Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g40140 Chara braunii HOM05D006442 ORTHO05D007980 1.1e-133 479.9 229 100.0
TWI09G1159 Tripterygium wilfordii HOM05D006442 ORTHO05D007980 5.1e-27 125.6 136 49.3
Haze_03245 Corylus avellana HOM05D006442 ORTHO05D007980 4.3e-26 122.5 130 50.8
FvH4_7g00510 Fragaria vesca HOM05D006442 ORTHO05D007980 5.6e-26 122.1 130 50.0
FAN03G1462 Fragaria x ananassa HOM05D006442 ORTHO05D007980 5.6e-26 122.1 130 50.0
FAN06G2479 Fragaria x ananassa HOM05D006442 ORTHO05D007980 5.6e-26 122.1 130 50.0
FAN10G1890 Fragaria x ananassa HOM05D006442 ORTHO05D007980 5.6e-26 122.1 130 50.0
MD07G1004900 Malus domestica HOM05D006442 ORTHO05D007980 5.6e-26 122.1 120 52.5
PSO339G0425 Papaver somniferum HOM05D006442 ORTHO05D007980 7.3e-26 121.7 129 49.6
PSO384G2221 Papaver somniferum HOM05D006442 ORTHO05D007980 7.3e-26 121.7 129 49.6
Cfa010728 Carpinus fangiana HOM05D006442 ORTHO05D007980 9.5e-26 121.3 130 50.8
Cc02_g27340 Coffea canephora HOM05D006442 ORTHO05D007980 9.5e-26 121.3 130 49.2
Os06g0320000 Oryza sativa ssp. japonica HOM05D006442 ORTHO05D007980 9.5e-26 121.3 118 54.2
RcHm_v2.0_Chr1g0314301 Rosa chinensis HOM05D006442 ORTHO05D007980 9.5e-26 121.3 120 52.5
Hma1.2p1_0010F.1_g007050 Hydrangea macrophylla HOM05D006442 ORTHO05D007980 1.2e-25 120.9 131 49.6
PGR042G3140 Punica granatum HOM05D006442 ORTHO05D007980 1.6e-25 120.6 119 52.1
Actinidia21568 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.1e-25 120.2 116 53.4
VMungo1080G0583 Vigna mungo HOM05D006442 ORTHO05D007980 2.8e-25 119.8 138 47.8
Atru.chr11.2670 Acer truncatum HOM05D006442 ORTHO05D007980 3.6e-25 119.4 120 49.2
AT5G42850 Arabidopsis thaliana HOM05D006442 ORTHO05D007980 3.6e-25 119.4 102 54.9
CSS0031684 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 3.6e-25 119.4 120 50.8
Medtr3g027090 Medicago truncatula HOM05D006442 ORTHO05D007980 4.7e-25 119.0 131 47.3
Prupe.2G007200 Prunus persica HOM05D006442 ORTHO05D007980 6.2e-25 118.6 120 53.3
CARHR181310 Cardamine hirsuta HOM05D006442 ORTHO05D007980 8.1e-25 118.2 102 52.9
Cc02_g27370 Coffea canephora HOM05D006442 ORTHO05D007980 8.1e-25 118.2 130 48.5
Glyma.08G151500 Glycine max HOM05D006442 ORTHO05D007980 8.1e-25 118.2 130 49.2
CSS0016496 Camellia sinensis var. sinensis HOM05D006442 ORTHO05D007980 1.1e-24 117.9 106 55.7
Manes.10G148300 Manihot esculenta HOM05D006442 ORTHO05D007980 1.1e-24 117.9 109 54.1
AL8G18110 Arabidopsis lyrata HOM05D006442 ORTHO05D007980 1.8e-24 117.1 102 53.9
Duzib133G0004 Durio zibethinus HOM05D006442 ORTHO05D007980 1.8e-24 117.1 118 55.1
