Interactive Phylogenetics Module

Contact Settings

If more than 50 genes/sequences are provided as input, then the associated running time can take some time.
Therefore it is advisable to provide an email-address in case you are running the Interactive Phylogenetics Module with more than 50 genes.
After processing you will be send an email with a link to the created phylogenetic tree.

Data Settings

Reference genes from current instance

The selection modi are exclusive: please choose either Gene selection or Species selection.

Include Gene ID Species Homologous gene family Orthologous gene family E-value Bitscore Alignment Length Identity Percentage
CBR_g4014 Chara braunii HOM05D007646 ORTHO05D004022 6.8e-148 527.3 272 100.0
vmacro05494 Vaccinium macrocarpon HOM05D007646 ORTHO05D004022 1.5e-30 137.5 90 65.6
Os08g0364500 Oryza sativa ssp. japonica HOM05D007646 ORTHO05D004022 2.6e-30 136.7 79 70.9
Solyc02g063300.3 Solanum lycopersicum HOM05D007646 ORTHO05D004022 2.6e-30 136.7 79 72.2
Sopen02g014370 Solanum pennellii HOM05D007646 ORTHO05D004022 2.6e-30 136.7 79 72.2
Haze_14207 Corylus avellana HOM05D007646 ORTHO05D004022 3.4e-30 136.3 90 64.4
Manes.01G114800 Manihot esculenta HOM05D007646 ORTHO05D004022 3.4e-30 136.3 83 67.5
ClCG05G010760 Citrullus lanatus HOM05D007646 ORTHO05D004022 4.4e-30 136.0 114 55.3
SEGI_34374 Sequoiadendron giganteum HOM05D007646 ORTHO05D004022 4.4e-30 136.0 113 56.6
Aa31LG9G17280 Aethionema arabicum HOM05D004323 ORTHO05D004022 7.6e-30 135.2 84 67.9
Carub.0005s1235 Capsella rubella HOM05D007646 ORTHO05D004022 9.9e-30 134.8 91 62.6
Eucgr.F02813 Eucalyptus grandis HOM05D007646 ORTHO05D004022 9.9e-30 134.8 98 60.2
Atru.chr1.1768 Acer truncatum HOM05D007646 ORTHO05D004022 1.3e-29 134.4 83 66.3
Lsat_1_v5_gn_3_83021 Lactuca sativa HOM05D007646 ORTHO05D004022 1.3e-29 134.4 79 69.6
Rhsim10G0078400 Rhododendron simsii HOM05D007646 ORTHO05D004022 1.3e-29 134.4 79 70.9
Sc11g0008560 Simmondsia chinensis HOM05D007646 ORTHO05D004022 1.3e-29 134.4 90 63.3
Zm00001eb042800 Zea mays HOM05D007646 ORTHO05D004022 1.3e-29 134.4 95 61.1
Psat3g096480 Pisum sativum HOM05D007646 ORTHO05D004022 1.7e-29 134.0 93 62.4
ATR0326G025 Amborella trichopoda HOM05D007646 ORTHO05D004022 2.2e-29 133.7 81 66.7
Prupe.3G151500 Prunus persica HOM05D007646 ORTHO05D004022 2.2e-29 133.7 90 61.1
THA.LOC104822453 Tarenaya hassleriana HOM05D007646 ORTHO05D004022 2.2e-29 133.7 98 62.2
PSO478G0345 Papaver somniferum HOM05D007646 ORTHO05D004022 2.9e-29 133.3 87 64.4
QL07p035402 Quercus lobata HOM05D007646 ORTHO05D004022 2.9e-29 133.3 78 70.5
AT5G38060 Arabidopsis thaliana HOM05D007646 ORTHO05D004022 3.8e-29 132.9 94 61.7
TPR.G28547 Trifolium pratense HOM05D007646 ORTHO05D004022 3.8e-29 132.9 94 66.0
BcaB02g08021 Brassica carinata HOM05D007646 ORTHO05D004022 4.9e-29 132.5 92 62.0
