Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g40635 Chara braunii HOM05D001348 ORTHO05D008393 1.6e-256 889.0 482 100.0
Mapoly0160s0012 Marchantia polymorpha HOM05D001348 ORTHO05D008393 2.7e-22 110.9 480 26.2
Manes.03G133300 Manihot esculenta HOM05D001348 ORTHO05D008393 2.3e-21 107.8 105 50.5
Cpa.g.sc12.269 Carica papaya HOM05D001348 ORTHO05D008393 1.6e-19 101.7 84 53.6
Thecc.07G031600 Theobroma cacao HOM05D001348 ORTHO05D008393 3.7e-19 100.5 84 48.8
unitig_747.g21692 Utricularia gibba HOM05D001348 ORTHO05D008393 4.8e-19 100.1 84 50.0
Lalb_Chr15g0081511 Lupinus albus HOM05D001348 ORTHO05D008393 6.2e-19 99.8 172 36.6
FvH4_3g23220 Fragaria vesca HOM05D001348 ORTHO05D008393 8.2e-19 99.4 84 48.8
FAN16G1777 Fragaria x ananassa HOM05D001348 ORTHO05D008393 8.2e-19 99.4 84 48.8
FAN21G3120 Fragaria x ananassa HOM05D001348 ORTHO05D008393 8.2e-19 99.4 84 48.8
FAN25G0826 Fragaria x ananassa HOM05D001348 ORTHO05D008393 1.1e-18 99.0 84 48.8
Prupe.4G219000 Prunus persica HOM05D001348 ORTHO05D008393 1.1e-18 99.0 105 44.8
Aa31LG8G7250 Aethionema arabicum HOM05D001348 ORTHO05D008393 1.4e-18 98.6 105 44.8
Potri.001G359200 Populus trichocarpa HOM05D001348 ORTHO05D008393 1.4e-18 98.6 84 48.8
CsaV3_7G021990 Cucumis sativus L. HOM05D001348 ORTHO05D008393 1.8e-18 98.2 84 47.6
Duzib213G0150 Durio zibethinus HOM05D001348 ORTHO05D008393 2.4e-18 97.8 84 47.6
Nn1g07231 Nelumbo nucifera HOM05D001348 ORTHO05D008393 2.4e-18 97.8 84 52.4
RcHm_v2.0_Chr5g0040901 Rosa chinensis HOM05D001348 ORTHO05D008393 2.4e-18 97.8 84 48.8
Dinv40782 Davidia involucrata HOM05D001348 ORTHO05D008393 3.1e-18 97.4 84 50.0
MD11G1212700 Malus domestica HOM05D001348 ORTHO05D008393 3.1e-18 97.4 84 47.6
Ca_26139_v3 Cicer arietinum L. HOM05D001348 ORTHO05D008393 5.3e-18 96.7 157 36.3
Os06g0367100 Oryza sativa ssp. japonica HOM05D001348 ORTHO05D008393 5.3e-18 96.7 84 53.6
AUR62015829 Chenopodium quinoa HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 50.0
AUR62020390 Chenopodium quinoa HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 50.0
Haze_09716 Corylus avellana HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 47.6
Eucgr.F03487 Eucalyptus grandis HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 50.0
Gohir.A04G012800 Gossypium hirsutum HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 47.6
Gohir.D05G373100 Gossypium hirsutum HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 47.6
Gorai.009G441800 Gossypium raimondii HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 47.6
MBI10_g29397_MAGBIO Magnolia biondii HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 51.2
Hund02021 Selenicereus undatus HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 48.8
Solyc07g064830.3 Solanum lycopersicum HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 51.2
Sopen07g033020 Solanum pennellii HOM05D001348 ORTHO05D008393 6.9e-18 96.3 84 51.2
Ah.04g166040 Amaranthus hybridus HOM05D001348 ORTHO05D008393 9.0e-18 95.9 84 48.8
