Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g41204 Chara braunii HOM05D006411 ORTHO05D007563 2.2e-151 538.9 263 100.0
Sp3g20930 Schrenkiella parvula HOM05D006411 ORTHO05D007563 8.9e-44 181.4 213 46.0
C07p14190 Brassica napus HOM05D006411 ORTHO05D007563 2.0e-43 180.3 213 46.9
BolC7t41915H Brassica oleracea HOM05D006411 ORTHO05D007563 2.0e-43 180.3 235 44.7
AL3G37910 Arabidopsis lyrata HOM05D006411 ORTHO05D007563 4.4e-43 179.1 234 41.5
SEGI_29411 Sequoiadendron giganteum HOM05D006411 ORTHO05D007563 7.5e-43 178.3 224 42.4
Nn1g07843 Nelumbo nucifera HOM05D006411 ORTHO05D007563 3.7e-42 176.0 235 40.9
AT3G23255 Arabidopsis thaliana HOM05D006411 ORTHO05D007563 4.9e-42 175.6 216 43.1
Carub.0003s2350 Capsella rubella HOM05D006411 ORTHO05D007563 6.4e-42 175.3 211 45.5
BraA07t28715Z Brassica rapa HOM05D006411 ORTHO05D007563 8.3e-42 174.9 231 45.0
ATR0751G011 Amborella trichopoda HOM05D006411 ORTHO05D006707 1.1e-41 174.5 220 45.0
A07p09200 Brassica napus HOM05D006411 ORTHO05D007563 1.4e-41 174.1 220 44.5
BcaB06g26470 Brassica carinata HOM05D006411 ORTHO05D007563 1.9e-41 173.7 213 44.6
Pp3c2_21820 Physcomitrium patens HOM05D006411 ORTHO05D007563 1.9e-41 173.7 250 40.0
Thhalv10021467m.g Eutrema salsugineum HOM05D006411 ORTHO05D007563 3.2e-41 172.9 232 43.5
Aa31LG8G9800 Aethionema arabicum HOM05D006411 ORTHO05D007563 4.1e-41 172.6 210 42.4
Atru.chr12.1401 Acer truncatum HOM05D006411 ORTHO05D007563 3.5e-40 169.5 205 44.9
TAR371G0942 Trochodendron aralioides HOM05D006411 ORTHO05D007563 6.0e-40 168.7 221 42.5
Sabra03G0118900 Salix brachista HOM05D006411 ORTHO05D007563 2.3e-39 166.8 199 45.2
CARHR099210 Cardamine hirsuta HOM05D006411 ORTHO05D007563 3.0e-39 166.4 200 41.5
MD13G1129600 Malus domestica HOM05D006411 ORTHO05D007563 3.0e-39 166.4 241 41.1
THA.LOC104808624 Tarenaya hassleriana HOM05D006411 ORTHO05D007563 3.0e-39 166.4 236 40.3
GSVIVG01004943001 Vitis vinifera HOM05D006411 ORTHO05D007563 3.9e-39 166.0 219 43.8
PSO765G0094 Papaver somniferum HOM05D006411 ORTHO05D007563 8.6e-39 164.9 206 44.2
Nn3g20757 Nelumbo nucifera HOM05D006411 ORTHO05D007563 1.1e-38 164.5 187 45.5
Duzib132G0393 Durio zibethinus HOM05D006411 ORTHO05D007563 1.5e-38 164.1 214 42.1
TWI18G1006 Tripterygium wilfordii HOM05D006411 ORTHO05D007563 9.5e-38 161.4 185 45.9
Prupe.1G216800 Prunus persica HOM05D006411 ORTHO05D007563 2.1e-37 160.2 239 40.2
Aqoxy5G03164 Aquilegia oxysepala HOM05D006411 ORTHO05D007563 3.6e-37 159.5 204 41.7
Manes.09G187200 Manihot esculenta HOM05D006411 ORTHO05D007563 4.7e-37 159.1 185 46.5
Nitab4.5_0003020g0130 Nicotiana tabacum HOM05D006411 ORTHO05D007563 4.7e-37 159.1 204 40.7
Carub.0137s0001 Capsella rubella HOM05D006411 ORTHO05D007563 6.2e-37 158.7 182 45.6
Ciclev10005785m.g Citrus clementina HOM05D006411 ORTHO05D007563 1.1e-36 157.9 205 42.4
Gorai.002G163700 Gossypium raimondii HOM05D006411 ORTHO05D007563 1.1e-36 157.9 207 42.5
Gohir.A01G141100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.4e-36 157.5 207 42.0
Glyma.11G109300 Glycine max HOM05D006411 ORTHO05D007563 2.4e-36 156.8 181 44.8
