Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4059 Chara braunii HOM05D004896 ORTHO05D006447 5.9e-189 664.1 340 100.0
Pp3c2_19250 Physcomitrium patens HOM05D004896 ORTHO05D006447 3.8e-63 246.1 249 50.6
Mapoly0004s0068 Marchantia polymorpha HOM05D004896 ORTHO05D006447 1.9e-62 243.8 261 49.4
SMO200G0187 Selaginella moellendorffii HOM05D004896 ORTHO05D006447 1.8e-57 227.3 216 50.0
AagrBONN_evm.TU.Sc2ySwM_362.2811 Anthoceros agrestis HOM05D004896 ORTHO05D006447 2.0e-56 223.8 305 44.3
arahy.Tifrunner.gnm1.ann1.10VWGS Arachis hypogaea HOM05D004896 ORTHO05D006447 9.4e-54 214.9 247 45.3
arahy.Tifrunner.gnm1.ann1.5ILH08 Arachis hypogaea HOM05D004896 ORTHO05D006447 9.4e-54 214.9 247 45.3
Eucgr.I01701 Eucalyptus grandis HOM05D004896 ORTHO05D006447 1.2e-53 214.5 227 47.6
Cpa.g.sc130.54 Carica papaya HOM05D004896 ORTHO05D006447 2.7e-53 213.4 227 48.0
Thecc.04G026600 Theobroma cacao HOM05D004896 ORTHO05D006447 2.3e-52 210.3 247 45.7
CSS0017957 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 5.2e-52 209.1 247 44.5
FAN02G3298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 5.2e-52 209.1 284 41.9
Medtr0018s0290 Medicago truncatula HOM05D004896 ORTHO05D006447 5.2e-52 209.1 302 41.4
Nn5g27187 Nelumbo nucifera HOM05D004896 ORTHO05D006447 5.2e-52 209.1 247 44.1
Ca_03861_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 6.7e-52 208.8 227 46.3
GSVIVG01003974001 Vitis vinifera HOM05D004896 ORTHO05D006447 6.7e-52 208.8 227 46.7
Ca_01399_v3 Cicer arietinum L. HOM05D004896 ORTHO05D006447 1.1e-51 208.0 227 46.3
Cc07_g00300 Coffea canephora HOM05D004896 ORTHO05D006447 1.5e-51 207.6 220 47.3
MSTRG.3120 Avicennia marina HOM05D004896 ORTHO05D006447 2.0e-51 207.2 247 44.1
Lj7A604T65 Lonicera japonica HOM05D004896 ORTHO05D006447 2.0e-51 207.2 272 42.3
Nitab4.5_0001031g0180 Nicotiana tabacum HOM05D004896 ORTHO05D006447 3.3e-51 206.5 247 44.5
Duzib264G0232 Durio zibethinus HOM05D004896 ORTHO05D006447 4.4e-51 206.1 344 37.2
MBI19_g04325_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 4.4e-51 206.1 227 45.4
Prupe.3G298100 Prunus persica HOM05D004896 ORTHO05D006447 5.7e-51 205.7 220 47.3
FvH4_6g52290 Fragaria vesca HOM05D004896 ORTHO05D006447 7.5e-51 205.3 266 42.1
FAN09G1675 Fragaria x ananassa HOM05D004896 ORTHO05D006447 7.5e-51 205.3 220 47.7
Manes.15G155100 Manihot esculenta HOM05D004896 ORTHO05D006447 7.5e-51 205.3 314 38.9
SGA_v2.0_scaffold135G34930 Striga asiatica HOM05D004896 ORTHO05D006447 7.5e-51 205.3 220 48.2
FAN14G4168 Fragaria x ananassa HOM05D004896 ORTHO05D006447 9.7e-51 204.9 266 42.1
Gohir.A05G342400 Gossypium hirsutum HOM05D004896 ORTHO05D006447 9.7e-51 204.9 314 40.1
QL02p073334 Quercus lobata HOM05D004896 ORTHO05D006447 9.7e-51 204.9 220 47.3
PGR142G1575 Punica granatum HOM05D004896 ORTHO05D006447 1.3e-50 204.5 220 47.3
TAR629G1306 Trochodendron aralioides HOM05D004896 ORTHO05D006447 1.3e-50 204.5 227 45.4
