
ECA246G1213 Erigeron canadensis HOM05D005994 ORTHO05D007322 3.6e-22 108.2 90 54.4
Migut.M01676 Erythranthe guttata HOM05D005994 ORTHO05D007322 3.6e-22 108.2 90 55.6
Potri.006G016300 Populus trichocarpa HOM05D005994 ORTHO05D007322 3.6e-22 108.2 90 56.7
Sed0000190 Sechium edule HOM05D005994 ORTHO05D007322 3.6e-22 108.2 90 55.6
THA.LOC104810390 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 3.6e-22 108.2 94 54.3
Cc05_g14690 Coffea canephora HOM05D005994 ORTHO05D007322 4.7e-22 107.8 90 55.6
Phvul.006G141600 Phaseolus vulgaris HOM05D005994 ORTHO05D007322 4.7e-22 107.8 88 55.7
unitig_747.g21642 Utricularia gibba HOM05D005994 ORTHO05D007322 4.7e-22 107.8 90 56.7
MELO3C025540.2 Cucumis melo HOM05D005994 ORTHO05D007322 6.1e-22 107.5 90 55.6
Lj6g0002817 Lotus japonicus HOM05D005994 ORTHO05D007322 6.1e-22 107.5 88 56.8
Sabra16G0013400 Salix brachista HOM05D005994 ORTHO05D007322 6.1e-22 107.5 86 58.1
Sc03g0008000 Simmondsia chinensis HOM05D005994 ORTHO05D007322 6.1e-22 107.5 89 56.2
TWI63G1647 Tripterygium wilfordii HOM05D005994 ORTHO05D007322 6.1e-22 107.5 90 54.4
CiPaw.10G079600 Carya illinoinensis HOM05D005994 ORTHO05D007322 8.0e-22 107.1 86 57.0
Duzib192G0253 Durio zibethinus HOM05D005994 ORTHO05D007322 8.0e-22 107.1 92 54.3
Gorai.010G249300 Gossypium raimondii HOM05D005994 ORTHO05D007322 8.0e-22 107.1 90 55.6
BcaNung00192 Brassica carinata HOM05D005994 ORTHO05D007322 1.0e-21 106.7 92 53.3
A01p21090 Brassica napus HOM05D005994 ORTHO05D007322 1.0e-21 106.7 92 53.3
C01p26360 Brassica napus HOM05D005994 ORTHO05D007322 1.0e-21 106.7 92 53.3
AUR62017059 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.0e-21 106.7 90 53.3
AUR62040659 Chenopodium quinoa HOM05D005994 ORTHO05D007322 1.0e-21 106.7 90 53.3
Lalb_Chr03g0035721 Lupinus albus HOM05D005994 ORTHO05D007322 1.0e-21 106.7 90 55.6
Manes.09G081660 Manihot esculenta HOM05D005994 ORTHO05D007322 1.0e-21 106.7 90 56.7
Potri.016G009600 Populus trichocarpa HOM05D005994 ORTHO05D007322 1.0e-21 106.7 90 56.7
arahy.Tifrunner.gnm1.ann1.CR688Y Arachis hypogaea HOM05D005994 ORTHO05D007322 1.4e-21 106.3 90 54.4
arahy.Tifrunner.gnm1.ann1.R43TP7 Arachis hypogaea HOM05D005994 ORTHO05D007322 1.4e-21 106.3 90 54.4
A03p49850 Brassica napus HOM05D005994 ORTHO05D007322 1.4e-21 106.3 88 55.7
C07p47910 Brassica napus HOM05D005994 ORTHO05D007322 1.4e-21 106.3 88 55.7
BolC7t45314H Brassica oleracea HOM05D005994 ORTHO05D007322 1.4e-21 106.3 88 55.7
BraA03t14080Z Brassica rapa HOM05D005994 ORTHO05D007322 1.4e-21 106.3 88 55.7
Hund23128 Selenicereus undatus HOM05D005994 ORTHO05D007322 1.4e-21 106.3 90 54.4
SEGI_25373 Sequoiadendron giganteum HOM05D005994 ORTHO05D007322 1.4e-21 106.3 79 63.3
Haze_06972 Corylus avellana HOM05D005994 ORTHO05D007322 1.8e-21 105.9 90 52.2
Thhalv10026636m.g Eutrema salsugineum HOM05D005994 ORTHO05D007322 1.8e-21 105.9 92 52.2
Zm00001eb179550 Zea mays HOM05D005994 ORTHO05D007322 1.8e-21 105.9 91 51.6
AL7G38530 Arabidopsis lyrata HOM05D005994 ORTHO05D007322 2.3e-21 105.5 92 52.2
Carub.0007s2505 Capsella rubella HOM05D005994 ORTHO05D007322 2.3e-21 105.5 92 52.2
Gohir.D06G216900 Gossypium hirsutum HOM05D005994 ORTHO05D007322 2.3e-21 105.5 90 54.4
