Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g41139 Chara braunii HOM05D004696 ORTHO05D005645 3.2e-181 638.6 379 100.0
Pp3c7_450 Physcomitrium patens HOM05D004696 ORTHO05D005645 3.7e-36 156.8 155 50.3
Mapoly0084s0020 Marchantia polymorpha HOM05D004696 ORTHO05D005645 5.3e-35 152.9 151 51.7
Lsat_1_v5_gn_6_92581 Lactuca sativa HOM05D004696 ORTHO05D005645 1.5e-34 151.4 158 47.5
CDE06G2579 Ceratophyllum demersum HOM05D005139 ORTHO05D006125 2.6e-34 150.6 147 51.0
Lsat_1_v5_gn_1_39920 Lactuca sativa HOM05D004696 ORTHO05D005645 4.5e-34 149.8 163 45.4
Aqoxy5G04183 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 1.0e-33 148.7 141 48.9
THA.LOC104827108 Tarenaya hassleriana HOM05D004696 ORTHO05D005645 1.0e-33 148.7 146 50.7
Eucgr.B03956 Eucalyptus grandis HOM05D004696 ORTHO05D005645 1.3e-33 148.3 140 51.4
HanXRQChr09g0238571 Helianthus annuus HOM05D004696 ORTHO05D005645 2.2e-33 147.5 158 46.8
Manes.11G020900 Manihot esculenta HOM05D004696 ORTHO05D005645 1.1e-32 145.2 138 47.8
Aqoxy4G02417 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 1.9e-32 144.4 141 48.2
ECA220G0002 Erigeron canadensis HOM05D004696 ORTHO05D005645 1.9e-32 144.4 132 50.0
Sabra02G0114900 Salix brachista HOM05D004696 ORTHO05D005645 1.9e-32 144.4 169 44.4
Glyma.11G024900 Glycine max HOM05D004696 ORTHO05D005645 4.2e-32 143.3 155 45.2
Phvul.010G140500 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 4.2e-32 143.3 138 47.1
Potri.010G002100 Populus trichocarpa HOM05D004696 ORTHO05D005645 4.2e-32 143.3 159 46.5
Dinv29511 Davidia involucrata HOM05D004696 ORTHO05D005645 5.5e-32 142.9 142 47.2
SMO139G0013 Selaginella moellendorffii HOM05D004696 ORTHO05D005645 5.5e-32 142.9 183 47.0
CsaV3_6G008150 Cucumis sativus L. HOM05D004696 ORTHO05D005645 7.1e-32 142.5 152 44.7
Ah.06g192450 Amaranthus hybridus HOM05D004696 ORTHO05D005645 9.3e-32 142.1 132 48.5
Ah.16g105210 Amaranthus hybridus HOM05D004696 ORTHO05D005645 9.3e-32 142.1 140 47.1
Glyma.01G218300 Glycine max HOM05D004696 ORTHO05D005645 9.3e-32 142.1 156 44.2
Lalb_Chr17g0338851 Lupinus albus HOM05D004696 ORTHO05D005645 9.3e-32 142.1 147 45.6
Manes.03G211700 Manihot esculenta HOM05D004696 ORTHO05D005645 9.3e-32 142.1 138 47.1
Cpa.g.sc146.25 Carica papaya HOM05D004696 ORTHO05D005645 1.2e-31 141.7 141 47.5
Ciclev10005920m.g Citrus clementina HOM05D004696 ORTHO05D005645 1.2e-31 141.7 159 44.0
Solyc05g053220.3 Solanum lycopersicum HOM05D004696 ORTHO05D005645 1.2e-31 141.7 173 42.8
Sopen05g031730 Solanum pennellii HOM05D004696 ORTHO05D005645 1.2e-31 141.7 173 42.8