RcHm_v2.0_Chr2g0173821 Rosa chinensis HOM05D004896 ORTHO05D006447 1.7e-50 204.1 308 39.6
Hund14985 Selenicereus undatus HOM05D004896 ORTHO05D006447 1.7e-50 204.1 220 48.2
COL.COLO4_29242 Corchorus olitorius HOM05D004896 ORTHO05D006447 2.2e-50 203.8 247 43.7
Gorai.012G091200 Gossypium raimondii HOM05D004896 ORTHO05D006447 2.2e-50 203.8 321 39.6
TPR.G1112 Trifolium pratense HOM05D004896 ORTHO05D006447 2.2e-50 203.8 227 45.8
FAN05G4015 Fragaria x ananassa HOM05D004896 ORTHO05D006447 2.8e-50 203.4 298 40.6
Potri.001G338200 Populus trichocarpa HOM05D004896 ORTHO05D006447 3.7e-50 203.0 323 37.5
Solyc02g093690.3 Solanum lycopersicum HOM05D004896 ORTHO05D006447 3.7e-50 203.0 248 44.0
Cfa007299 Carpinus fangiana HOM05D004896 ORTHO05D006447 4.8e-50 202.6 306 38.9
Hma1.2p1_1484F.1_g286400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 4.8e-50 202.6 298 39.3
Nitab4.5_0002158g0160 Nicotiana tabacum HOM05D004896 ORTHO05D006447 4.8e-50 202.6 346 37.6
HPP92_026167 Vanilla planifolia HOM05D004896 ORTHO05D006447 4.8e-50 202.6 218 45.0
HanXRQChr17g0549471 Helianthus annuus HOM05D004896 ORTHO05D006447 6.3e-50 202.2 220 46.8
Hma1.2p1_0383F.1_g140290 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 8.2e-50 201.8 220 46.4
Rhsim08G0046600 Rhododendron simsii HOM05D004896 ORTHO05D006447 8.2e-50 201.8 284 40.5
Actinidia18427 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.1e-49 201.4 247 44.1
AUR62036338 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.1e-49 201.4 247 42.9
Hma1.2p1_1407F.1_g281400 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 1.1e-49 201.4 227 45.4
CAN.G473.48 Capsicum annuum HOM05D004896 ORTHO05D006447 1.4e-49 201.1 314 40.8
VMungo1080G0372 Vigna mungo HOM05D004896 ORTHO05D006447 1.4e-49 201.1 228 44.3
Aqoxy1G02023 Aquilegia oxysepala HOM05D004896 ORTHO05D006447 1.8e-49 200.7 245 42.0
EL10Ac5g10496 Beta vulgaris HOM05D004896 ORTHO05D006447 1.8e-49 200.7 301 39.5
Lj1g0027814 Lotus japonicus HOM05D004896 ORTHO05D006447 1.8e-49 200.7 304 39.1
Os07g0644000 Oryza sativa ssp. japonica HOM05D004896 ORTHO05D006447 1.8e-49 200.7 245 40.4
BcaB06g27542 Brassica carinata HOM05D004896 ORTHO05D006447 2.4e-49 200.3 247 43.3
AUR62030697 Chenopodium quinoa HOM05D004896 ORTHO05D006447 2.4e-49 200.3 247 42.5
ClCG05G013000 Citrullus lanatus HOM05D004896 ORTHO05D006447 2.4e-49 200.3 310 38.1
Phvul.008G145713 Phaseolus vulgaris HOM05D004896 ORTHO05D006447 2.4e-49 200.3 248 42.3
vmacro18309 Vaccinium macrocarpon HOM05D004896 ORTHO05D006447 2.4e-49 200.3 227 45.4
C04p47490 Brassica napus HOM05D004896 ORTHO05D006447 3.1e-49 199.9 247 43.3
BolC4t26350H Brassica oleracea HOM05D004896 ORTHO05D006447 3.1e-49 199.9 247 43.3
CANSAT64G0177 Cannabis sativa HOM05D004896 ORTHO05D006447 3.1e-49 199.9 227 44.5
CsaV3_3G027540 Cucumis sativus L. HOM05D004896 ORTHO05D006447 3.1e-49 199.9 304 37.8
Psat3g168560 Pisum sativum HOM05D004896 ORTHO05D006447 3.1e-49 199.9 305 39.3
