Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g40647 Chara braunii HOM05D007381 ORTHO05D009496 9.8e-201 704.1 653 100.0
CBR_g29716 Chara braunii HOM05D007381 ORTHO05D009496 8.9e-85 318.9 193 92.7
AagrBONN_evm.TU.Sc2ySwM_362.1621 Anthoceros agrestis HOM05D007381 ORTHO05D009496 3.2e-66 257.3 564 31.4
Pp3c18_1320 Physcomitrium patens HOM05D007381 ORTHO05D009496 1.2e-65 255.4 564 30.7
Zm00001eb108230 Zea mays HOM05D007381 ORTHO05D009496 2.5e-63 247.7 563 30.6
Mapoly0084s0082 Marchantia polymorpha HOM05D007381 ORTHO05D009496 6.2e-62 243.0 565 29.6
Os07g0588800 Oryza sativa ssp. japonica HOM05D007381 ORTHO05D009496 6.2e-62 243.0 564 30.1
ATR0019G019 Amborella trichopoda HOM05D007381 ORTHO05D009496 8.1e-62 242.7 564 30.1
PGR102G2572 Punica granatum HOM05D007381 ORTHO05D009496 1.1e-61 242.3 567 29.8
CDE07G0114 Ceratophyllum demersum HOM05D007381 ORTHO05D009496 7.6e-60 236.1 567 28.9
Atru.chr3.157 Acer truncatum HOM05D007381 ORTHO05D009496 1.3e-59 235.3 565 29.6
Atru.chr3.186 Acer truncatum HOM05D007381 ORTHO05D009496 1.3e-59 235.3 565 29.6
SEGI_03968 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 2.2e-59 234.6 564 29.1
Gohir.D10G098200 Gossypium hirsutum HOM05D007381 ORTHO05D009496 6.4e-59 233.0 567 29.6
Cpa.g.sc6.38 Carica papaya HOM05D007381 ORTHO05D009496 1.1e-58 232.3 565 29.6
Gorai.011G107900 Gossypium raimondii HOM05D007381 ORTHO05D009496 1.1e-58 232.3 567 29.6
Eucgr.H02297 Eucalyptus grandis HOM05D007381 ORTHO05D009496 1.9e-58 231.5 567 29.1
PGSC0003DMG400024934 Solanum tuberosum HOM05D007381 ORTHO05D009496 3.2e-58 230.7 567 29.5
TAR628G1049 Trochodendron aralioides HOM05D007381 ORTHO05D009496 3.2e-58 230.7 567 28.6
Gohir.A10G089900 Gossypium hirsutum HOM05D007381 ORTHO05D009496 5.4e-58 229.9 567 29.5
HanXRQChr12g0373171 Helianthus annuus HOM05D007381 ORTHO05D009496 5.4e-58 229.9 567 28.7
Sed0015462 Sechium edule HOM05D007381 ORTHO05D009496 5.4e-58 229.9 565 29.2
Migut.H00360 Erythranthe guttata HOM05D007381 ORTHO05D009496 9.3e-58 229.2 567 29.1
Lj2g0010288 Lotus japonicus HOM05D007381 ORTHO05D009496 9.3e-58 229.2 565 29.6
COL.COLO4_11553 Corchorus olitorius HOM05D007381 ORTHO05D009496 1.6e-57 228.4 567 29.1
Peaxi162Scf00264g00118 Petunia axillaris HOM05D007381 ORTHO05D009496 1.6e-57 228.4 567 29.6
Solyc02g092510.3 Solanum lycopersicum HOM05D007381 ORTHO05D009496 1.6e-57 228.4 567 29.3
Sopen02g037070 Solanum pennellii HOM05D007381 ORTHO05D009496 1.6e-57 228.4 567 29.3
Aqoxy5G00892 Aquilegia oxysepala HOM05D007381 ORTHO05D009496 2.7e-57 227.6 567 28.4
Actinidia16435 Actinidia chinensis HOM05D007381 ORTHO05D009496 3.5e-57 227.3 564 29.4
VMungo1215G2498 Vigna mungo HOM05D007381 ORTHO05D009496 3.5e-57 227.3 567 30.0
Nn1g04598 Nelumbo nucifera HOM05D007381 ORTHO05D009496 4.6e-57 226.9 567 28.6
Thecc.01G070300 Theobroma cacao HOM05D007381 ORTHO05D009496 6.0e-57 226.5 567 28.7
Dinv26914 Davidia involucrata HOM05D007381 ORTHO05D009496 1.0e-56 225.7 567 28.2