ClCG09G010970 Citrullus lanatus HOM05D001348 ORTHO05D008393 9.0e-18 95.9 84 46.4
SGA_v2.0_scaffold363G49944 Striga asiatica HOM05D001348 ORTHO05D008393 9.0e-18 95.9 132 40.9
TAR624G0107 Trochodendron aralioides HOM05D001348 ORTHO05D008393 9.0e-18 95.9 84 51.2
MSTRG.14452 Avicennia marina HOM05D001348 ORTHO05D008393 1.2e-17 95.5 105 44.8
MELO3C013141.2 Cucumis melo HOM05D001348 ORTHO05D008393 1.2e-17 95.5 84 46.4
FAN25G0105 Fragaria x ananassa HOM05D001348 ORTHO05D008393 1.2e-17 95.5 82 48.8
Glyma.18G092600 Glycine max HOM05D001348 ORTHO05D008393 1.2e-17 95.5 169 36.1
Lj6g0019683 Lotus japonicus HOM05D001348 ORTHO05D008393 1.2e-17 95.5 157 35.7
TWI38G1719 Tripterygium wilfordii HOM05D001348 ORTHO05D008393 1.2e-17 95.5 84 51.2
vmacro09698 Vaccinium macrocarpon HOM05D001348 ORTHO05D008393 1.2e-17 95.5 84 50.0
HPP92_025429 Vanilla planifolia HOM05D001348 ORTHO05D008393 1.2e-17 95.5 84 47.6
CiPaw.11G192600 Carya illinoinensis HOM05D001348 ORTHO05D008393 1.5e-17 95.1 84 46.4
Thhalv10020019m.g Eutrema salsugineum HOM05D001348 ORTHO05D008393 1.5e-17 95.1 105 41.9
AT3G20440 Arabidopsis thaliana HOM05D001348 ORTHO05D008393 2.0e-17 94.7 105 41.9
EL10Ac4g07758 Beta vulgaris HOM05D001348 ORTHO05D008393 2.0e-17 94.7 84 50.0
BcaB06g26109 Brassica carinata HOM05D001348 ORTHO05D008393 2.0e-17 94.7 105 41.9
Migut.H01807 Erythranthe guttata HOM05D001348 ORTHO05D008393 2.0e-17 94.7 105 46.7
Pp3c1_1810 Physcomitrium patens HOM05D001348 ORTHO05D008393 2.0e-17 94.7 468 26.3
Sp3g18450 Schrenkiella parvula HOM05D001348 ORTHO05D008393 2.0e-17 94.7 105 41.9
GSVIVG01037695001 Vitis vinifera HOM05D001348 ORTHO05D008393 2.0e-17 94.7 84 48.8
AL219U10030 Arabidopsis lyrata HOM05D001348 ORTHO05D008393 2.6e-17 94.4 105 41.9
AL3G34160 Arabidopsis lyrata HOM05D001348 ORTHO05D008393 2.6e-17 94.4 105 41.9
arahy.Tifrunner.gnm1.ann1.IC3HGI Arachis hypogaea HOM05D001348 ORTHO05D008393 2.6e-17 94.4 84 45.2
arahy.Tifrunner.gnm1.ann1.QR17ZP Arachis hypogaea HOM05D001348 ORTHO05D008393 2.6e-17 94.4 84 45.2
Carub.0003s2038 Capsella rubella HOM05D001348 ORTHO05D008393 2.6e-17 94.4 105 41.9
Psat5g173680 Pisum sativum HOM05D001348 ORTHO05D008393 2.6e-17 94.4 84 45.2
PGR031G0282 Punica granatum HOM05D001348 ORTHO05D008393 2.6e-17 94.4 84 45.2
Phvul.006G047000 Phaseolus vulgaris HOM05D001348 ORTHO05D008393 3.4e-17 94.0 169 36.1
TPR.G14440 Trifolium pratense HOM05D001348 ORTHO05D008393 3.4e-17 94.0 157 35.7
Actinidia10744 Actinidia chinensis HOM05D001348 ORTHO05D008393 4.5e-17 93.6 84 46.4
ATR0712G161 Amborella trichopoda HOM05D001348 ORTHO05D008393 4.5e-17 93.6 84 50.0
PSO478G3826 Papaver somniferum HOM05D001348 ORTHO05D008393 4.5e-17 93.6 118 42.4
QL08p008747 Quercus lobata HOM05D001348 ORTHO05D008393 4.5e-17 93.6 84 45.2
QL09p024307 Quercus lobata HOM05D001348 ORTHO05D008393 4.5e-17 93.6 84 45.2
Zm00001eb357830 Zea mays HOM05D001348 ORTHO05D008393 4.5e-17 93.6 84 51.2