Glyma.16G066000 Glycine max HOM05D004896 ORTHO05D006447 4.1e-49 199.5 227 44.5
PGSC0003DMG400012644 Solanum tuberosum HOM05D004896 ORTHO05D006447 4.1e-49 199.5 356 37.1
HPP92_020467 Vanilla planifolia HOM05D004896 ORTHO05D006447 4.1e-49 199.5 317 37.9
ATR0099G063 Amborella trichopoda HOM05D004896 ORTHO05D006447 5.3e-49 199.1 227 44.5
Ciclev10015882m.g Citrus clementina HOM05D004896 ORTHO05D006447 5.3e-49 199.1 247 40.5
PRCOL_00001693 Prasinoderma coloniale HOM05D004896 ORTHO05D006447 5.3e-49 199.1 263 43.7
SEGI_10618 Sequoiadendron giganteum HOM05D004896 ORTHO05D006447 5.3e-49 199.1 247 43.7
Sp7g01200 Schrenkiella parvula HOM05D004896 ORTHO05D006447 7.0e-49 198.7 247 42.9
Sopen02g038330 Solanum pennellii HOM05D004896 ORTHO05D006447 7.0e-49 198.7 356 37.1
Ah.12g059440 Amaranthus hybridus HOM05D004896 ORTHO05D006447 9.1e-49 198.4 283 41.3
Zm00001eb329190 Zea mays HOM05D004896 ORTHO05D006447 9.1e-49 198.4 277 39.4
EL10Ac9g21007 Beta vulgaris HOM05D004896 ORTHO05D006447 1.2e-48 198.0 301 39.5
DCAR_021752 Daucus carota HOM05D004896 ORTHO05D006447 1.2e-48 198.0 314 37.3
FvH4_6g52310 Fragaria vesca HOM05D004896 ORTHO05D006447 1.2e-48 198.0 220 46.4
CiPaw.04G032200 Carya illinoinensis HOM05D004896 ORTHO05D006447 1.6e-48 197.6 252 41.7
Sed0025595 Sechium edule HOM05D004896 ORTHO05D006447 1.6e-48 197.6 247 41.7
THA.LOC104825307 Tarenaya hassleriana HOM05D004896 ORTHO05D006447 1.6e-48 197.6 318 35.8
AL7G49080 Arabidopsis lyrata HOM05D004896 ORTHO05D006447 2.6e-48 196.8 247 42.1
TWI56G0223 Tripterygium wilfordii HOM05D004896 ORTHO05D006447 2.6e-48 196.8 220 45.9
Thhalv10027828m.g Eutrema salsugineum HOM05D004896 ORTHO05D006447 3.5e-48 196.4 247 42.5
Haze_14796 Corylus avellana HOM05D004896 ORTHO05D006447 4.5e-48 196.1 208 46.2
Lsat_1_v5_gn_0_30781 Lactuca sativa HOM05D004896 ORTHO05D006447 4.5e-48 196.1 220 45.0
A04p13700 Brassica napus HOM05D004896 ORTHO05D006447 7.7e-48 195.3 310 39.0
BraA04t17030Z Brassica rapa HOM05D004896 ORTHO05D006447 7.7e-48 195.3 310 39.0
CiPaw.03G049000 Carya illinoinensis HOM05D004896 ORTHO05D006447 7.7e-48 195.3 283 41.0
MD09G1019000 Malus domestica HOM05D004896 ORTHO05D006447 7.7e-48 195.3 298 37.6
CARHR261290 Cardamine hirsuta HOM05D004896 ORTHO05D006447 1.3e-47 194.5 247 41.3
Aa31LG9G960 Aethionema arabicum HOM05D004896 ORTHO05D006447 2.2e-47 193.7 247 40.9
ECA246G3787 Erigeron canadensis HOM05D004896 ORTHO05D006447 3.8e-47 193.0 247 42.1
Migut.H00045 Erythranthe guttata HOM05D004896 ORTHO05D006447 6.5e-47 192.2 322 37.3
Gohir.D04G080440 Gossypium hirsutum HOM05D004896 ORTHO05D006447 8.5e-47 191.8 300 39.7
MCO13G572 Micromonas commoda HOM05D004896 ORTHO05D006447 8.5e-47 191.8 252 42.9
PSO675G8471 Papaver somniferum HOM05D004896 ORTHO05D006447 2.5e-46 190.3 225 43.1
unitig_0.g536 Utricularia gibba HOM05D004896 ORTHO05D006447 3.2e-46 189.9 218 44.5