THA.LOC104819874 Tarenaya hassleriana HOM05D007381 ORTHO05D009496 1.0e-56 225.7 565 29.0
Dinv30077 Davidia involucrata HOM05D007381 ORTHO05D009496 1.7e-56 224.9 567 28.7
GSVIVG01000134001 Vitis vinifera HOM05D007381 ORTHO05D009496 1.7e-56 224.9 565 29.0
CAN.G1075.23 Capsicum annuum HOM05D007381 ORTHO05D009496 3.0e-56 224.2 567 28.9
PSO170G6067 Papaver somniferum HOM05D007381 ORTHO05D009496 3.9e-56 223.8 567 27.9
Aa31LG6G14440 Aethionema arabicum HOM05D007381 ORTHO05D009496 6.6e-56 223.0 567 28.6
MELO3C007622.2 Cucumis melo HOM05D007381 ORTHO05D009496 6.6e-56 223.0 568 28.7
Rhsim08G0094800 Rhododendron simsii HOM05D007381 ORTHO05D009496 8.7e-56 222.6 565 29.2
SEGI_30700 Sequoiadendron giganteum HOM05D007381 ORTHO05D009496 1.1e-55 222.2 197 58.4
arahy.Tifrunner.gnm1.ann1.S5EEEI Arachis hypogaea HOM05D007381 ORTHO05D009496 1.5e-55 221.9 567 29.5
RcHm_v2.0_Chr2g0107591 Rosa chinensis HOM05D007381 ORTHO05D009496 1.5e-55 221.9 565 29.4
arahy.Tifrunner.gnm1.ann1.I4PWFV Arachis hypogaea HOM05D007381 ORTHO05D009496 1.9e-55 221.5 567 29.5
CSS0029250 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 1.9e-55 221.5 565 28.8
MD15G1294900 Malus domestica HOM05D007381 ORTHO05D009496 1.9e-55 221.5 565 28.8
CsaV3_6G043990 Cucumis sativus L. HOM05D007381 ORTHO05D009496 2.5e-55 221.1 565 28.7
Lsat_1_v5_gn_4_160940 Lactuca sativa HOM05D007381 ORTHO05D009496 2.5e-55 221.1 567 28.0
FvH4_1g17400 Fragaria vesca HOM05D007381 ORTHO05D009496 3.3e-55 220.7 565 29.4
SMO268G0024 Selaginella moellendorffii HOM05D007381 ORTHO05D009496 3.3e-55 220.7 528 29.2
TPR.G20964 Trifolium pratense HOM05D007381 ORTHO05D009496 3.3e-55 220.7 565 29.2
CSS0037700 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 4.3e-55 220.3 565 28.7
ECA232G2614 Erigeron canadensis HOM05D007381 ORTHO05D009496 5.6e-55 219.9 543 28.5
FAN23G1987 Fragaria x ananassa HOM05D007381 ORTHO05D009496 5.6e-55 219.9 565 29.2
Cc07_g06930 Coffea canephora HOM05D007381 ORTHO05D009496 7.3e-55 219.5 565 28.0
MD00G1015500 Malus domestica HOM05D007381 ORTHO05D009496 7.3e-55 219.5 565 28.7
Phvul.002G012100 Phaseolus vulgaris HOM05D007381 ORTHO05D009496 1.6e-54 218.4 565 29.6
unitig_899.g14582 Utricularia gibba HOM05D007381 ORTHO05D009496 1.6e-54 218.4 567 29.1
Medtr5g015840 Medicago truncatula HOM05D007381 ORTHO05D009496 6.2e-54 216.5 565 28.7
TWI73G0080 Tripterygium wilfordii HOM05D007381 ORTHO05D009496 6.2e-54 216.5 197 57.4
Potri.007G053900 Populus trichocarpa HOM05D007381 ORTHO05D009496 1.4e-53 215.3 564 28.7
Prupe.6G222900 Prunus persica HOM05D007381 ORTHO05D009496 1.4e-53 215.3 565 28.5
CANSAT01G2210 Cannabis sativa HOM05D007381 ORTHO05D009496 1.8e-53 214.9 565 28.5
Ca_24708_v3 Cicer arietinum L. HOM05D007381 ORTHO05D009496 2.4e-53 214.5 565 28.7
Glyma.11G048900 Glycine max HOM05D007381 ORTHO05D009496 4.0e-53 213.8 564 29.3
Lalb_Chr05g0213621 Lupinus albus HOM05D007381 ORTHO05D009496 6.9e-53 213.0 565 28.5
Glyma.01G192900 Glycine max HOM05D007381 ORTHO05D009496 2.6e-52 211.1 565 28.8
