Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4135 Chara braunii HOM05D004844 ORTHO05D006036 0.0e+00 1543.9 908 100.0
AagrBONN_evm.TU.Sc2ySwM_228.4292 Anthoceros agrestis HOM05D004844 ORTHO05D006036 1.1e-152 545.0 916 46.3
Pp3c13_7740 Physcomitrium patens HOM05D004844 ORTHO05D006036 8.4e-150 535.4 900 46.9
Mapoly0013s0047 Marchantia polymorpha HOM05D004844 ORTHO05D006036 8.1e-145 518.8 909 44.1
MBI19_g00156_MAGBIO Magnolia biondii HOM05D004844 ORTHO05D006036 5.6e-138 496.1 835 43.0
Actinidia19906 Actinidia chinensis HOM05D004844 ORTHO05D006036 1.6e-132 478.0 923 38.6
CANSAT64G2735 Cannabis sativa HOM05D004844 ORTHO05D006036 1.8e-131 474.6 926 39.7
Phvul.007G274500 Phaseolus vulgaris HOM05D004844 ORTHO05D006036 3.0e-131 473.8 911 40.6
Cfa008853 Carpinus fangiana HOM05D004844 ORTHO05D006036 3.9e-131 473.4 919 38.6
CAN.G1021.26 Capsicum annuum HOM05D004844 ORTHO05D006036 5.7e-130 469.5 870 41.7
ATR0827G008 Amborella trichopoda HOM05D004844 ORTHO05D006036 7.4e-130 469.2 913 38.4
SGA_v2.0_scaffold287G47183 Striga asiatica HOM05D004844 ORTHO05D006036 3.7e-129 466.8 914 40.7
PGSC0003DMG400028356 Solanum tuberosum HOM05D004844 ORTHO05D006036 1.8e-128 464.5 898 39.0
Cc11_g11690 Coffea canephora HOM05D004844 ORTHO05D006036 2.4e-128 464.2 901 38.3
Sopen05g006740 Solanum pennellii HOM05D004844 ORTHO05D006036 4.1e-128 463.4 898 39.5
CSS0013036 Camellia sinensis var. sinensis HOM05D004844 ORTHO05D006036 6.9e-128 462.6 908 41.9
Solyc05g011990.4 Solanum lycopersicum HOM05D004844 ORTHO05D006036 3.4e-127 460.3 898 39.1
Rhsim12G0073500 Rhododendron simsii HOM05D004844 ORTHO05D006036 5.9e-127 459.5 910 38.6
Nitab4.5_0011617g0010 Nicotiana tabacum HOM05D004844 ORTHO05D006036 7.6e-127 459.1 896 40.3
TAR627G0787 Trochodendron aralioides HOM05D004844 ORTHO05D006036 7.6e-127 459.1 897 39.8
Thecc.02G325500 Theobroma cacao HOM05D004844 ORTHO05D006036 1.0e-126 458.8 915 39.2
Gohir.D04G190100 Gossypium hirsutum HOM05D004844 ORTHO05D006036 2.9e-126 457.2 903 40.3
Lj6g0000403 Lotus japonicus HOM05D004844 ORTHO05D006036 3.8e-126 456.8 904 41.3
Zm00001eb049910 Zea mays HOM05D004844 ORTHO05D006036 3.8e-126 456.8 897 41.4
Lsat_1_v5_gn_8_35620 Lactuca sativa HOM05D004844 ORTHO05D006036 6.5e-126 456.1 906 42.3
MELO3C011408.2 Cucumis melo HOM05D004844 ORTHO05D006036 4.2e-125 453.4 833 41.5
Nitab4.5_0000027g0110 Nicotiana tabacum HOM05D004844 ORTHO05D006036 5.5e-125 453.0 900 41.8
GSVIVG01012255001 Vitis vinifera HOM05D004844 ORTHO05D006036 5.5e-125 453.0 903 37.2
Gohir.A04G145600 Gossypium hirsutum HOM05D004844 ORTHO05D006036 9.3e-125 452.2 909 39.1
Gorai.012G185400 Gossypium raimondii HOM05D004844 ORTHO05D006036 9.3e-125 452.2 902 40.0
Eucgr.B03138 Eucalyptus grandis HOM05D004844 ORTHO05D006036 2.1e-124 451.1 846 44.0
Sabra10G0108200 Salix brachista HOM05D004844 ORTHO05D006036 3.6e-124 450.3 906 41.2