CARHR096150 Cardamine hirsuta HOM05D001348 ORTHO05D008393 5.8e-17 93.2 105 41.0
Ciclev10007401m.g Citrus clementina HOM05D001348 ORTHO05D008393 5.8e-17 93.2 84 48.8
Cc05_g14070 Coffea canephora HOM05D001348 ORTHO05D008393 5.8e-17 93.2 84 46.4
HanXRQChr03g0076721 Helianthus annuus HOM05D001348 ORTHO05D008393 5.8e-17 93.2 130 38.5
Medtr3g053220 Medicago truncatula HOM05D001348 ORTHO05D008393 5.8e-17 93.2 157 35.7
Nitab4.5_0008150g0010 Nicotiana tabacum HOM05D001348 ORTHO05D008393 5.8e-17 93.2 84 46.4
Peaxi162Scf00235g00519 Petunia axillaris HOM05D001348 ORTHO05D008393 5.8e-17 93.2 84 48.8
Aqoxy1G03056 Aquilegia oxysepala HOM05D001348 ORTHO05D008393 7.6e-17 92.8 84 46.4
Sed0016477 Sechium edule HOM05D001348 ORTHO05D008393 1.0e-16 92.4 84 46.4
CANSAT78G2496 Cannabis sativa HOM05D001348 ORTHO05D008393 1.3e-16 92.0 84 46.4
CDE04G2814 Ceratophyllum demersum HOM05D001348 ORTHO05D008393 1.3e-16 92.0 105 43.8
BcaC05g28331 Brassica carinata HOM05D001348 ORTHO05D008393 1.7e-16 91.7 105 40.0
A05p28460 Brassica napus HOM05D001348 ORTHO05D008393 1.7e-16 91.7 105 40.0
C05p43900 Brassica napus HOM05D001348 ORTHO05D008393 1.7e-16 91.7 105 40.0
BolC5t33106H Brassica oleracea HOM05D001348 ORTHO05D008393 1.7e-16 91.7 105 40.0
BraA05t21725Z Brassica rapa HOM05D001348 ORTHO05D008393 1.7e-16 91.7 105 40.0
COL.COLO4_09699 Corchorus olitorius HOM05D001348 ORTHO05D008393 2.2e-16 91.3 82 46.3
RhsimUnG0248600 Rhododendron simsii HOM05D001348 ORTHO05D008393 2.2e-16 91.3 92 44.6
THA.LOC104817860 Tarenaya hassleriana HOM05D001348 ORTHO05D008393 2.2e-16 91.3 84 44.0
CSS0015657 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 6.5e-16 89.7 84 46.4
CSS0031743 Camellia sinensis var. sinensis HOM05D001348 ORTHO05D008393 6.5e-16 89.7 84 46.4
SMO361G0691 Selaginella moellendorffii HOM05D001348 ORTHO05D008393 1.1e-15 89.0 465 25.6
DCAR_016718 Daucus carota HOM05D001348 ORTHO05D008393 1.9e-15 88.2 465 24.1
ECA240G2960 Erigeron canadensis HOM05D001348 ORTHO05D008393 2.5e-15 87.8 465 23.9
VMungo0540G0045 Vigna mungo HOM05D001348 ORTHO05D008393 2.5e-15 87.8 84 44.0
Lsat_1_v5_gn_9_92360 Lactuca sativa HOM05D001348 ORTHO05D008393 3.2e-15 87.4 133 36.8
Nitab4.5_0000328g0120 Nicotiana tabacum HOM05D001348 ORTHO05D008393 5.5e-15 86.7 90 43.3
AagrBONN_evm.TU.Sc2ySwM_368.3367 Anthoceros agrestis HOM05D001348 ORTHO05D008393 9.3e-15 85.9 467 22.3
DCAR_031790 Daucus carota HOM05D001348 ORTHO05D008393 6.3e-11 73.2 60 58.3
SEGI_09228 Sequoiadendron giganteum HOM05D001348 ORTHO05D008393 1.8e-10 71.6 49 61.2
SEGI_15925 Sequoiadendron giganteum HOM05D001348 ORTHO05D008393 1.8e-10 71.6 49 61.2
Lj1C878T2 Lonicera japonica HOM05D001348 ORTHO05D008393 4.1e-10 70.5 121 37.2
CAN.G337.70 Capsicum annuum HOM05D001348 ORTHO05D008393 5.3e-10 70.1 68 45.6
Cc05_g15390 Coffea canephora HOM05D001348 ORTHO05D008393 1.3e-08 65.5 88 40.9
Sc16g0005840 Simmondsia chinensis HOM05D001348 ORTHO05D008393 2.9e-08 64.3 122 36.9


User provided reference genes

Program Settings