Thhalv10003289m.g Eutrema salsugineum HOM05D006442 ORTHO05D007980 1.8e-24 117.1 102 52.9
Nn7g36056 Nelumbo nucifera HOM05D006442 ORTHO05D007980 1.8e-24 117.1 117 52.1
Actinidia20688 Actinidia chinensis HOM05D006442 ORTHO05D007980 2.3e-24 116.7 115 53.0
Carub.0008s0607 Capsella rubella HOM05D006442 ORTHO05D007980 2.3e-24 116.7 102 52.9
Ciclev10033058m.g Citrus clementina HOM05D006442 ORTHO05D007980 2.3e-24 116.7 110 52.7
Eucgr.G03402 Eucalyptus grandis HOM05D006442 ORTHO05D007980 2.3e-24 116.7 130 48.5
Mapoly0028s0130 Marchantia polymorpha HOM05D006442 ORTHO05D007980 3.1e-24 116.3 141 46.1
Sp2g07550 Schrenkiella parvula HOM05D006442 ORTHO05D007980 3.1e-24 116.3 101 52.5
Dinv43911 Davidia involucrata HOM05D006442 ORTHO05D007980 4.0e-24 115.9 116 51.7
Oeu064276.1 Olea europaea HOM05D006442 ORTHO05D007980 4.0e-24 115.9 106 55.7
CDE07G0477 Ceratophyllum demersum HOM05D006442 ORTHO05D007980 5.2e-24 115.5 106 51.9
AUR62023154 Chenopodium quinoa HOM05D006442 ORTHO05D007980 5.2e-24 115.5 132 48.5
SEGI_10267 Sequoiadendron giganteum HOM05D006442 ORTHO05D007980 5.2e-24 115.5 121 46.3
Glyma.15G271700 Glycine max HOM05D006442 ORTHO05D007980 6.8e-24 115.2 124 47.6
Lj3g0007274 Lotus japonicus HOM05D006442 ORTHO05D007980 6.8e-24 115.2 123 46.3
SalBow5G2051 Salvia bowleyana HOM05D006442 ORTHO05D007980 6.8e-24 115.2 88 59.1
MSTRG.28085 Avicennia marina HOM05D006442 ORTHO05D007980 8.9e-24 114.8 116 52.6
CANSAT01G1452 Cannabis sativa HOM05D006442 ORTHO05D007980 8.9e-24 114.8 115 52.2
Peaxi162Scf00045g00327 Petunia axillaris HOM05D006442 ORTHO05D007980 8.9e-24 114.8 116 53.4
HPP92_018950 Vanilla planifolia HOM05D006442 ORTHO05D007980 8.9e-24 114.8 130 48.5
Atru.chr11.2672 Acer truncatum HOM05D006442 ORTHO05D007980 1.2e-23 114.4 102 51.0
AUR62009476 Chenopodium quinoa HOM05D006442 ORTHO05D007980 1.2e-23 114.4 115 50.4
Potri.001G225500 Populus trichocarpa HOM05D006442 ORTHO05D007980 1.5e-23 114.0 122 50.0
SGA_v2.0_scaffold4G02243 Striga asiatica HOM05D006442 ORTHO05D007980 1.5e-23 114.0 117 52.1
Sabra16G0134100 Salix brachista HOM05D006442 ORTHO05D007980 2.0e-23 113.6 122 50.0
Aqoxy1G00188 Aquilegia oxysepala HOM05D006442 ORTHO05D007980 2.6e-23 113.2 117 53.0
arahy.Tifrunner.gnm1.ann1.9R1925 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.6e-23 113.2 109 53.2
arahy.Tifrunner.gnm1.ann1.A55RA3 Arachis hypogaea HOM05D006442 ORTHO05D007980 2.6e-23 113.2 109 53.2
Migut.N01489 Erythranthe guttata HOM05D006442 ORTHO05D007980 2.6e-23 113.2 116 52.6
HanXRQChr01g0018511 Helianthus annuus HOM05D006442 ORTHO05D007980 2.6e-23 113.2 130 46.9