TWI79G0207 Tripterygium wilfordii HOM05D004844 ORTHO05D006036 6.1e-124 449.5 899 41.5
Cpa.g.sc1.164 Carica papaya HOM05D004844 ORTHO05D006036 7.9e-124 449.1 927 39.4
Glyma.10G005700 Glycine max HOM05D004844 ORTHO05D006036 7.9e-124 449.1 900 41.9
Os03g0598200 Oryza sativa ssp. japonica HOM05D004844 ORTHO05D006036 7.9e-124 449.1 898 40.9
EL10Ac6g14694 Beta vulgaris HOM05D004844 ORTHO05D006036 1.0e-123 448.7 913 38.8
Aqoxy3G03719 Aquilegia oxysepala HOM05D004844 ORTHO05D006036 1.3e-123 448.4 930 38.8
VMungo0720G2226 Vigna mungo HOM05D004844 ORTHO05D006036 3.0e-123 447.2 916 40.1
CDE10G1236 Ceratophyllum demersum HOM05D004844 ORTHO05D006036 8.7e-123 445.7 901 36.7
Nn4g23518 Nelumbo nucifera HOM05D004844 ORTHO05D006036 1.1e-122 445.3 875 41.4
THA.LOC104821991 Tarenaya hassleriana HOM05D004844 ORTHO05D006036 2.5e-122 444.1 912 38.5
Glyma.02G003100 Glycine max HOM05D004844 ORTHO05D006036 3.3e-122 443.7 911 38.5
Potri.010G140100 Populus trichocarpa HOM05D004844 ORTHO05D006036 1.3e-121 441.8 910 39.9
HanXRQChr06g0168931 Helianthus annuus HOM05D004844 ORTHO05D006036 1.6e-121 441.4 896 40.8
CsaV3_6G033830 Cucumis sativus L. HOM05D004844 ORTHO05D006036 4.8e-121 439.9 928 39.4
Migut.E00244 Erythranthe guttata HOM05D004844 ORTHO05D006036 6.3e-121 439.5 906 40.0
MD16G1058200 Malus domestica HOM05D004844 ORTHO05D006036 4.5e-119 433.3 937 36.6
Ciclev10030646m.g Citrus clementina HOM05D004844 ORTHO05D006036 7.7e-119 432.6 912 40.4
ClCG08G010550 Citrullus lanatus HOM05D004844 ORTHO05D006036 2.9e-118 430.6 832 43.1
Medtr1g442830 Medicago truncatula HOM05D004844 ORTHO05D006036 2.9e-118 430.6 913 38.7
Sc04g0007400 Simmondsia chinensis HOM05D004844 ORTHO05D006036 2.9e-118 430.6 898 37.6
Medtr1g064300 Medicago truncatula HOM05D004844 ORTHO05D006036 5.0e-118 429.9 918 39.7
COL.COLO4_27840 Corchorus olitorius HOM05D004844 ORTHO05D006036 8.5e-118 429.1 937 38.5
AUR62003071 Chenopodium quinoa HOM05D004844 ORTHO05D006036 1.1e-117 428.7 910 38.0
Psat1g047040 Pisum sativum HOM05D004844 ORTHO05D006036 1.1e-117 428.7 930 39.8
Aa31LG7G8740 Aethionema arabicum HOM05D004844 ORTHO05D006036 1.9e-117 427.9 904 37.4
Lalb_Chr25g0284481 Lupinus albus HOM05D004844 ORTHO05D006036 3.2e-117 427.2 825 44.6
PGR102G1068 Punica granatum HOM05D004844 ORTHO05D006036 4.2e-117 426.8 910 41.1
MSTRG.13461 Avicennia marina HOM05D004844 ORTHO05D006036 7.2e-117 426.0 902 39.9
Prupe.1G290900 Prunus persica HOM05D004844 ORTHO05D006036 7.2e-117 426.0 942 37.5
RcHm_v2.0_Chr4g0437801 Rosa chinensis HOM05D004844 ORTHO05D006036 7.2e-117 426.0 830 38.1
SalBow4G3252 Salvia bowleyana HOM05D004844 ORTHO05D006036 7.2e-117 426.0 963 39.7
Ca_12009_v3 Cicer arietinum L. HOM05D004844 ORTHO05D006036 1.2e-116 425.2 914 39.4
DCAR_022184 Daucus carota HOM05D004844 ORTHO05D006036 1.2e-116 425.2 901 35.5