MD16G1129800 Malus domestica HOM05D006411 ORTHO05D007563 3.1e-36 156.4 206 42.7
FAN17G2521 Fragaria x ananassa HOM05D006411 ORTHO05D007563 4.0e-36 156.0 231 40.7
Dinv09212 Davidia involucrata HOM05D006411 ORTHO05D007563 6.8e-36 155.2 225 38.7
Actinidia09598 Actinidia chinensis HOM05D006411 ORTHO05D007563 8.9e-36 154.8 238 36.1
Lj3g0004314 Lotus japonicus HOM05D006411 ORTHO05D007563 8.9e-36 154.8 187 43.3
Cfa009441 Carpinus fangiana HOM05D006411 ORTHO05D007563 1.2e-35 154.5 183 43.7
Haze_12492 Corylus avellana HOM05D006411 ORTHO05D007563 1.5e-35 154.1 184 44.0
PSO349G0017 Papaver somniferum HOM05D006411 ORTHO05D007563 1.5e-35 154.1 213 39.4
CsaV3_6G007790 Cucumis sativus L. HOM05D006411 ORTHO05D007563 2.0e-35 153.7 183 44.3
RcHm_v2.0_Chr4g0429021 Rosa chinensis HOM05D006411 ORTHO05D007563 2.0e-35 153.7 215 41.4
FvH4_4g22791 Fragaria vesca HOM05D006411 ORTHO05D007563 2.6e-35 153.3 229 40.6
Psat7g169880 Pisum sativum HOM05D006411 ORTHO05D007563 3.4e-35 152.9 239 41.4
Lsat_1_v5_gn_2_17720 Lactuca sativa HOM05D006411 ORTHO05D007563 7.6e-35 151.8 218 36.7
SalBow2G2156 Salvia bowleyana HOM05D006411 ORTHO05D007563 7.6e-35 151.8 203 38.4
Os10g0466100 Oryza sativa ssp. japonica HOM05D006411 ORTHO05D007563 9.9e-35 151.4 223 39.9
SalBow7G1895 Salvia bowleyana HOM05D006411 ORTHO05D007563 9.9e-35 151.4 203 38.4
Thecc.02G193900 Theobroma cacao HOM05D006411 ORTHO05D007563 9.9e-35 151.4 177 45.2
QL03p049668 Quercus lobata HOM05D006411 ORTHO05D007563 1.3e-34 151.0 183 43.2
Solyc12g016210.2 Solanum lycopersicum HOM05D006411 ORTHO05D007563 1.3e-34 151.0 174 43.7
Sopen12g008000 Solanum pennellii HOM05D006411 ORTHO05D007563 1.3e-34 151.0 174 43.7
FAN12G0338 Fragaria x ananassa HOM05D002780 ORTHO05D003254 1.7e-34 150.6 238 37.8
TPR.G28023 Trifolium pratense HOM05D006411 ORTHO05D007563 1.7e-34 150.6 216 41.2
AagrBONN_evm.TU.Sc2ySwM_344.2329 Anthoceros agrestis HOM05D014047 ORTHO05D007563 2.2e-34 150.2 226 41.2
CAN.G529.4 Capsicum annuum HOM05D006411 ORTHO05D007563 2.9e-34 149.8 215 39.1
Sed0009782 Sechium edule HOM05D006411 ORTHO05D007563 2.9e-34 149.8 215 40.0
MSTRG.461 Avicennia marina HOM05D006411 ORTHO05D007563 8.4e-34 148.3 203 40.9
Ah.03g135590 Amaranthus hybridus HOM05D006411 ORTHO05D007563 1.9e-33 147.1 208 40.4
Nitab4.5_0002671g0040 Nicotiana tabacum HOM05D006411 ORTHO05D007563 1.9e-33 147.1 217 38.7
CSS0035608 Camellia sinensis var. sinensis HOM05D006411 ORTHO05D007563 2.4e-33 146.7 216 37.5
Oeu044509.2 Olea europaea HOM05D006411 ORTHO05D007563 2.4e-33 146.7 174 42.0
SGA_v2.0_scaffold80G25942 Striga asiatica HOM05D006411 ORTHO05D007563 3.2e-33 146.4 219 38.4
HPP92_007040 Vanilla planifolia HOM05D006411 ORTHO05D007563 3.2e-33 146.4 215 40.0
Sc11g0000150 Simmondsia chinensis HOM05D006411 ORTHO05D007563 5.4e-33 145.6 176 42.6
Zm00001eb222220 Zea mays HOM05D006411 ORTHO05D007563 5.4e-33 145.6 206 40.8
VMungo1127G0609 Vigna mungo HOM05D006411 ORTHO05D007563 7.1e-33 145.2 185 42.7
EL10Ac6g13598 Beta vulgaris HOM05D006411 ORTHO05D007563 2.7e-32 143.3 220 40.0
AUR62031618 Chenopodium quinoa HOM05D006411 ORTHO05D007563 7.8e-32 141.7 255 38.0