Oeu013593.2 Olea europaea HOM05D006442 ORTHO05D007980 2.6e-23 113.2 106 51.9
Phvul.005G037200 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 2.6e-23 113.2 123 47.2
A06p48230 Brassica napus HOM05D006442 ORTHO05D007980 3.4e-23 112.8 102 50.0
BraA06t27691Z Brassica rapa HOM05D006442 ORTHO05D007980 3.4e-23 112.8 102 50.0
Psat5g207000 Pisum sativum HOM05D006442 ORTHO05D007980 3.4e-23 112.8 116 46.6
EL10Ac2g04436 Beta vulgaris HOM05D006442 ORTHO05D007980 4.4e-23 112.5 102 52.9
Nn2g15582 Nelumbo nucifera HOM05D006442 ORTHO05D007980 4.4e-23 112.5 87 59.8
SGA_v2.0_scaffold10G05439 Striga asiatica HOM05D006442 ORTHO05D007980 4.4e-23 112.5 117 52.1
TAR633G2790 Trochodendron aralioides HOM05D006442 ORTHO05D007980 4.4e-23 112.5 116 52.6
VMungo1080G0430 Vigna mungo HOM05D006442 ORTHO05D007980 4.4e-23 112.5 109 50.5
COL.COLO4_23906 Corchorus olitorius HOM05D006442 ORTHO05D007980 5.8e-23 112.1 118 48.3
Sc14g0005190 Simmondsia chinensis HOM05D006442 ORTHO05D007980 5.8e-23 112.1 120 50.8
Sopen10g011600 Solanum pennellii HOM05D006442 ORTHO05D007980 5.8e-23 112.1 116 50.9
TPR.G12183 Trifolium pratense HOM05D006442 ORTHO05D007980 5.8e-23 112.1 120 47.5
Gohir.A09G099700 Gossypium hirsutum HOM05D006442 ORTHO05D007980 7.6e-23 111.7 106 53.8
Gohir.D09G099100 Gossypium hirsutum HOM05D006442 ORTHO05D007980 7.6e-23 111.7 106 53.8
Gorai.006G116100 Gossypium raimondii HOM05D006442 ORTHO05D007980 7.6e-23 111.7 106 53.8
Lsat_1_v5_gn_8_7620 Lactuca sativa HOM05D006442 ORTHO05D007980 7.6e-23 111.7 120 48.3
PGSC0003DMG400026375 Solanum tuberosum HOM05D006442 ORTHO05D007980 7.6e-23 111.7 116 51.7
BcaC06g31744 Brassica carinata HOM05D006442 ORTHO05D007980 9.9e-23 111.3 102 50.0
CiPaw.12G060500 Carya illinoinensis HOM05D006442 ORTHO05D007980 9.9e-23 111.3 106 51.9
Zm00001eb381670 Zea mays HOM05D006442 ORTHO05D007980 9.9e-23 111.3 130 46.2
BcaC02g10802 Brassica carinata HOM05D006442 ORTHO05D007980 1.3e-22 110.9 102 49.0
C04p24990 Brassica napus HOM05D006442 ORTHO05D007980 1.3e-22 110.9 102 49.0
BolC4t23999H Brassica oleracea HOM05D006442 ORTHO05D007980 1.3e-22 110.9 102 49.0
Rhsim07G0053100 Rhododendron simsii HOM05D006442 ORTHO05D007980 1.3e-22 110.9 118 50.0
CAN.G1110.8 Capsicum annuum HOM05D006442 ORTHO05D007980 1.7e-22 110.5 106 52.8
GSVIVG01032037001 Vitis vinifera HOM05D006442 ORTHO05D007980 2.2e-22 110.2 116 50.9
Nitab4.5_0002012g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 2.9e-22 109.8 119 49.6
Pp3c1_3150 Physcomitrium patens HOM05D006442 ORTHO05D007980 2.9e-22 109.8 116 45.7
Solyc10g037980.2 Solanum lycopersicum HOM05D006442 ORTHO05D007980 2.9e-22 109.8 116 50.9