AT1G69070 Arabidopsis thaliana HOM05D004844 ORTHO05D006036 1.6e-116 424.9 911 37.2
ECA233G1780 Erigeron canadensis HOM05D004844 ORTHO05D006036 2.7e-116 424.1 905 39.7
arahy.Tifrunner.gnm1.ann1.H7MRPA Arachis hypogaea HOM05D004844 ORTHO05D006036 6.1e-116 422.9 936 39.1
FAN17G0509 Fragaria x ananassa HOM05D004844 ORTHO05D006036 7.9e-116 422.5 878 38.2
Carub.0002s1569 Capsella rubella HOM05D004844 ORTHO05D006036 1.0e-115 422.2 913 36.8
Manes.17G024283 Manihot esculenta HOM05D004844 ORTHO05D006036 1.4e-115 421.8 913 38.0
AL2G28120 Arabidopsis lyrata HOM05D004844 ORTHO05D006036 1.8e-115 421.4 899 37.2
CARHR061950 Cardamine hirsuta HOM05D004844 ORTHO05D006036 1.1e-114 418.7 906 36.3
Thhalv10018096m.g Eutrema salsugineum HOM05D004844 ORTHO05D006036 1.5e-114 418.3 919 35.9
arahy.Tifrunner.gnm1.ann1.Q1MRHA Arachis hypogaea HOM05D004844 ORTHO05D006036 2.0e-114 417.9 905 40.8
Ah.03g138670 Amaranthus hybridus HOM05D004844 ORTHO05D006036 4.4e-114 416.8 916 37.0
FAN12G1456 Fragaria x ananassa HOM05D004844 ORTHO05D006036 7.4e-114 416.0 896 37.6
arahy.Tifrunner.gnm1.ann1.79UB1D Arachis hypogaea HOM05D004844 ORTHO05D006036 4.8e-113 413.3 940 37.9
Dinv20143 Davidia involucrata HOM05D004844 ORTHO05D006036 3.1e-112 410.6 773 41.9
FAN22G0359 Fragaria x ananassa HOM05D004844 ORTHO05D006036 4.1e-112 410.2 872 36.7
Sed0010809 Sechium edule HOM05D004844 ORTHO05D006036 5.3e-112 409.8 899 38.2
AUR62007885 Chenopodium quinoa HOM05D004844 ORTHO05D006036 9.1e-112 409.1 908 35.1
Sp5g24170 Schrenkiella parvula HOM05D004844 ORTHO05D006036 2.2e-110 404.4 910 35.9
C02p25790 Brassica napus HOM05D004844 ORTHO05D006036 2.9e-110 404.1 874 36.6
Duzib251G0783 Durio zibethinus HOM05D004844 ORTHO05D006036 5.0e-110 403.3 906 38.4
PSO063G4789 Papaver somniferum HOM05D004844 ORTHO05D006036 2.5e-109 401.0 910 36.8
FvH4_4g29570 Fragaria vesca HOM05D004844 ORTHO05D006036 4.2e-109 400.2 890 38.7
PSO782G4088 Papaver somniferum HOM05D004844 ORTHO05D006036 1.4e-107 395.2 907 36.8
Atru.BG.298.p Acer truncatum HOM05D004844 ORTHO05D006036 5.2e-107 393.3 897 34.8
A02p15610 Brassica napus HOM05D004844 ORTHO05D006036 1.3e-105 388.7 916 34.3
Peaxi162Scf00175g00927 Petunia axillaris HOM05D004844 ORTHO05D006036 8.2e-105 386.0 855 36.7
BolC2t08648H Brassica oleracea HOM05D004844 ORTHO05D006036 1.2e-103 382.1 875 35.3
FAN07G0902 Fragaria x ananassa HOM05D004844 ORTHO05D006036 1.2e-103 382.1 893 35.5
TPR.G25170 Trifolium pratense HOM05D004844 ORTHO05D006036 2.6e-103 380.9 458 45.2
BraA02t06622Z Brassica rapa HOM05D004844 ORTHO05D006036 1.6e-100 371.7 924 33.2
CiPaw.06G094100 Carya illinoinensis HOM05D004844 ORTHO05D006036 1.5e-98 365.2 836 37.0
Lj6A775T24 Lonicera japonica HOM05D004844 ORTHO05D006036 1.7e-97 361.7 919 35.3
BcaC03g15030 Brassica carinata HOM05D004844 ORTHO05D006036 1.8e-91 341.7 529 38.8