Hma1.2p1_0730F.1_g209840 Hydrangea macrophylla HOM05D007381 ORTHO05D009496 3.4e-52 210.7 196 56.1
FAN19G2977 Fragaria x ananassa HOM05D007381 ORTHO05D009496 4.4e-52 210.3 581 28.6
Lalb_Chr16g0378811 Lupinus albus HOM05D007381 ORTHO05D009496 4.4e-52 210.3 565 28.1
Ciclev10025991m.g Citrus clementina HOM05D007381 ORTHO05D009496 9.9e-52 209.1 197 56.9
Manes.12G110400 Manihot esculenta HOM05D007381 ORTHO05D009496 1.3e-51 208.8 567 28.4
vmacro17999 Vaccinium macrocarpon HOM05D007381 ORTHO05D009496 1.3e-51 208.8 197 55.3
EL10Ac6g15638 Beta vulgaris HOM05D007381 ORTHO05D009496 2.9e-51 207.6 567 27.0
DCAR_021466 Daucus carota HOM05D007381 ORTHO05D009496 3.8e-51 207.2 197 55.3
Cre07.g344150 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D009496 6.4e-51 206.5 202 55.9
ClCG01G017450 Citrullus lanatus HOM05D007381 ORTHO05D009496 6.4e-51 206.5 197 54.3
Oeu040581.2 Olea europaea HOM05D007381 ORTHO05D009496 6.4e-51 206.5 197 54.8
Lj4A160G63 Lonicera japonica HOM05D007381 ORTHO05D009496 2.4e-50 204.5 589 27.2
SGA_v2.0_scaffold15G07431 Striga asiatica HOM05D007381 ORTHO05D009496 1.6e-49 201.8 530 27.9
CiPaw.01G006100 Carya illinoinensis HOM05D007381 ORTHO05D009496 2.1e-49 201.4 197 55.3
Nitab4.5_0000651g0120 Nicotiana tabacum HOM05D007381 ORTHO05D009496 6.6e-48 196.4 531 27.7
FAN28G2520 Fragaria x ananassa HOM05D007381 ORTHO05D009496 1.1e-47 195.7 528 28.0
FAN26G1164 Fragaria x ananassa HOM05D007381 ORTHO05D009496 9.6e-47 192.6 526 27.9
Nitab4.5_0006069g0020 Nicotiana tabacum HOM05D007381 ORTHO05D009496 9.6e-47 192.6 549 27.5
Cfa004113 Carpinus fangiana HOM05D007381 ORTHO05D009496 8.1e-46 189.5 525 27.2
Haze_15300 Corylus avellana HOM05D007381 ORTHO05D009496 2.4e-42 177.9 157 56.7
PRCOL_00002255 Prasinoderma coloniale HOM05D007381 ORTHO05D009496 1.6e-41 175.3 205 47.3
Sabra07G0047100 Salix brachista HOM05D007381 ORTHO05D009496 2.1e-41 174.9 176 54.5
MCO12G353 Micromonas commoda HOM05D007381 ORTHO05D009496 6.0e-41 173.3 220 45.9
Hund13939 Selenicereus undatus HOM05D007381 ORTHO05D009496 1.9e-39 168.3 148 58.1
ATR0019G012 Amborella trichopoda HOM05D007381 ORTHO05D009496 3.7e-38 164.1 155 57.4
Duzib187G0033 Durio zibethinus HOM05D007381 ORTHO05D009496 9.0e-37 159.5 153 52.9
CSS0032842 Camellia sinensis var. sinensis HOM05D007381 ORTHO05D009496 8.2e-30 136.3 158 50.0
HPP92_026572 Vanilla planifolia HOM05D007381 ORTHO05D009496 1.1e-26 125.9 114 49.1
QL06p039803 Quercus lobata HOM05D007381 ORTHO05D009496 1.1e-23 115.9 112 46.4
Cfa025505 Carpinus fangiana HOM05D007381 ORTHO05D009496 9.4e-18 96.3 141 38.3
SHI33146 Sapria himalayana HOM05D007381 ORTHO05D009496 2.8e-14 84.7 73 49.3
Ca_17124_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.9e-10 72.0 99 43.4
Ca_08895_v3 Cicer arietinum L. HOM05D002459 ORTHO05D003006 1.5e-07 62.4 72 44.4
Cre06.g298950 Chlamydomonas reinhardtii HOM05D007381 ORTHO05D143024 1.7e-06 58.9 157 31.8


User provided reference genes

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