PGSC0003DMG400027150 Solanum tuberosum HOM05D004696 ORTHO05D005645 1.2e-31 141.7 138 48.6
CSS0007787 Camellia sinensis var. sinensis HOM05D004696 ORTHO05D005645 2.1e-31 141.0 165 43.6
AUR62015697 Chenopodium quinoa HOM05D004696 ORTHO05D005645 2.1e-31 141.0 196 40.8
Potri.008G206400 Populus trichocarpa HOM05D004696 ORTHO05D005645 2.1e-31 141.0 160 45.6
PGR031G3538 Punica granatum HOM05D004696 ORTHO05D005645 2.1e-31 141.0 159 45.9
Thecc.04G312600 Theobroma cacao HOM05D004696 ORTHO05D005645 2.1e-31 141.0 132 50.0
VMungo0331G1167 Vigna mungo HOM05D004696 ORTHO05D005645 2.1e-31 141.0 138 46.4
Sed0019137 Sechium edule HOM05D004696 ORTHO05D005645 2.7e-31 140.6 143 45.5
CAN.G305.38 Capsicum annuum HOM05D004696 ORTHO05D005645 3.5e-31 140.2 138 47.8
Migut.N00002 Erythranthe guttata HOM05D004696 ORTHO05D005645 3.5e-31 140.2 159 44.7
Glyma.14G125600 Glycine max HOM05D004696 ORTHO05D005645 3.5e-31 140.2 150 45.3
Psat7g133720 Pisum sativum HOM05D004696 ORTHO05D005645 3.5e-31 140.2 159 42.8
Actinidia22921 Actinidia chinensis HOM05D004696 ORTHO05D005645 4.6e-31 139.8 142 46.5
Dinv18020 Davidia involucrata HOM05D004696 ORTHO05D005645 4.6e-31 139.8 142 47.9
Psat1g042400 Pisum sativum HOM05D004696 ORTHO05D005645 6.0e-31 139.4 156 44.2
TWI73G0566 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 6.0e-31 139.4 151 45.7
AUR62020507 Chenopodium quinoa HOM05D004696 ORTHO05D005645 7.9e-31 139.0 145 46.2
Gohir.A02G058200 Gossypium hirsutum HOM05D004696 ORTHO05D005645 7.9e-31 139.0 132 49.2
Gorai.005G071900 Gossypium raimondii HOM05D004696 ORTHO05D005645 7.9e-31 139.0 132 49.2
PSO782G4648 Papaver somniferum HOM05D004696 ORTHO05D005645 7.9e-31 139.0 142 49.3
TAR629G2307 Trochodendron aralioides HOM05D004696 ORTHO05D005645 7.9e-31 139.0 142 47.2
CiPaw.02G069300 Carya illinoinensis HOM05D004696 ORTHO05D005645 1.0e-30 138.7 149 45.0
Duzib151G0078 Durio zibethinus HOM05D004696 ORTHO05D005645 1.0e-30 138.7 132 50.0
Lalb_Chr10g0096421 Lupinus albus HOM05D004696 ORTHO05D005645 1.0e-30 138.7 156 42.9
PSO478G3068 Papaver somniferum HOM05D004696 ORTHO05D005645 1.0e-30 138.7 142 49.3
Oeu022705.1 Olea europaea HOM05D004696 ORTHO05D005645 1.3e-30 138.3 143 50.3
MSTRG.24614 Avicennia marina HOM05D004696 ORTHO05D005645 1.8e-30 137.9 142 46.5
MD07G1065600 Malus domestica HOM05D004696 ORTHO05D005645 1.8e-30 137.9 133 51.9
MD16G1136700 Malus domestica HOM05D004696 ORTHO05D005645 1.8e-30 137.9 133 51.9
GSVIVG01017685001 Vitis vinifera HOM05D004696 ORTHO05D005645 1.8e-30 137.9 151 44.4
CANSAT78G0332 Cannabis sativa HOM05D004696 ORTHO05D005645 2.3e-30 137.5 157 45.2