HanXRQChr12g0375971 Helianthus annuus HOM05D007646 ORTHO05D004022 4.9e-29 132.5 98 59.2
PGSC0003DMG400010412 Solanum tuberosum HOM05D007646 ORTHO05D004022 6.4e-29 132.1 133 50.4
Cc07_g08290 Coffea canephora HOM05D007646 ORTHO05D004022 8.4e-29 131.7 96 59.4
HPP92_011530 Vanilla planifolia HOM05D007646 ORTHO05D004022 1.1e-28 131.3 79 69.6
AL7G52880 Arabidopsis lyrata HOM05D007646 ORTHO05D004022 1.4e-28 131.0 92 62.0
Ciclev10013088m.g Citrus clementina HOM05D007646 ORTHO05D004022 1.4e-28 131.0 90 62.2
CiPaw.03G067200 Carya illinoinensis HOM05D007646 ORTHO05D004022 1.9e-28 130.6 90 61.1
Manes.02G073800 Manihot esculenta HOM05D007646 ORTHO05D004022 1.9e-28 130.6 83 62.7
MSTRG.3534 Avicennia marina HOM05D007646 ORTHO05D004022 2.4e-28 130.2 97 59.8
Duzib133G1094 Durio zibethinus HOM05D007646 ORTHO05D004022 2.4e-28 130.2 96 58.3
Migut.L00480 Erythranthe guttata HOM05D007646 ORTHO05D004022 2.4e-28 130.2 79 68.4
Lj1g0016280 Lotus japonicus HOM05D007646 ORTHO05D004022 2.4e-28 130.2 79 68.4
Cpa.g.sc116.10 Carica papaya HOM05D007646 ORTHO05D004022 3.2e-28 129.8 90 60.0
PSO017G6311 Papaver somniferum HOM05D007646 ORTHO05D004022 3.2e-28 129.8 82 65.9
Sp7g04020 Schrenkiella parvula HOM05D007646 ORTHO05D004022 3.2e-28 129.8 90 61.1
CARHR214680 Cardamine hirsuta HOM05D007646 ORTHO05D004022 4.2e-28 129.4 83 62.7
Glyma.02G091100 Glycine max HOM05D007646 ORTHO05D004022 4.2e-28 129.4 79 67.1
Hma1.2p1_0283F.1_g113630 Hydrangea macrophylla HOM05D007646 ORTHO05D004022 4.2e-28 129.4 89 61.8
Phvul.008G009900 Phaseolus vulgaris HOM05D007646 ORTHO05D004022 4.2e-28 129.4 79 67.1
Potri.017G122500 Populus trichocarpa HOM05D007646 ORTHO05D004022 4.2e-28 129.4 83 62.7
VMungo1383G0770 Vigna mungo HOM05D007646 ORTHO05D004022 4.2e-28 129.4 79 67.1
BraA07t29660Z Brassica rapa HOM05D007646 ORTHO05D004022 5.4e-28 129.0 92 59.8
Thhalv10027987m.g Eutrema salsugineum HOM05D007646 ORTHO05D004022 5.4e-28 129.0 90 61.1
Gohir.A07G075950 Gossypium hirsutum HOM05D007646 ORTHO05D004022 5.4e-28 129.0 83 63.9
Gohir.D07G080400 Gossypium hirsutum HOM05D007646 ORTHO05D004022 5.4e-28 129.0 83 63.9
Gorai.001G085500 Gossypium raimondii HOM05D007646 ORTHO05D004022 5.4e-28 129.0 83 63.9
Pp3c20_8520 Physcomitrium patens HOM05D007646 ORTHO05D004022 5.4e-28 129.0 124 50.8
BcaC08g44354 Brassica carinata HOM05D007646 ORTHO05D004022 9.3e-28 128.3 91 60.4
Mapoly0026s0130 Marchantia polymorpha HOM05D007646 ORTHO05D004022 1.2e-27 127.9 95 61.1
Sed0004781 Sechium edule HOM05D007646 ORTHO05D004022 1.2e-27 127.9 111 51.4
Aqoxy3G00145 Aquilegia oxysepala HOM05D007646 ORTHO05D004022 1.6e-27 127.5 82 63.4
Lalb_Chr10g0091581 Lupinus albus HOM05D007646 ORTHO05D004022 1.6e-27 127.5 93 61.3
Thecc.04G124000 Theobroma cacao HOM05D007646 ORTHO05D004022 1.6e-27 127.5 79 65.8
arahy.Tifrunner.gnm1.ann1.27TPXA Arachis hypogaea HOM05D007646 ORTHO05D004022 2.1e-27 127.1 93 59.1