Migut.K01066 Erythranthe guttata HOM05D006411 ORTHO05D007563 1.0e-31 141.4 171 42.1
CANSAT01G2250 Cannabis sativa HOM05D006411 ORTHO05D007563 1.3e-31 141.0 202 37.6
Gohir.D01G132100 Gossypium hirsutum HOM05D006411 ORTHO05D007563 1.7e-31 140.6 168 44.6
RhsimUnG0101400 Rhododendron simsii HOM05D006411 ORTHO05D007563 2.3e-31 140.2 177 41.8
SHI04127 Sapria himalayana HOM05D006411 ORTHO05D007563 3.0e-31 139.8 191 40.8
Hund06130 Selenicereus undatus HOM05D006411 ORTHO05D007563 1.5e-30 137.5 224 37.9
Phvul.011G018400 Phaseolus vulgaris HOM05D006411 ORTHO05D007563 3.3e-30 136.3 160 46.2
ECA238G0094 Erigeron canadensis HOM05D006411 ORTHO05D007563 1.2e-29 134.4 228 35.1
Ca_18949_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 2.1e-29 133.7 203 37.9
Ca_29765_v3 Cicer arietinum L. HOM05D001211 ORTHO05D001084 2.1e-29 133.7 203 37.9
Mapoly0164s0017 Marchantia polymorpha HOM05D006411 ORTHO05D007563 6.2e-29 132.1 212 35.8
HanXRQChr17g0559141 Helianthus annuus HOM05D006411 ORTHO05D007563 1.1e-28 131.3 212 36.8
PGR119G0335 Punica granatum HOM05D006411 ORTHO05D007563 1.1e-28 131.3 239 36.4
Cc11_g15120 Coffea canephora HOM05D006411 ORTHO05D007563 4.0e-28 129.4 210 35.2
arahy.Tifrunner.gnm1.ann1.ZM7ZD1 Arachis hypogaea HOM05D006411 ORTHO05D007563 6.9e-28 128.6 136 46.3
Medtr4g078190 Medicago truncatula HOM05D006411 ORTHO05D007563 5.8e-27 125.6 143 45.5
Nn3g17917 Nelumbo nucifera HOM05D006411 ORTHO05D007563 9.9e-27 124.8 164 40.2
Lalb_Chr19g0140051 Lupinus albus HOM05D006411 ORTHO05D007563 1.3e-26 124.4 212 36.3
Actinidia34001 Actinidia chinensis HOM05D006411 ORTHO05D007563 5.4e-25 119.0 181 33.7
CiPaw.05G102200 Carya illinoinensis HOM05D006411 ORTHO05D007563 3.5e-24 116.3 208 36.1
MCO06G175 Micromonas commoda HOM05D006411 ORTHO05D007563 2.1e-21 107.1 187 36.4
Nn2g15361 Nelumbo nucifera HOM05D006411 ORTHO05D007563 5.3e-20 102.4 169 35.5
ClCG06G001760 Citrullus lanatus HOM05D006411 ORTHO05D007563 3.8e-18 96.3 182 34.1
MELO3C022353.2 Cucumis melo HOM05D006411 ORTHO05D007563 1.1e-17 94.7 169 33.7
vmacro10313 Vaccinium macrocarpon HOM05D006411 ORTHO05D007563 4.2e-17 92.8 126 37.3
COL.COLO4_21790 Corchorus olitorius HOM05D006411 ORTHO05D007563 2.1e-16 90.5 159 36.5
Lj5A251G70 Lonicera japonica HOM05D006411 ORTHO05D007563 3.5e-16 89.7 177 32.8
Cre03.g180500 Chlamydomonas reinhardtii HOM05D006411 ORTHO05D007563 7.9e-16 88.6 169 33.7
Potri.003G163500 Populus trichocarpa HOM05D006411 ORTHO05D007563 1.3e-15 87.8 124 39.5
Lj5g0007299 Lotus japonicus HOM05D006411 ORTHO05D007563 2.3e-15 87.0 147 35.4
Nn7g35833 Nelumbo nucifera HOM05D006411 ORTHO05D007563 2.8e-13 80.1 76 51.3
SMO119G0262 Selaginella moellendorffii HOM05D006411 ORTHO05D007563 3.4e-11 73.2 135 30.4
SHI32270 Sapria himalayana HOM05D006411 ORTHO05D007563 2.2e-10 70.5 126 35.7
FvH4_4g07260 Fragaria vesca HOM05D006411 ORTHO05D007563 1.9e-09 67.4 104 38.5
Dinv15386 Davidia involucrata HOM05D006411 ORTHO05D007563 9.6e-06 55.1 55 38.2


User provided reference genes

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