CANSAT56G3985 Cannabis sativa HOM05D005994 ORTHO05D007322 3.0e-21 105.1 89 53.9
Gohir.A06G204600 Gossypium hirsutum HOM05D005994 ORTHO05D007322 3.0e-21 105.1 90 54.4
Lsat_1_v5_gn_5_8041 Lactuca sativa HOM05D000063 ORTHO05D000906 3.0e-21 105.1 88 54.5
QL05p068624 Quercus lobata HOM05D005994 ORTHO05D007322 3.0e-21 105.1 90 52.2
QL05p068978 Quercus lobata HOM05D005994 ORTHO05D007322 3.0e-21 105.1 90 52.2
Aa31LG2G12530 Aethionema arabicum HOM05D005994 ORTHO05D007322 4.0e-21 104.8 92 52.2
BcaC09g50351 Brassica carinata HOM05D005994 ORTHO05D007322 4.0e-21 104.8 92 52.2
BolC1t02582H Brassica oleracea HOM05D005994 ORTHO05D007322 4.0e-21 104.8 92 52.2
COL.COLO4_07784 Corchorus olitorius HOM05D005994 ORTHO05D007322 4.0e-21 104.8 90 54.4
MD00G1058600 Malus domestica HOM05D005994 ORTHO05D007322 5.2e-21 104.4 90 52.2
Psat1g178480 Pisum sativum HOM05D005994 ORTHO05D007322 5.2e-21 104.4 86 55.8
Ca_00743_v3 Cicer arietinum L. HOM05D005994 ORTHO05D007322 6.7e-21 104.0 88 52.3
CsaV3_1G017030 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.1e-20 103.2 83 57.8
CsaV3_UNG053450 Cucumis sativus L. HOM05D005994 ORTHO05D007322 1.1e-20 103.2 83 57.8
Eucgr.D00619 Eucalyptus grandis HOM05D005994 ORTHO05D007322 1.1e-20 103.2 86 53.5
Lalb_Chr19g0129971 Lupinus albus HOM05D005994 ORTHO05D007322 1.1e-20 103.2 90 52.2
MD10G1336200 Malus domestica HOM05D005994 ORTHO05D007322 1.1e-20 103.2 90 52.2
TPR.G10599 Trifolium pratense HOM05D005994 ORTHO05D007322 1.1e-20 103.2 89 52.8
Medtr2g026500 Medicago truncatula HOM05D005994 ORTHO05D007322 1.5e-20 102.8 89 52.8
Prupe.4G007400 Prunus persica HOM05D005994 ORTHO05D007322 1.5e-20 102.8 89 53.9
Ah.04g166430 Amaranthus hybridus HOM05D000063 ORTHO05D000906 2.0e-20 102.4 85 54.1
AT4G16450 Arabidopsis thaliana HOM05D005994 ORTHO05D007322 2.0e-20 102.4 92 51.1
THA.LOC104815483 Tarenaya hassleriana HOM05D005994 ORTHO05D007322 2.0e-20 102.4 93 52.7
Os08g0431500 Oryza sativa ssp. japonica HOM05D005994 ORTHO05D007322 2.6e-20 102.1 91 49.5
FAN25G0933 Fragaria x ananassa HOM05D005994 ORTHO05D007322 5.7e-20 100.9 90 50.0
RcHm_v2.0_Chr5g0000881 Rosa chinensis HOM05D005994 ORTHO05D007322 5.7e-20 100.9 90 50.0
Cfa000074 Carpinus fangiana HOM05D005994 ORTHO05D007322 9.7e-20 100.1 90 50.0
FAN21G1761 Fragaria x ananassa HOM05D005994 ORTHO05D007322 2.2e-19 99.0 90 48.9
FvH4_3g00660 Fragaria vesca HOM05D005994 ORTHO05D007322 2.8e-19 98.6 85 51.8
MCO11G626 Micromonas commoda HOM05D005994 ORTHO05D007322 1.8e-18 95.9 95 48.4
Ciclev10016738m.g Citrus clementina HOM05D005994 ORTHO05D007322 7.0e-18 94.0 115 43.5
Peaxi162Scf00285g00824 Petunia axillaris HOM05D005994 ORTHO05D007322 5.9e-17 90.9 88 51.1
SMO223G0003 Selaginella moellendorffii HOM05D005994 ORTHO05D007322 2.5e-15 85.5 91 44.0
MBI04_g36325_MAGBIO Magnolia biondii HOM05D005994 ORTHO05D007322 1.6e-14 82.8 92 45.7
Atru.chr1.2350 Acer truncatum HOM05D005994 ORTHO05D007322 2.0e-12 75.9 90 47.8
Cpa.g.sc3096.1 Carica papaya HOM05D005994 ORTHO05D007322 7.7e-09 63.9 58 51.7
HanXRQChr17g0564261 Helianthus annuus HOM05D005994 ORTHO05D007322 1.1e-07 60.1 45 57.8
Nn5g27130 Nelumbo nucifera HOM05D005994 ORTHO05D007322 6.1e-06 54.3 47 51.1


User provided reference genes

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