Glyma.18G236233 Glycine max HOM05D004844 ORTHO05D006036 4.1e-88 330.5 409 45.7
Oeu019000.3 Olea europaea HOM05D004844 ORTHO05D006036 1.3e-86 325.5 747 38.7
Nitab4.5_0000027g0130 Nicotiana tabacum HOM05D004844 ORTHO05D006036 1.5e-82 312.0 528 40.5
PRCOL_00006390 Prasinoderma coloniale HOM05D004844 ORTHO05D006036 4.6e-71 273.9 919 33.8
SEGI_27898 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.1e-67 262.7 538 43.3
MD13G1058900 Malus domestica HOM05D004844 ORTHO05D006036 1.3e-65 255.8 791 31.9
Medtr1g442820 Medicago truncatula HOM05D004844 ORTHO05D006036 1.2e-63 249.2 647 36.5
Oeu063767.1 Olea europaea HOM05D004844 ORTHO05D006036 1.6e-63 248.8 569 38.3
unitig_62.g23699 Utricularia gibba HOM05D004844 ORTHO05D006036 4.7e-60 237.3 464 35.3
SEGI_13774 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.2e-58 232.6 270 46.7
TAR623G1540 Trochodendron aralioides HOM05D004844 ORTHO05D006036 1.4e-48 199.1 282 44.7
Cre06.g260850 Chlamydomonas reinhardtii HOM05D004844 ORTHO05D006036 7.8e-47 193.4 1053 28.3
HPP92_012262 Vanilla planifolia HOM05D004844 ORTHO05D008684 8.1e-44 183.3 277 41.9
SEGI_03778 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 1.6e-36 159.1 450 38.9
TAR627G1107 Trochodendron aralioides HOM05D004844 ORTHO05D006036 9.0e-35 153.3 557 36.6
TAR623G0992 Trochodendron aralioides HOM05D004844 ORTHO05D006036 3.4e-34 151.4 165 52.7
AagrBONN_evm.TU.Sc2ySwM_362.1117 Anthoceros agrestis HOM05D004844 ORTHO05D006036 9.3e-32 143.3 362 45.6
MCO13G646 Micromonas commoda HOM05D004844 ORTHO05D006036 4.0e-27 127.9 656 29.4
Rhsim10G0117800 Rhododendron simsii HOM05D004844 ORTHO05D006036 7.6e-26 123.6 200 38.0
SEGI_15727 Sequoiadendron giganteum HOM05D004844 ORTHO05D006036 2.3e-22 112.1 116 54.3
Glyma.18G236167 Glycine max HOM05D004844 ORTHO05D006036 6.7e-22 110.5 252 39.3
BolC2t08646H Brassica oleracea HOM05D004844 ORTHO05D006036 3.4e-18 98.2 90 56.7
C02p25770 Brassica napus HOM05D004844 ORTHO05D006036 1.7e-17 95.9 90 56.7
TPR.G25179 Trifolium pratense HOM05D004844 ORTHO05D006036 4.9e-17 94.4 226 38.1
EL10Ac3g06594 Beta vulgaris HOM05D004844 ORTHO05D006036 3.5e-15 88.2 98 44.9
Cfa022757 Carpinus fangiana HOM05D004844 ORTHO05D126324 3.0e-14 85.1 157 36.9
EL10Ac6g14485 Beta vulgaris HOM05D004844 ORTHO05D006036 1.9e-13 82.4 114 40.4
EL10Ac5g11674 Beta vulgaris HOM05D004844 ORTHO05D010835 3.7e-12 78.2 154 34.4
MD13G1058800 Malus domestica HOM05D004844 ORTHO05D006036 3.4e-10 71.6 72 56.9
RcHm_v2.0_Chr1g0340811 Rosa chinensis HOM05D004844 ORTHO05D006036 4.5e-10 71.2 57 63.2
TAR623G0736 Trochodendron aralioides HOM05D004844 ORTHO05D006036 5.0e-09 67.8 242 30.2
unitig_62.g23698 Utricularia gibba HOM05D004844 ORTHO05D006036 1.0e-06 60.1 136 34.6


User provided reference genes

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