Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g41354 Chara braunii HOM05D001777 ORTHO05D001809 6.5e-140 500.7 259 100.0
Pp3c20_9210 Physcomitrium patens HOM05D001777 ORTHO05D001809 3.0e-12 76.6 103 42.7
Mapoly0038s0096 Marchantia polymorpha HOM05D001777 ORTHO05D001809 8.9e-12 75.1 94 47.9
AagrBONN_evm.TU.Sc2ySwM_228.2686 Anthoceros agrestis HOM05D001777 ORTHO05D001809 2.2e-10 70.5 95 44.2
Pp3c23_7680 Physcomitrium patens HOM05D001777 ORTHO05D001809 2.2e-10 70.5 97 44.3
ATR0315G136 Amborella trichopoda HOM05D001777 ORTHO05D001809 1.1e-09 68.2 106 38.7
SEGI_37636 Sequoiadendron giganteum HOM05D001777 ORTHO05D001809 1.8e-09 67.4 83 48.2
CANSAT02G0003 Cannabis sativa HOM05D001777 ORTHO05D001809 2.4e-09 67.0 93 45.2
MBI01_g30744_MAGBIO Magnolia biondii HOM05D001777 ORTHO05D001809 2.4e-09 67.0 85 45.9
SEGI_33671 Sequoiadendron giganteum HOM05D001777 ORTHO05D001809 2.4e-09 67.0 102 42.2
MBI04_g19179_MAGBIO Magnolia biondii HOM05D001777 ORTHO05D001809 2.0e-08 63.9 105 39.0
Manes.16G113800 Manihot esculenta HOM05D001777 ORTHO05D001809 2.0e-08 63.9 99 42.4
Cpa.g.sc23.84 Carica papaya HOM05D001777 ORTHO05D001809 2.7e-08 63.5 85 42.4
SMO196G0171 Selaginella moellendorffii HOM05D001777 ORTHO05D001809 5.9e-08 62.4 89 44.9
DCAR_028697 Daucus carota HOM05D001777 ORTHO05D001809 7.8e-08 62.0 98 41.8
Pp3c20_23080 Physcomitrium patens HOM05D001777 ORTHO05D001809 7.8e-08 62.0 103 36.9
CSS0046187 Camellia sinensis var. sinensis HOM05D001777 ORTHO05D001809 1.0e-07 61.6 93 41.9
MD15G1181800 Malus domestica HOM05D001777 ORTHO05D001809 1.3e-07 61.2 85 41.2
Thecc.09G107200 Theobroma cacao HOM05D001777 ORTHO05D001809 1.3e-07 61.2 87 42.5
TWI63G1363 Tripterygium wilfordii HOM05D001777 ORTHO05D001809 1.3e-07 61.2 85 42.4
DCAR_004491 Daucus carota HOM05D001777 ORTHO05D001809 1.7e-07 60.8 79 44.3
Duzib150G0851 Durio zibethinus HOM05D001777 ORTHO05D001809 1.7e-07 60.8 88 42.0
PSO210G3411 Papaver somniferum HOM05D001777 ORTHO05D001809 1.7e-07 60.8 85 41.2
PSO210G6079 Papaver somniferum HOM05D001777 ORTHO05D001809 1.7e-07 60.8 85 41.2
CsaV3_1G045720 Cucumis sativus L. HOM05D001777 ORTHO05D001809 2.3e-07 60.5 91 44.0
Medtr6g087590 Medicago truncatula HOM05D001777 ORTHO05D001809 2.3e-07 60.5 92 39.1
FvH4_1g04340 Fragaria vesca HOM05D001777 ORTHO05D001809 2.9e-07 60.1 85 41.2
FAN19G1104 Fragaria x ananassa HOM05D001777 ORTHO05D001809 2.9e-07 60.1 98 39.8
Gohir.A06G064200 Gossypium hirsutum HOM05D001777 ORTHO05D001809 2.9e-07 60.1 88 42.0
Actinidia09430 Actinidia chinensis HOM05D001777 ORTHO05D001809 3.9e-07 59.7 93 40.9
FAN23G1238 Fragaria x ananassa HOM05D001777 ORTHO05D001809 3.9e-07 59.7 98 39.8
FAN28G2425 Fragaria x ananassa HOM05D001777 ORTHO05D001809 3.9e-07 59.7 98 39.8