unitig_8.g2889 Utricularia gibba HOM05D004696 ORTHO05D005645 2.3e-30 137.5 159 44.7
Phvul.003G045400 Phaseolus vulgaris HOM05D004696 ORTHO05D005645 3.0e-30 137.1 138 44.9
Cc00_g15640 Coffea canephora HOM05D004696 ORTHO05D005645 5.1e-30 136.3 149 47.7
MD13G1140700 Malus domestica HOM05D004696 ORTHO05D005645 6.7e-30 136.0 133 50.4
Gohir.D02G064000 Gossypium hirsutum HOM05D004696 ORTHO05D005645 8.7e-30 135.6 132 48.5
Os02g0730500 Oryza sativa ssp. japonica HOM05D004696 ORTHO05D005645 8.7e-30 135.6 138 47.1
Medtr5g081850 Medicago truncatula HOM05D004696 ORTHO05D005645 1.5e-29 134.8 147 41.5
Prupe.1G105700 Prunus persica HOM05D004696 ORTHO05D005645 1.5e-29 134.8 135 48.9
Sabra02G0116500 Salix brachista HOM05D004696 ORTHO05D005645 1.5e-29 134.8 189 40.2
Sc17g0002920 Simmondsia chinensis HOM05D004696 ORTHO05D005645 1.5e-29 134.8 132 46.2
Cfa015727 Carpinus fangiana HOM05D004696 ORTHO05D005645 1.9e-29 134.4 147 43.5
Sabra08G0150400 Salix brachista HOM05D004696 ORTHO05D005645 1.9e-29 134.4 189 40.2
Atru.chr4.3144 Acer truncatum HOM05D004696 ORTHO05D005645 2.5e-29 134.0 146 45.2
ECA248G3148 Erigeron canadensis HOM05D004696 ORTHO05D005645 2.5e-29 134.0 127 49.6
Lj2g0021207 Lotus japonicus HOM05D004696 ORTHO05D005645 2.5e-29 134.0 150 44.0
Cc03_g00150 Coffea canephora HOM05D004696 ORTHO05D005645 4.3e-29 133.3 191 40.3
vmacro08011 Vaccinium macrocarpon HOM05D004696 ORTHO05D005645 4.3e-29 133.3 155 43.2
EL10Ac4g08571 Beta vulgaris HOM05D004696 ORTHO05D005645 5.7e-29 132.9 145 44.8
TWI09G0971 Tripterygium wilfordii HOM05D004696 ORTHO05D005645 5.7e-29 132.9 151 43.7
Haze_00771 Corylus avellana HOM05D004696 ORTHO05D005645 7.4e-29 132.5 147 42.9
Aqoxy3G02973 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 9.6e-29 132.1 141 46.1
SEGI_16783 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 9.6e-29 132.1 132 49.2
SEGI_41631 Sequoiadendron giganteum HOM05D004696 ORTHO05D005645 9.6e-29 132.1 132 49.2
RcHm_v2.0_Chr4g0427441 Rosa chinensis HOM05D004696 ORTHO05D005645 2.1e-28 131.0 132 47.7
Zm00001eb189970 Zea mays HOM05D004696 ORTHO05D005645 2.1e-28 131.0 138 45.7
Lj4g0004970 Lotus japonicus HOM05D004696 ORTHO05D005645 2.8e-28 130.6 131 45.0
MBI03_g01483_MAGBIO Magnolia biondii HOM05D004696 ORTHO05D005645 3.7e-28 130.2 132 45.5
AagrBONN_evm.TU.Sc2ySwM_368.1627 Anthoceros agrestis HOM05D004696 ORTHO05D005645 6.2e-28 129.4 130 50.0
arahy.Tifrunner.gnm1.ann1.61U0KE Arachis hypogaea HOM05D004696 ORTHO05D005645 6.2e-28 129.4 151 43.0