arahy.Tifrunner.gnm1.ann1.FGX6FG Arachis hypogaea HOM05D007646 ORTHO05D004022 2.1e-27 127.1 93 59.1
SMO270G0036 Selaginella moellendorffii HOM05D007646 ORTHO05D004022 2.1e-27 127.1 81 65.4
BolC6t36994H Brassica oleracea HOM05D007646 ORTHO05D004022 2.7e-27 126.7 91 59.3
GSVIVG01030896001 Vitis vinifera HOM05D007646 ORTHO05D004022 2.7e-27 126.7 83 62.7
AagrBONN_evm.TU.Sc2ySwM_117.3189 Anthoceros agrestis HOM05D007646 ORTHO05D004022 3.5e-27 126.3 96 57.3
CDE06G1656 Ceratophyllum demersum HOM05D007646 ORTHO05D004022 3.5e-27 126.3 104 52.9
Hund13692 Selenicereus undatus HOM05D007646 ORTHO05D004022 6.0e-27 125.6 79 64.6
FvH4_4g24890 Fragaria vesca HOM05D007646 ORTHO05D004022 7.8e-27 125.2 93 55.9
FAN07G2610 Fragaria x ananassa HOM05D007646 ORTHO05D004022 7.8e-27 125.2 93 55.9
FAN12G1679 Fragaria x ananassa HOM05D007646 ORTHO05D004022 7.8e-27 125.2 93 55.9
FAN17G0138 Fragaria x ananassa HOM05D007646 ORTHO05D004022 7.8e-27 125.2 93 55.9
SGA_v2.0_scaffold329G48872 Striga asiatica HOM05D007646 ORTHO05D004022 7.8e-27 125.2 83 60.2
TWI77G0633 Tripterygium wilfordii HOM05D007646 ORTHO05D004022 7.8e-27 125.2 83 61.4
TAR629G1988 Trochodendron aralioides HOM05D007646 ORTHO05D004022 1.0e-26 124.8 83 59.0
CANSAT54G0187 Cannabis sativa HOM05D007646 ORTHO05D004022 1.3e-26 124.4 92 57.6
DCAR_010731 Daucus carota HOM05D007646 ORTHO05D004022 1.3e-26 124.4 119 52.1
EL10Ac2g04503 Beta vulgaris HOM05D007646 ORTHO05D004022 6.6e-26 122.1 84 59.5
RcHm_v2.0_Chr3g0493581 Rosa chinensis HOM05D007646 ORTHO05D004022 6.6e-26 122.1 79 63.3
Cfa007863 Carpinus fangiana HOM05D007646 ORTHO05D004022 1.1e-25 121.3 112 50.9
COL.COLO4_27123 Corchorus olitorius HOM05D003498 ORTHO05D004191 1.5e-25 120.9 71 70.4
A07p19560 Brassica napus HOM05D007646 ORTHO05D004022 9.6e-25 118.2 115 48.7
Nitab4.5_0000036g0620 Nicotiana tabacum HOM05D007646 ORTHO05D004022 5.3e-23 112.5 78 62.8
C06p17970 Brassica napus HOM05D007646 ORTHO05D004022 1.2e-22 111.3 119 45.4
Medtr7g082970 Medicago truncatula HOM05D007646 ORTHO05D004022 7.1e-20 102.1 167 35.3
Sabra17G0101300 Salix brachista HOM05D007646 ORTHO05D004022 1.8e-18 97.4 156 34.6
Sabra17G0103900 Salix brachista HOM05D007646 ORTHO05D004022 2.3e-18 97.1 157 34.4
CsaV3_3G017630 Cucumis sativus L. HOM05D007646 ORTHO05D004022 4.3e-17 92.8 51 76.5
MBI10_g07293_MAGBIO Magnolia biondii HOM05D007646 ORTHO05D004022 2.8e-16 90.1 52 71.2
Peaxi162Scf00343g00059 Petunia axillaris HOM05D007646 ORTHO05D004022 6.2e-16 89.0 51 72.5
CSS0015077 Camellia sinensis var. sinensis HOM05D007646 ORTHO05D004022 1.1e-15 88.2 51 72.5
Ah.16g101400 Amaranthus hybridus HOM05D007646 ORTHO05D004022 9.0e-15 85.1 55 61.8
Lsat_1_v5_gn_2_60801 Lactuca sativa HOM05D007710 ORTHO05D004022 1.3e-10 71.2 89 37.1
Eucgr.A02986 Eucalyptus grandis HOM05D007710 ORTHO05D004022 2.3e-10 70.5 78 39.7
Cc02_g00160 Coffea canephora HOM05D007710 ORTHO05D004022 7.4e-09 65.5 78 35.9