Lj7C655T8 Lonicera japonica HOM05D001777 ORTHO05D001809 3.9e-07 59.7 79 44.3
TAR383G0343 Trochodendron aralioides HOM05D001777 ORTHO05D001809 3.9e-07 59.7 82 41.5
Manes.03G023000 Manihot esculenta HOM05D001777 ORTHO05D001809 5.0e-07 59.3 88 43.2
COL.COLO4_34824 Corchorus olitorius HOM05D001777 ORTHO05D001809 6.6e-07 58.9 88 42.0
Gohir.D06G062800 Gossypium hirsutum HOM05D001777 ORTHO05D001809 6.6e-07 58.9 88 40.9
Gorai.010G073200 Gossypium raimondii HOM05D001777 ORTHO05D001809 6.6e-07 58.9 88 40.9
MD02G1043000 Malus domestica HOM05D001777 ORTHO05D001809 6.6e-07 58.9 109 36.7
Psat1g043480 Pisum sativum HOM05D001777 ORTHO05D001809 6.6e-07 58.9 85 42.4
CsaV3_2G002160 Cucumis sativus L. HOM05D001777 ORTHO05D001809 8.6e-07 58.5 93 39.8
Os01g0761100 Oryza sativa ssp. japonica HOM05D001777 ORTHO05D001809 8.6e-07 58.5 96 38.5
Peaxi162Scf00231g00335 Petunia axillaris HOM05D001777 ORTHO05D001809 8.6e-07 58.5 80 41.2
Solyc07g020710.3 Solanum lycopersicum HOM05D001777 ORTHO05D001809 8.6e-07 58.5 88 38.6
Dinv36655 Davidia involucrata HOM05D001777 ORTHO05D001809 1.1e-06 58.2 90 41.1
Gohir.D07G006900 Gossypium hirsutum HOM05D001777 ORTHO05D001809 1.1e-06 58.2 88 40.9
Gorai.001G006500 Gossypium raimondii HOM05D001777 ORTHO05D001809 1.1e-06 58.2 88 40.9
Hund26224 Selenicereus undatus HOM05D001777 ORTHO05D001809 1.1e-06 58.2 94 41.5
ClCG06G008750 Citrullus lanatus HOM05D001777 ORTHO05D001809 1.5e-06 57.8 90 42.2
Cc06_g09920 Coffea canephora HOM05D001777 ORTHO05D001809 1.5e-06 57.8 81 43.2
Eucgr.C01266 Eucalyptus grandis HOM05D001777 ORTHO05D001809 1.5e-06 57.8 117 35.9
PSO566G0205 Papaver somniferum HOM05D001777 ORTHO05D001809 1.5e-06 57.8 93 41.9
Potri.006G160400 Populus trichocarpa HOM05D001777 ORTHO05D001809 1.5e-06 57.8 85 40.0
RcHm_v2.0_Chr2g0089991 Rosa chinensis HOM05D001777 ORTHO05D001809 1.5e-06 57.8 85 40.0
Atru.chr7.1370 Acer truncatum HOM05D001777 ORTHO05D001809 1.9e-06 57.4 85 40.0
Duzib187G1031 Durio zibethinus HOM05D001777 ORTHO05D001809 1.9e-06 57.4 80 41.2
FAN26G2851 Fragaria x ananassa HOM05D001777 ORTHO05D001809 1.9e-06 57.4 122 35.2
Sed0009271 Sechium edule HOM05D001777 ORTHO05D001809 1.9e-06 57.4 168 32.1
THA.LOC104804023 Tarenaya hassleriana HOM05D001777 ORTHO05D001809 1.9e-06 57.4 80 40.0
vmacro20720 Vaccinium macrocarpon HOM05D001777 ORTHO05D001809 1.9e-06 57.4 91 40.7
CDE05G0307 Ceratophyllum demersum HOM05D001777 ORTHO05D001809 2.5e-06 57.0 88 42.0
MELO3C024686.2 Cucumis melo HOM05D001777 ORTHO05D001809 2.5e-06 57.0 157 32.5
Duzib168G0347 Durio zibethinus HOM05D001777 ORTHO05D001809 2.5e-06 57.0 101 36.6
PSO782G0870 Papaver somniferum HOM05D001777 ORTHO05D001809 2.5e-06 57.0 93 41.9