SalBow2G0725 Salvia bowleyana HOM05D001196 ORTHO05D005911 8.2e-28 129.0 172 41.9
arahy.Tifrunner.gnm1.ann1.NQRV37 Arachis hypogaea HOM05D004696 ORTHO05D005645 1.4e-27 128.3 151 43.0
FvH4_4g21490 Fragaria vesca HOM05D004696 ORTHO05D005645 5.3e-27 126.3 132 45.5
FAN12G0616 Fragaria x ananassa HOM05D004696 ORTHO05D005645 5.3e-27 126.3 132 45.5
TPR.G8061 Trifolium pratense HOM05D004696 ORTHO05D005645 5.3e-27 126.3 148 41.2
arahy.Tifrunner.gnm1.ann1.BY2PXQ Arachis hypogaea HOM05D004696 ORTHO05D005645 6.9e-27 125.9 151 42.4
CARHR185500 Cardamine hirsuta HOM05D004696 ORTHO05D005645 6.9e-27 125.9 183 40.4
FAN07G1680 Fragaria x ananassa HOM05D004696 ORTHO05D005645 9.0e-27 125.6 132 45.5
PSO063G5897 Papaver somniferum HOM05D004696 ORTHO05D005645 1.2e-26 125.2 142 45.1
SGA_v2.0_scaffold49G18399 Striga asiatica HOM05D004696 ORTHO05D005645 1.2e-26 125.2 145 44.1
BcaB04g19639 Brassica carinata HOM05D004696 ORTHO05D005645 1.5e-26 124.8 146 44.5
Cfa024688 Carpinus fangiana HOM05D004696 ORTHO05D005645 2.6e-26 124.0 131 48.1
QL06p014174 Quercus lobata HOM05D004696 ORTHO05D005645 2.6e-26 124.0 153 41.2
AT5G30495 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 3.4e-26 123.6 140 47.1
AL6G41010 Arabidopsis lyrata HOM05D004696 ORTHO05D005645 5.8e-26 122.9 140 46.4
Carub.0002s0865 Capsella rubella HOM05D004696 ORTHO05D005645 1.3e-25 121.7 147 43.5
Sp2g19960 Schrenkiella parvula HOM05D004696 ORTHO05D005645 1.3e-25 121.7 132 46.2
BcaC04g23715 Brassica carinata HOM05D004696 ORTHO05D005645 2.2e-25 120.9 146 43.2
PSO832G1751 Papaver somniferum HOM05D004696 ORTHO05D005645 3.8e-25 120.2 145 43.4
AT1G54770 Arabidopsis thaliana HOM05D004696 ORTHO05D005645 8.4e-25 119.0 140 45.0
MCO05G434 Micromonas commoda HOM05D004696 ORTHO05D005645 2.1e-23 114.4 151 43.0
A09p05040 Brassica napus HOM05D004696 ORTHO05D005645 4.6e-23 113.2 146 42.5
BraA09t36143Z Brassica rapa HOM05D004696 ORTHO05D005645 4.6e-23 113.2 146 42.5
Aa31LG2G12130 Aethionema arabicum HOM05D004696 ORTHO05D005645 1.0e-22 112.1 140 44.3
C09p05450 Brassica napus HOM05D004696 ORTHO05D005645 1.3e-22 111.7 146 41.8
SHI04008 Sapria himalayana HOM05D004696 ORTHO05D005645 2.3e-22 110.9 95 54.7
BolC9t53474H Brassica oleracea HOM05D004696 ORTHO05D005645 3.9e-22 110.2 146 41.1
Thhalv10005420m.g Eutrema salsugineum HOM05D004696 ORTHO05D005645 1.9e-21 107.8 141 40.4
PRCOL_00000839 Prasinoderma coloniale HOM05D004696 ORTHO05D005645 7.4e-21 105.9 101 53.5
Oeu037627.2 Olea europaea HOM05D004696 ORTHO05D005645 1.4e-19 101.7 254 29.1
Peaxi162Scf00164g00414 Petunia axillaris HOM05D004696 ORTHO05D005645 2.4e-19 100.9 149 38.3