Carub.0007s3482 Capsella rubella HOM05D004896 ORTHO05D006447 4.2e-46 189.5 308 36.7
Lalb_Chr14g0362991 Lupinus albus HOM05D004896 ORTHO05D006447 5.5e-46 189.1 228 42.5
PSO541G0959 Papaver somniferum HOM05D004896 ORTHO05D006447 5.5e-46 189.1 225 42.7
AT5G40660 Arabidopsis thaliana HOM05D004896 ORTHO05D006447 7.2e-46 188.7 324 36.4
Dinv33394 Davidia involucrata HOM05D004896 ORTHO05D006447 7.2e-46 188.7 233 43.3
CSS0036459 Camellia sinensis var. sinensis HOM05D004896 ORTHO05D006447 8.0e-45 185.3 299 36.8
CDE07G0249 Ceratophyllum demersum HOM05D004896 ORTHO05D006447 5.2e-44 182.6 211 43.6
SHI03827 Sapria himalayana HOM05D004896 ORTHO05D006447 6.8e-44 182.2 288 36.8
Sabra16G0218900 Salix brachista HOM05D004896 ORTHO05D006447 1.1e-41 174.9 398 30.7
Peaxi162Scf00420g00251 Petunia axillaris HOM05D004896 ORTHO05D006447 4.5e-40 169.5 180 47.2
MELO3C014823.2 Cucumis melo HOM05D004896 ORTHO05D006447 1.9e-38 164.1 305 35.4
Cre17.g726250 Chlamydomonas reinhardtii HOM05D004896 ORTHO05D006447 4.2e-38 162.9 212 42.9
RcHm_v2.0_Chr2g0174241 Rosa chinensis HOM05D004896 ORTHO05D006447 9.4e-38 161.8 238 39.5
Atru.chr6.2473 Acer truncatum HOM05D004896 ORTHO05D006447 1.0e-36 158.3 195 42.1
Sc03g0007130 Simmondsia chinensis HOM05D004896 ORTHO05D006447 5.7e-35 152.5 249 37.3
Sed0012039 Sechium edule HOM05D004896 ORTHO05D006447 7.5e-35 152.1 184 42.4
Oeu064389.1 Olea europaea HOM05D004896 ORTHO05D006447 6.3e-34 149.1 248 36.7
FAN14G0298 Fragaria x ananassa HOM05D004896 ORTHO05D006447 1.8e-33 147.5 229 38.4
MD17G1019600 Malus domestica HOM05D004896 ORTHO05D006447 1.2e-29 134.8 214 36.4
SGA_v2.0_scaffold18G08247 Striga asiatica HOM05D004896 ORTHO05D006447 2.1e-29 134.0 243 35.0
EL10Ac5g11826 Beta vulgaris HOM05D004896 ORTHO05D006447 4.7e-29 132.9 149 47.0
Hma1.2p1_1484F.1_g286403 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.8e-27 125.2 126 46.8
Hma1.2p1_1484F.1_g286440 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 9.8e-27 125.2 126 46.8
Duzib147G0160 Durio zibethinus HOM05D004896 ORTHO05D006447 1.7e-26 124.4 124 47.6
Cc06_g20980 Coffea canephora HOM05D004896 ORTHO05D006447 1.2e-24 118.2 168 37.5
Atru.chr3.2666 Acer truncatum HOM05D004896 ORTHO05D006447 1.6e-21 107.8 215 30.7
MBI19_g02443_MAGBIO Magnolia biondii HOM05D004896 ORTHO05D006447 1.2e-16 91.7 89 47.2
Hma1.2p1_1484F.1_g286430 Hydrangea macrophylla HOM05D004896 ORTHO05D006447 2.0e-16 90.9 96 46.9
Actinidia16947 Actinidia chinensis HOM05D004896 ORTHO05D006447 1.6e-13 81.3 138 37.0
Atru.chr4.450 Acer truncatum HOM05D004896 ORTHO05D006447 2.1e-13 80.9 116 37.1
Glyma.19G080702 Glycine max HOM05D004896 ORTHO05D006447 2.8e-13 80.5 98 39.8
Nitab4.5_0002158g0260 Nicotiana tabacum HOM05D002474 ORTHO05D007142 2.8e-13 80.5 209 30.6
AUR62030692 Chenopodium quinoa HOM05D004896 ORTHO05D006447 1.4e-12 78.2 104 40.4


User provided reference genes

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