TWI32G0444 Tripterygium wilfordii HOM05D001777 ORTHO05D001809 2.5e-06 57.0 85 38.8
Actinidia07406 Actinidia chinensis HOM05D001777 ORTHO05D001809 3.3e-06 56.6 85 40.0
ClCG11G002370 Citrullus lanatus HOM05D001777 ORTHO05D001809 3.3e-06 56.6 88 40.9
MELO3C004566.2 Cucumis melo HOM05D001777 ORTHO05D001809 3.3e-06 56.6 88 40.9
TWI34G0244 Tripterygium wilfordii HOM05D001777 ORTHO05D001809 3.3e-06 56.6 110 38.2
Glyma.08G037400 Glycine max HOM05D001777 ORTHO05D001809 4.3e-06 56.2 93 37.6
PSO384G2179 Papaver somniferum HOM05D001777 ORTHO05D001809 4.3e-06 56.2 93 40.9
Peaxi162Scf01363g00034 Petunia axillaris HOM05D001777 ORTHO05D001809 4.3e-06 56.2 98 37.8
QL12p029489 Quercus lobata HOM05D001777 ORTHO05D001809 4.3e-06 56.2 82 43.9
EL10Ac8g18443 Beta vulgaris HOM05D001777 ORTHO05D001809 5.6e-06 55.8 93 37.6
Sp7g26940 Schrenkiella parvula HOM05D001777 ORTHO05D001809 5.6e-06 55.8 85 38.8
BcaC09g51676 Brassica carinata HOM05D001777 ORTHO05D001809 7.3e-06 55.5 98 35.7
C01p10530 Brassica napus HOM05D001777 ORTHO05D006510 7.3e-06 55.5 98 35.7
Ciclev10007795m.g Citrus clementina HOM05D001777 ORTHO05D001809 7.3e-06 55.5 151 31.8
HanXRQChr06g0179211 Helianthus annuus HOM05D001777 ORTHO05D001809 7.3e-06 55.5 94 38.3
Sabra18G0070800 Salix brachista HOM05D001777 ORTHO05D001809 7.3e-06 55.5 88 39.8
Sopen07g008660 Solanum pennellii HOM05D001777 ORTHO05D001809 7.3e-06 55.5 88 38.6
THA.LOC104814714 Tarenaya hassleriana HOM05D001777 ORTHO05D001809 7.3e-06 55.5 80 40.0
TAR626G1043 Trochodendron aralioides HOM05D001777 ORTHO05D001809 7.3e-06 55.5 88 42.0
GSVIVG01015363001 Vitis vinifera HOM05D001777 ORTHO05D001809 7.3e-06 55.5 85 38.8
AT4G29000 Arabidopsis thaliana HOM05D001777 ORTHO05D001809 9.5e-06 55.1 84 39.3
A01p08990 Brassica napus HOM05D001777 ORTHO05D006510 9.5e-06 55.1 98 36.7
BolC1t01016H Brassica oleracea HOM05D001777 ORTHO05D006510 9.5e-06 55.1 98 35.7
CiPaw.03G229200 Carya illinoinensis HOM05D001777 ORTHO05D001809 9.5e-06 55.1 85 41.2
AUR62021466 Chenopodium quinoa HOM05D001777 ORTHO05D001809 9.5e-06 55.1 94 37.2
Ca_20228_v3 Cicer arietinum L. HOM05D001777 ORTHO05D001809 9.5e-06 55.1 85 41.2
Glyma.09G191600 Glycine max HOM05D001777 ORTHO05D001809 9.5e-06 55.1 87 41.4
Gohir.A07G005200 Gossypium hirsutum HOM05D001777 ORTHO05D001809 9.5e-06 55.1 88 39.8
Lj2g0010550 Lotus japonicus HOM05D001777 ORTHO05D001809 9.5e-06 55.1 85 38.8
Lalb_Chr05g0222991 Lupinus albus HOM05D001777 ORTHO05D001809 9.5e-06 55.1 117 35.0
Nitab4.5_0004391g0040 Nicotiana tabacum HOM05D001777 ORTHO05D001809 9.5e-06 55.1 92 34.8
PGR142G3402 Punica granatum HOM05D001777 ORTHO05D001809 9.5e-06 55.1 94 39.4
VMungo0464G1602 Vigna mungo HOM05D001777 ORTHO05D001809 9.5e-06 55.1 125 36.0


User provided reference genes

Program Settings