Cre03.g194150 Chlamydomonas reinhardtii HOM05D004696 ORTHO05D005645 3.1e-19 100.5 155 36.8
Rhsim04G0248200 Rhododendron simsii HOM05D004696 ORTHO05D005645 3.1e-19 100.5 142 37.3
Nitab4.5_0008086g0030 Nicotiana tabacum HOM05D004696 ORTHO05D005645 4.1e-19 100.1 160 38.1
ECA149G0001 Erigeron canadensis HOM05D004696 ORTHO05D005645 1.5e-18 98.2 97 48.5
Lj6C700T16 Lonicera japonica HOM05D004696 ORTHO05D005645 1.5e-18 98.2 132 39.4
SGA_v2.0_scaffold69G23291 Striga asiatica HOM05D004696 ORTHO05D005645 1.3e-17 95.1 145 36.6
ClCG06G002080 Citrullus lanatus HOM05D004696 ORTHO05D005645 1.7e-17 94.7 152 34.2
arahy.Tifrunner.gnm1.ann1.09FGJA Arachis hypogaea HOM05D004696 ORTHO05D005645 5.0e-17 93.2 142 36.6
Lj4g0014561 Lotus japonicus HOM05D004696 ORTHO05D005645 8.5e-17 92.4 87 47.1
Ca_06214_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 1.1e-16 92.0 165 34.5
Hma1.2p1_2234F.1_g317690 Hydrangea macrophylla HOM05D004696 ORTHO05D000003 1.1e-16 92.0 202 29.7
Ca_05928_v3 Cicer arietinum L. HOM05D004696 ORTHO05D005645 1.4e-16 91.7 165 34.5
Lj4g0016234 Lotus japonicus HOM05D004696 ORTHO05D005645 9.4e-16 89.0 83 47.0
Zm00001eb253530 Zea mays HOM05D004696 ORTHO05D005645 7.9e-15 85.9 93 46.2
ATR1127G170 Amborella trichopoda HOM05D004696 ORTHO05D005645 8.8e-14 82.4 81 49.4
Nn3g16891 Nelumbo nucifera HOM05D004696 ORTHO05D005645 2.0e-13 81.3 86 44.2
MELO3C035238.2 Cucumis melo HOM05D004696 ORTHO05D005645 5.7e-13 79.7 128 35.2
Actinidia01063 Actinidia chinensis HOM05D004696 ORTHO05D005645 9.7e-13 79.0 142 31.7
Lj2g0009432 Lotus japonicus HOM05D004696 ORTHO05D005645 2.8e-12 77.4 63 52.4
Nitab4.5_0000745g0120 Nicotiana tabacum HOM05D004696 ORTHO05D005645 1.1e-11 75.5 142 34.5
HPP92_006011 Vanilla planifolia HOM05D004696 ORTHO05D005645 1.8e-11 74.7 71 46.5
COL.COLO4_34519 Corchorus olitorius HOM05D004696 ORTHO05D005645 1.0e-09 68.9 105 35.2
Zm00001eb026470 Zea mays HOM05D004696 ORTHO05D021106 5.0e-09 66.6 65 47.7
BolC9t57816H Brassica oleracea HOM05D004696 ORTHO05D005645 4.2e-08 63.5 79 43.0
BcaC04g19932 Brassica carinata HOM05D004696 ORTHO05D005645 1.2e-07 62.0 79 43.0
Zm00001eb219180 Zea mays HOM05D004696 ORTHO05D005645 1.2e-07 62.0 65 46.2
Aqoxy5G04095 Aquilegia oxysepala HOM05D004696 ORTHO05D005645 4.7e-07 60.1 51 51.0
RcHm_v2.0_Chr4g0427481 Rosa chinensis HOM05D004696 ORTHO05D005645 2.3e-06 57.8 50 50.0
TAR371G0358 Trochodendron aralioides HOM05D004696 ORTHO05D005645 3.0e-06 57.4 90 35.6


User provided reference genes

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