Nn4g24089 Nelumbo nucifera HOM05D007646 ORTHO05D004022 7.4e-09 65.5 83 43.4
ECA233G0318 Erigeron canadensis HOM05D007710 ORTHO05D004022 9.6e-09 65.1 82 32.9
Nitab4.5_0004530g0090 Nicotiana tabacum HOM05D007710 ORTHO05D004022 9.6e-09 65.1 85 34.1
Nitab4.5_0000021g0800 Nicotiana tabacum HOM05D007710 ORTHO05D004022 2.1e-08 63.9 85 32.9
Actinidia08760 Actinidia chinensis HOM05D007710 ORTHO05D004022 2.8e-08 63.5 77 36.4
Pp3c5_4790 Physcomitrium patens HOM05D007710 ORTHO05D004022 2.8e-08 63.5 81 35.8
CiPaw.06G035400 Carya illinoinensis HOM05D007710 ORTHO05D004022 4.8e-08 62.8 77 36.4
Cfa016067 Carpinus fangiana HOM05D003442 ORTHO05D004005 6.2e-08 62.4 111 31.5
PGR042G1372 Punica granatum HOM05D007710 ORTHO05D004022 8.1e-08 62.0 78 34.6
Prupe.2G328300 Prunus persica HOM05D007710 ORTHO05D004022 1.1e-07 61.6 77 36.4
PSO782G0287 Papaver somniferum HOM05D007710 ORTHO05D004022 1.4e-07 61.2 78 35.9
Phvul.011G019000 Phaseolus vulgaris HOM05D007710 ORTHO05D004022 1.4e-07 61.2 77 36.4
Sp5g19360 Schrenkiella parvula HOM05D007710 ORTHO05D004022 2.4e-07 60.5 85 32.9
DCAR_009023 Daucus carota HOM05D007710 ORTHO05D004022 3.1e-07 60.1 77 33.8
Haze_00383 Corylus avellana HOM05D007710 ORTHO05D004022 4.0e-07 59.7 77 33.8
PSO063G4155 Papaver somniferum HOM05D007710 ORTHO05D004022 5.3e-07 59.3 78 34.6
RcHm_v2.0_Chr1g0384511 Rosa chinensis HOM05D007710 ORTHO05D004022 5.3e-07 59.3 77 35.1
Cre13.g605700 Chlamydomonas reinhardtii HOM05D007646 ORTHO05D004022 1.2e-06 58.2 117 29.9
Hma1.2p1_0649F.1_g195220 Hydrangea macrophylla HOM05D007710 ORTHO05D004022 1.2e-06 58.2 77 33.8
GSVIVG01024345001 Vitis vinifera HOM05D007710 ORTHO05D004022 1.2e-06 58.2 144 25.7
MELO3C021857.2 Cucumis melo HOM05D007710 ORTHO05D004022 1.5e-06 57.8 78 37.2
FvH4_7g34150 Fragaria vesca HOM05D007710 ORTHO05D004022 1.5e-06 57.8 77 32.5
BraA07t30900Z Brassica rapa HOM05D007710 ORTHO05D004022 2.0e-06 57.4 78 34.6
Duzib128G0150 Durio zibethinus HOM05D007710 ORTHO05D004022 2.0e-06 57.4 77 33.8
HanXRQChr04g0105361 Helianthus annuus HOM05D007710 ORTHO05D004022 2.0e-06 57.4 85 29.4
BcaB03g15335 Brassica carinata HOM05D007710 ORTHO05D004022 2.6e-06 57.0 78 34.6
Peaxi162Scf00516g00641 Petunia axillaris HOM05D007710 ORTHO05D004022 2.6e-06 57.0 83 32.5
Sed0013213 Sechium edule HOM05D007710 ORTHO05D004022 2.6e-06 57.0 78 37.2
FAN03G2015 Fragaria x ananassa HOM05D007710 ORTHO05D004022 3.4e-06 56.6 77 32.5
Thecc.05G219200 Theobroma cacao HOM05D007710 ORTHO05D004022 3.4e-06 56.6 89 29.2
A07p32740 Brassica napus HOM05D007710 ORTHO05D004022 5.8e-06 55.8 78 33.3
Aa31LG2G2200 Aethionema arabicum HOM05D007710 ORTHO05D004022 7.6e-06 55.5 77 32.5
CAN.G1131.30 Capsicum annuum HOM05D007710 ORTHO05D004022 7.6e-06 55.5 77 32.5
Mapoly0120s0048 Marchantia polymorpha HOM05D007710 ORTHO05D004022 1.0e-05 55.1 95 31.6


User provided reference genes

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