Ah.16g101020 Amaranthus hybridus HOM05D006442 ORTHO05D007980 3.7e-22 109.4 115 49.6
DCAR_006304 Daucus carota HOM05D006442 ORTHO05D007980 3.7e-22 109.4 116 44.8
Sed0019847 Sechium edule HOM05D006442 ORTHO05D007980 3.7e-22 109.4 93 54.8
AagrBONN_evm.TU.Sc2ySwM_117.1593 Anthoceros agrestis HOM05D006442 ORTHO05D007980 4.9e-22 109.0 127 46.5
SMO244G0064 Selaginella moellendorffii HOM05D006442 ORTHO05D007980 4.9e-22 109.0 117 51.3
AUR62009477 Chenopodium quinoa HOM05D006442 ORTHO05D007980 6.4e-22 108.6 118 44.9
unitig_22.g5766 Utricularia gibba HOM05D006442 ORTHO05D007980 8.3e-22 108.2 92 55.4
THA.LOC104823024 Tarenaya hassleriana HOM05D006442 ORTHO05D007980 2.4e-21 106.7 87 57.5
Phvul.005G038700 Phaseolus vulgaris HOM05D006442 ORTHO05D007980 1.6e-20 104.0 105 45.7
AUR62023155 Chenopodium quinoa HOM05D006442 ORTHO05D007980 4.6e-20 102.4 118 46.6
ECA248G1263 Erigeron canadensis HOM05D006442 ORTHO05D007980 4.6e-20 102.4 87 52.9
Aa31LG8G5740 Aethionema arabicum HOM05D000097 ORTHO05D000041 1.7e-19 100.5 101 44.6
Thecc.01G414800 Theobroma cacao HOM05D006442 ORTHO05D007980 2.3e-19 100.1 106 55.7
QL04p004786 Quercus lobata HOM05D006442 ORTHO05D007980 5.1e-19 99.0 167 36.5
ATR0605G011 Amborella trichopoda HOM05D006442 ORTHO05D007980 8.6e-19 98.2 109 43.1
Glyma.08G152300 Glycine max HOM05D006442 ORTHO05D007980 8.6e-19 98.2 88 52.3
Lalb_Chr25g0283271 Lupinus albus HOM05D006442 ORTHO05D007980 1.9e-18 97.1 101 43.6
CAN.G1076.12 Capsicum annuum HOM05D006442 ORTHO05D007980 2.8e-17 93.2 116 46.6
MBI01_g15755_MAGBIO Magnolia biondii HOM05D006442 ORTHO05D007980 9.9e-15 84.7 84 50.0
CsaV3_3G032370 Cucumis sativus L. HOM05D006442 ORTHO05D007980 2.9e-14 83.2 60 65.0
vmacro13638 Vaccinium macrocarpon HOM05D006442 ORTHO05D007980 1.4e-13 80.9 83 48.2
Ca_27853_v3 Cicer arietinum L. HOM05D006442 ORTHO05D007980 1.9e-13 80.5 70 52.9
CAN.G37.7 Capsicum annuum HOM05D006442 ORTHO05D007980 5.4e-13 79.0 105 41.9
Nitab4.5_0004606g0020 Nicotiana tabacum HOM05D006442 ORTHO05D007980 1.2e-12 77.8 69 53.6
ClCG10G012580 Citrullus lanatus HOM05D002156 ORTHO05D002328 1.6e-12 77.4 45 71.1
Cre07.g315100 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 3.5e-12 76.3 98 39.8
MD02G1317000 Malus domestica HOM05D006442 ORTHO05D007980 3.3e-10 69.7 47 63.8
Cre12.g549500 Chlamydomonas reinhardtii HOM05D006442 ORTHO05D007980 3.1e-08 63.2 147 25.9
CAN.G290.22 Capsicum annuum HOM05D006442 ORTHO05D007980 5.8e-07 58.9 48 47.9
Aa31LG8G5750 Aethionema arabicum HOM05D006442 ORTHO05D007980 2.2e-06 57.0 48 47.9


User provided reference genes

Program Settings